Ccet015490.1
Basic Information
- Insect
- Crossocerus cetratus
- Gene Symbol
- retn
- Assembly
- GCA_963675795.1
- Location
- OY776670.1:15811385-15852507[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8 1.4e+04 -3.4 0.0 69 82 188 203 177 204 0.69 2 2 6e-26 1.5e-22 79.9 0.0 2 89 210 295 209 295 0.96
Sequence Information
- Coding Sequence
- ATGCCGCGCAACGACGGCAAGGCGCTTTTTATATTCCTTGGAGAAAAAGTGGCTTCCCACCAAGAGGAGGACCTGTCGGACCCAGACCTCCAGgacgaggagagcggcgaggagtTGCCTCAGCAGCCGCTGCCGAGtaacccgctctcctcctcggagACGAGTAGCGCGCCGACCAGCACAGCCACCCCACTCTCCCACTTGAACAGCCTGATGAGCGCGCATCATCCGCACTTCCTCGCCAAGGTTAAAATGGAGACGGACGTGGACACCCTGAGCAACAAGAGCGGCCTCGAGGCGTTGCAGGCGGCGATGGGTGGCGGCGGTTGCTTCAACCTGCCGTTCTCCTTCCCGCCGCCGGCCGCCTTCCTCACGCCGCAGCATCACTCGCAGAACAGCCACCCGAGCTCCGGCTCCCTCAACAACTCGAGCGGCAATCAGGTGACCTCGTCGGCGAGCTCGCACTCGAGCGAGTCCTCGCAGGGCAGCGCGCGCAACGGCGGCGAGACCCGCGAGAGCAACAATCACGGCCAGAACAGCAACAGCGGCTCGAACCATCAGCAGCAGACCAGCTGGAGCTTCGAAGAGCAGTTCAAACAGTTGTACGAGATCAACGATGATCCCAAACGGAAGGAGTTCCTTGACGATCTCTTCAGTTACATGCAAAAACGAGGAACACCCATCAATCGGTTACCAATTATGGCCAAGTCGGTGCTGGACCTCTACGAGCTCTACAATCTCGTCATAGCCAGAGGTGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGGCTCCACCTGCCCTCGAGCATCACTTCCGCTGCGTTCACACTGCGCACCCAGTACATGAAGTATTTGTATCCGTACGAGTGCGAGAAGAGGAGGCTGTCGACGCCGGCGGAGCTGCAGGCTGCGATCGACGGGAACCggagggaagggaggaggagcAGTTACGGGGCGTACGCCGGGAGCGGTGCCGGTGGCGAGAGCCTGGTCCAGAGGAACCCACACTCGCAGAGCTCGCTGGCCTTGCACGCGCAAATGTCACCGCTGTCATTGGTGACGGCGGTGGCCGCCGGTGGGCAGCATCATGTGCCGCAGTCTCTGGTGAACGGCAGCGCGGCACACACACCCTTGCCCCACCATCCCCACCATCCGCAACACCCTCAAGGACCCCTTGGCCAGCCAGCCAATACCGGACCGATCCCTGGTATGGCACCGTCAGAATTCGAGGCACGCATGGTGGAGTATGTGAAACTGTTGAACAAGGAGTTGAGGAGTGCGGGAGCGGGCACACCTCCGCCGATGATCCATCGGCAGGGCAGCGCATCACCTCCCTCCTCTACACCACCGAGGGACGGCGCATTCAGTGCACTGGAAATGTCTCGGATCACCCTATGGAATATGTATAACAATAACACCCTCTATCCGGGAGTGGCGCACCAGCCCCCACTTTCCCCCCAAGCCTCGCGTTCGCCTGTCCCGCCGACTTCCAGTCCGGAACCTCAAAGGGAAGCTCTCGACTTGGGACTGAGGTCTTCGCCAATGTCCTCGTCGCCGGTCAGGCAGAGTCCACCCACGTCTGGCGGTGGTATCCACGTGAAGAGGGACCAGGATCTTACTGGGACGCCGGGACCCCCACCTGCCAAAAGGTTACTATCCGACGACGAGAGCCCTATCGACCACAAAGTTACGGCCTCCGTCGGCACGCACATCAAAATTTCCAACCGTGGAGACGGAAGAAATGGGGACAATTCGTTGGTAGTCAGTATGGAATTAAATGGGGTCATGTACCAGGGTGTTCTGTTCGCTCAGACGGATAATAGGAGCACGTCGAATGCAatgaccaacaacaacacaAAAACACCGCGGAGTGTTGTCTCGTGA
- Protein Sequence
- MPRNDGKALFIFLGEKVASHQEEDLSDPDLQDEESGEELPQQPLPSNPLSSSETSSAPTSTATPLSHLNSLMSAHHPHFLAKVKMETDVDTLSNKSGLEALQAAMGGGGCFNLPFSFPPPAAFLTPQHHSQNSHPSSGSLNNSSGNQVTSSASSHSSESSQGSARNGGETRESNNHGQNSNSGSNHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGSGAGGESLVQRNPHSQSSLALHAQMSPLSLVTAVAAGGQHHVPQSLVNGSAAHTPLPHHPHHPQHPQGPLGQPANTGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDGAFSALEMSRITLWNMYNNNTLYPGVAHQPPLSPQASRSPVPPTSSPEPQREALDLGLRSSPMSSSPVRQSPPTSGGGIHVKRDQDLTGTPGPPPAKRLLSDDESPIDHKVTASVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDNRSTSNAMTNNNTKTPRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- iTF_00633414;
- 80% Identity
- -