Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776662.1:3320450-3323947[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.1e-06 0.00019 21.8 1.7 1 23 247 269 247 269 0.98

2 9 2e-08 1.8e-06 28.2 1.6 3 23 277 297 275 297 0.98

3 9 0.00021 0.018 15.6 0.5 1 23 303 325 303 325 0.98

4 9 8.7e-07 7.6e-05 23.0 1.5 1 23 331 353 331 353 0.99

5 9 1.5e-05 0.0013 19.1 1.7 2 23 467 488 466 488 0.96

6 9 2e-09 1.7e-07 31.4 1.6 1 23 494 516 494 516 0.98

7 9 0.0021 0.19 12.4 0.5 3 23 524 544 522 544 0.97

8 9 6.8e-05 0.006 17.1 3.2 1 23 550 572 550 572 0.99

9 9 0.013 1.2 9.9 0.8 1 23 578 602 578 602 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.1e-06	0.00019	21.8	1.7	1	23	247	269	247	269	0.98
2	9	2e-08	1.8e-06	28.2	1.6	3	23	277	297	275	297	0.98
3	9	0.00021	0.018	15.6	0.5	1	23	303	325	303	325	0.98
4	9	8.7e-07	7.6e-05	23.0	1.5	1	23	331	353	331	353	0.99
5	9	1.5e-05	0.0013	19.1	1.7	2	23	467	488	466	488	0.96
6	9	2e-09	1.7e-07	31.4	1.6	1	23	494	516	494	516	0.98
7	9	0.0021	0.19	12.4	0.5	3	23	524	544	522	544	0.97
8	9	6.8e-05	0.006	17.1	3.2	1	23	550	572	550	572	0.99
9	9	0.013	1.2	9.9	0.8	1	23	578	602	578	602	0.95

Sequence Information

Coding Sequence: ATGGAGAGGCCCCAAGGGCAATGGGGTCCGGGGCCGGGATCTCTCCAGGACGGAGGACTGTAcccgcagcaacagcaacaacagcagcaacagggCTCCTCGTCCTCCGGTAGTCCGCAGCAGGCCTGTGGACCCCCGGTCGAGGGGGAGAGCGGCCCCCCGCCTTCGTTGGCCTCGCCGGTGCCCTCGCCGTACCCTTCGGCGCCGCCCGAGCCTCAAGCCCTCACGCCACCGGACGACGACATACAATCGAACCAGGCCACctcccagcagcagcagcaacagacCCAACAACAGGtccaacagcaacagcaacaacagcagcaacaacagcaacagcaggttcagcagcagcaacagcaacagcagggGGGCCAGCAGGACCACtcgccgcagcagcagcagcagcaactcTCGGCGCACGACGTGGACCGGAGCGATTGCTTCCCGGGTGCCGGCGAGCTGCAGCAATACCCGCAGCACTACTTCAAGGAGACGAGGCCCCATCCGGCGCCGTCGGTGCCGCCGCACATGCTGACGCCCGGTGGGTTCTCGGCGCTACACTATCTCAAGCAGCCCGGGGTGATGCTGACTTCCCTCGGCCAGGGGGACGGCGGGCCCGGCCTCGACGGGCACCAGTACGCGAGCCCCGGTGGGCCCAACATGAGCACCGGCCTCCCCGACATCGTCCAGCAAAGTGGTAAATCGTCCAAGGGCGCGAATAGTGACCTCCGGCTGTTCAAGTGTTTGACGTGCGGCAAAGATTTTAAGCAGAAGTCGACTCTGCTGCAACACGAGCGCATCCATACGGACAGTCGGCCGTACGGGTGCCCCGAGTGCGGGAAGCGGTTCAGGCAACAGTCGCACCTAACGCAGCATCTCCGCATACACGCGAACGAGAAGCCGTACgcttgcgacttctgcgagcGCACGTTCCGGCAGCGCGCCATCCTCAACCAGCATCTGCGCATCCACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGACGTGAGTCCGCACCTAATCTTTAAGAACGGGATGACGCCGACCCTCTGGCCGCAGGACGTCCCGTTCCCGCCGGAGGAGGGGAAGGAGGAGGTGGCGTCGACGTTCGGCGACACGGACACGCAATCGGGCGCCTTCAGTCCGGCGCCGGACGCGAATTCGATCCAGTACGCGGCGTACTTCAAGGACCCGAAGGGCGGGAACCACGCGGTGTTCGGCGCCGGGGGTTCAGGTAGCTTCGGGGCCCTCCAGTACATAAAGCAGCAGGGTGGTACCAAGAGCTGCCTGCCCGACGTGATACAGCACGGGCGCTCGGCCGGGATGCCGCTCTACGTGCGCTGCCCGATCTGTCAGAAGGAGTTCAAGCAGAAGTCGACCCTGCTGCAGCACGGCTGCATACACATCGAGTCGCGGCCGTACCCCTGCCCGGAGTGCGGCAAGAGGTTCAGGCAGCAGTCCCACCTCACCCAGCACTTGCGCATCCACACGAACGAAAAGCCGTACGGCTGCGGCTTCTGCGGGCGCAACTTCCGCCAGCGCACGATACTCAATCAGCATGTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGCCACCAGTGCGGCAAGGACTTTCGTCAGAAGGCGATCCTGGACCAGCACACGCGCACCCACCAGGGCGACCGGCCGTTCTGCTGCCCGATGCCCAACTGCCGGCGGCGCTTCGCCACCGAGCCCGAGGTCAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCCAAGGTCCGCCGGAACTCGAGCAGCGACACCAAGCCGCCGGGCACGCCGGCGGGCCACGGGCCCCTGCCGGTCCCGCGGGGCCTCACGCCCGCCGTCGTCAAGCCCGAGCTCTACTTCCCGCAGTGCTACGCGCCCGCCTTCAACCACCAGCCGCCGGTCTCGACGGTCCAGTTCCAGGGACAGGCGAACGGGGTGTCGGTCGCCGGCGAATTCAAGCCACCGACCGGCCTCCCGCCCCAGTGA
Protein Sequence: MERPQGQWGPGPGSLQDGGLYPQQQQQQQQQGSSSSGSPQQACGPPVEGESGPPPSLASPVPSPYPSAPPEPQALTPPDDDIQSNQATSQQQQQQTQQQVQQQQQQQQQQQQQQVQQQQQQQQGGQQDHSPQQQQQQLSAHDVDRSDCFPGAGELQQYPQHYFKETRPHPAPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPGLDGHQYASPGGPNMSTGLPDIVQQSGKSSKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACDFCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEEGKEEVASTFGDTDTQSGAFSPAPDANSIQYAAYFKDPKGGNHAVFGAGGSGSFGALQYIKQQGGTKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCGFCGRNFRQRTILNQHVRIHTGEKPYKCHQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKVRRNSSSDTKPPGTPAGHGPLPVPRGLTPAVVKPELYFPQCYAPAFNHQPPVSTVQFQGQANGVSVAGEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684322;
90% Identity: iTF_00684322;
80% Identity: iTF_00391294;