Basic Information

Insect: Crossocerus cetratus
Gene Symbol: Hr39
Assembly: GCA_963675795.1
Location: OY776664.1:8135634-8139080[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.44 2.8e+03 -2.5 0.8 117 152 48 80 32 108 0.53

2 5 1.7 1.1e+04 -4.4 11.2 44 163 273 388 253 414 0.45

3 5 0.58 3.8e+03 -2.9 1.9 82 140 416 444 373 475 0.41

4 5 1.1e-07 0.0007 19.2 0.1 1 21 568 588 568 602 0.91

5 5 5.6e-70 3.6e-66 224.4 0.2 202 408 706 907 666 907 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.44	2.8e+03	-2.5	0.8	117	152	48	80	32	108	0.53
2	5	1.7	1.1e+04	-4.4	11.2	44	163	273	388	253	414	0.45
3	5	0.58	3.8e+03	-2.9	1.9	82	140	416	444	373	475	0.41
4	5	1.1e-07	0.0007	19.2	0.1	1	21	568	588	568	602	0.91
5	5	5.6e-70	3.6e-66	224.4	0.2	202	408	706	907	666	907	0.95

Sequence Information

Coding Sequence: ATGCCGGAAGAAAACGGAGTCAGTGAAGGGTCAGGGGCAGGACCTGGGCCTGGGCCAGGATCCTCGACTCCTGGCTCGGAGTTGGGATCGCGAGCGGGACCCACCGCTCCCGGTTGGTGGCCGGCGGTCCAGCCCTGGAAGGCTTCCAACAGCAACATAACTGTGTCCTCGCCGGGCTCCACCTCGCAATCCTCTGCTACTTCCAACCCTTCGTCTTCCATTGGGCAATCCTGTACTGTCAATTTGCAGCGCTCGATCGAGGCTGGCAAGAATGTCTCGGTAACAACCATCAACGCGCCCGCTCAAGATATGCAAGAAAGCAAAGGAATCTGTAAATATCTTGGAGGGCAGAATGGCGTGACGGTGTCGGTGGTGTCGACCTGCAGCTCCGGAGTGTCCAGCAGCGCTGGTTCCCACAACCTTGGCATAACCGTGGGCGTCCAGGGCTCCGAGGGCAACGAGGACGACAGCGACGCCGAAATCAGCAAGATCGACTTCCGCGGGGTGAATCTGCGCACGAAGAAGAAAAGCGCCTTCCCGGAGAAGATCGACGAGAAGGAGGCCGACGCCGAGCGCTCCACCACCAGTGATATTATTCAGCAGCAGCAACCCGAGAGGCCGATGTCATGGGAGGGCGAGTTGTCCGATCAGGAAATGTCCTCGAATACTATCACGAATCAGgacctagacgAAGAAACTTCTATGGAGGGAGTGCAAGTGTGCAGCACGCCCGGTTCAACGGAGCCGAAATTCCCCGTAAAACCCGAGCCAGACTTCCGCTCCAATCCAGGATTCACTTTCGGTTCTTTCATCCAAACAAACCAAGCCCAACTACAAGGCCAACAAgtgcaacagcaacagcaacaaacCACCATCGAGAATCTTGAACAAACACAGCAGAGTGATTTGCCTCTTCTCGTTGGGAAGCTTCTCGGTGGATACAACAGCTCCACGCCGAATCAGAGCCCTGTTCTCAACCCGCGACATCATTTAGCCAAACACAGCCACACGAGATCGCAGGTTCCATCTCCGGACTCGGCGATCCACTCAGCGTATAGCGTGTTCAGTTCTCCGACGCAAAGTCCGCACGCGGCGCGACACTCGGCCCTCAGCGGAGGGAGTCCCGTCCCATCGTCTTCTCTGTCGCTCTCGCGACACAGTTTCAACAATTCAACGTCGTCCCTGTCCCTCTCGCTATCCCACTCGCTCTCGAGGAACAATTCGGACGCGTCGAGCAGTTGCTACAGTTACGGCTCGCTCAGTCCGCCGACCCATTCGCCTGTCCAGCAGCCGAGGCATCCGCACTCTCAACATCATCAACACCCCGCGCAGAGTAGTTCGCTTCATTTGTCCTCGGCGCCAAGCGTCGGCGGCCACTACTCGACAGCAGCTCCGGAGCTCTCGCCCGAAGGTCACCCTGAAGACACCGAGGACTGTCGGATCCCCTCAGTTCCTTCTGGTATTTCGACGCGGCAACAGTTGATCAACAGTCCCTGTCCGATCTGCGGTGACAAGATCAGCGGCTTCCACTACGGGATCTTCTCCTGCGAGTCCTGCAAGGGCTTTTTCAAGCGAACCGTCCAGAACCGGAAGAACTACGTGTGCCTTAGGGGCGCGGGCTGCCCCGTGACGGTCGCGACCCGCAAGAAGTGTCCGGCCTGCCGCTTCGACAAGTGCCTGAACATGGGCATGAAACTGGAGGCAATCAGGGAGGATCGAACCCGAGGTGGACGCAGCACCTACCAATGTACTTATGCTCTGCCGTCGAACCTGGTTGGAACGGCGGGGAACAGCGCGGCCAGTGAAAAGGGCAGCTGCAGTCCCGCGCAGGGTGGCGAGCATTATTCGGGCAAGTACCACTCGAACCACTCGCACAAGATGCAGGTGGTGCCGCAGCTCCTCCAGGACATCATGGACGTCGAGCACCTGTGGCACTACAACGACAACGACCGGATGACGAGCGGCCAGGGCCTGAACAGGCGGGGACCCGCGAAGAGCGAGGAGGTAAGCGCGAGCAACGACCACCCCGACGAGTCCAACAGTATTGGGAACAGCAATTCGAGTAAGGCGGAGACGCCGAGCCTCGACGGCGGGAACGGCGAGATGAGCAACGGCAATCCGACCCAGCATCCTGACTTCCTCTCGAATCTCTGCAACATCGCCGACCACCGTCTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTATTCAAGAACATCTCCATCGACGATCAGATCTGTTTGCTTATTAATTCCTGGTGCGAGCTGCTGCTGTTTTCATGCTGCTTCCGGAGTATGAGTACTCCGGGGGAGATTCGAGTGTCGCTTGGCAAGTCGATCACTTTGGAGCAGGCGAAGCAGCTTGGGTTGGCTACTTGTATCGAGAGGATGCTGGCGTTTACAAATAATCTGCGACGGCTGAGGGTGGATCAGTACGAGTACGTCGCCATGAAAGTAATAGTCTTATTGACTTCCGACACGAGCGAACTGAAGGAACCGGAAAAAGTGCGGGCGTCCCAAGAGAAAGCCTTGCAAGCATTGCAACAGTACACGATTTCAAGATACCCGGAGATGCCAGCGAAATTCGGCGAGCTCCTCTTGAGGATACCTGACCTGCAGAGAACGTGCCAAGCAGGAAAGGAATTGCTGAGTGCGAAACGCGCCGAGGGCGAGGGAAGTTCGTTCAATTTGTTGATGGAATTATTGCGAGGAGATCATTGA
Protein Sequence: MPEENGVSEGSGAGPGPGPGSSTPGSELGSRAGPTAPGWWPAVQPWKASNSNITVSSPGSTSQSSATSNPSSSIGQSCTVNLQRSIEAGKNVSVTTINAPAQDMQESKGICKYLGGQNGVTVSVVSTCSSGVSSSAGSHNLGITVGVQGSEGNEDDSDAEISKIDFRGVNLRTKKKSAFPEKIDEKEADAERSTTSDIIQQQQPERPMSWEGELSDQEMSSNTITNQDLDEETSMEGVQVCSTPGSTEPKFPVKPEPDFRSNPGFTFGSFIQTNQAQLQGQQVQQQQQQTTIENLEQTQQSDLPLLVGKLLGGYNSSTPNQSPVLNPRHHLAKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALSGGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSQHHQHPAQSSSLHLSSAPSVGGHYSTAAPELSPEGHPEDTEDCRIPSVPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYALPSNLVGTAGNSAASEKGSCSPAQGGEHYSGKYHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMTSGQGLNRRGPAKSEEVSASNDHPDESNSIGNSNSSKAETPSLDGGNGEMSNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQAKQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTISRYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633666;
90% Identity: iTF_00391331;
80% Identity: iTF_00391331;