Cmor013822.1
Basic Information
- Insect
- Cryptocephalus moraei
- Gene Symbol
- bab2
- Assembly
- GCA_946251935.1
- Location
- CAMIUL010000453.1:1363954-1369714[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-16 1.6e-12 47.2 0.2 2 45 346 389 345 389 0.96 2 2 0.24 7.6e+02 0.2 0.5 6 17 468 480 464 482 0.81
Sequence Information
- Coding Sequence
- ATGGGTACCGCACaacagtactgcctccgctggaacaaccaccgttccaacctcctcacggtcttcgacgagctcctccagaacgaggcgttcacggacgtgacgctcgcctgcgagaggggcgcccccatcaagtgccacaggatggtcctcgccgcttgctcgccctatttccagaacctattcaccgatctgccgtgcaagcaccccgtcgtcgtactgaaggacgtcaagtactccgagatcaaggcgatactggagtacatgtaccgcggcgaggtgaacgtcgcccaggaccagctcgccgccctgctgaaggtcgccgaggcgctcaaggtgaagggcctcgtcgaggagaaccgcggccataacaggcggccgaaggacgagccgatggaccactcgccgccctccgtgacgacatcgagccccatcgtcccgcagggcggccacgcgggcggCTCGCCGCCGCACGCGGCGGGCGTCTACAAGGGCTACATGCCGTACGCGGGCGGCAAGCCGTCGCAGGAGTCGCGGCTCGGGCTGCCGATGTGGGCGGTGCCGGGGCTACCGCTGCCGCCGCACAGCTCGCCCGTGCCGAGCGCGAACCACCCGCACGCGGCTGCGATGCTCAACAGCTACGAGACGACGGCCGCTGCGGACATGTGCCCCTTGAAGAGGAAGAAGCTCTCGAGCCTGCTGATGAACAGGGACACGCCGATCCTGAGGACCGTCCTCGGCCAGGGACAGAGCGACTCGCCGCAGCCGGTCAGCCTCGTCTGTCATCCGGACAGCGCGGAGAACTCCAACGGGAACGATGAACGACTGAAGCACATGAAGAACGAGCCGTCCGAGGACGCCCAGTCCCCGTACACGGACTTCACCCCCATGAACGACGAGGAGGACAAATCGAAGCTGGCGATCCCGTCCTCGTCGCCGCAGTCCTTCAGCCACGAGATACGCGGCGTGTCTTCGGGCATCGCGACGTACGTCCCGACGCAGAAGCCGGAATGGAAGCGGTACAAGCAGTACTCGAGGACCGAGATCATGGCCGCGATCGAGGCCGTCCGCAACGGGATGTCCGCCCTGCAGGCGGCCAGGAAGTACAACGTGCCCTCGAGGACGCTCTACGACAAGGTGAAGAAGCTCGGCATCACGACGAGCAGGCCGTTCAAGAGGGGCACGAACGGCAGCTCGACGTGCTTCCAGTACGGCGGCACCGGCTCGCCGTACGGCGGCCACCTCTCCGAGCCGGACGAGGGCGGCGGCGGAGGCGGCGGCGCCTCGATCAACAACAACTCCTCCTCGGCCGCCCTGCTCGAGGCGAGCACGTTCCTGCAGCAGGCGTTCGACGGCAGCAGGGGCGGCGACGAGCGCGAGGCGCTCGCCGCGATGGCGGCGGCCGCGGCCGCCCACGCCGTCGCCTCCGGGCACTCGACGAGCCCGAGCGGCCACGGCGGGCGGGCGAGGAGCCCGAGCCCGAGCCCGACGATGATCAAGTACGTGCGGCACGCTAGCATGACGCCCTCGCCGGCGCCGGGCAGCCACAGCCACAGCGAGACGAACGGCAGCTCGGAGAGGGATCACGATGACGACGAGGACCACGTCGAGGACCTCTCGATCGGCGGCAGCAGGAAGGAGGCGAGGGAGCCGTCGACGAGGGTGATCATGCCGCCGATGAACCAGGTGTCGGCGATCATGAAGAAGGAGGAGATGCTCATCGACGCCCTGAAGGAGGAGGCGGCGGCGGCGCGGCGCGAGGTAAGCGTCGAGTGCGACGGCGAGTGA
- Protein Sequence
- MGTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACERGAPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRGHNRRPKDEPMDHSPPSVTTSSPIVPQGGHAGGSPPHAAGVYKGYMPYAGGKPSQESRLGLPMWAVPGLPLPPHSSPVPSANHPHAAAMLNSYETTAAADMCPLKRKKLSSLLMNRDTPILRTVLGQGQSDSPQPVSLVCHPDSAENSNGNDERLKHMKNEPSEDAQSPYTDFTPMNDEEDKSKLAIPSSSPQSFSHEIRGVSSGIATYVPTQKPEWKRYKQYSRTEIMAAIEAVRNGMSALQAARKYNVPSRTLYDKVKKLGITTSRPFKRGTNGSSTCFQYGGTGSPYGGHLSEPDEGGGGGGGASINNNSSSAALLEASTFLQQAFDGSRGGDEREALAAMAAAAAAHAVASGHSTSPSGHGGRARSPSPSPTMIKYVRHASMTPSPAPGSHSHSETNGSSERDHDDDEDHVEDLSIGGSRKEAREPSTRVIMPPMNQVSAIMKKEEMLIDALKEEAAAARREVSVECDGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00392845;
- 80% Identity
- iTF_00391992;