Celi010215.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- iec1
- Assembly
- GCA_907269065.1
- Location
- OU026068.1:17060378-17068509[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.06 4.7 8.5 2.0 2 21 499 518 498 522 0.89 2 11 0.0049 0.38 11.9 5.2 1 23 536 559 536 559 0.97 3 11 0.12 9.1 7.6 2.3 1 22 564 585 564 588 0.89 4 11 0.012 0.91 10.7 0.1 2 21 639 658 638 659 0.95 5 11 1.5e-06 0.00012 23.0 0.8 1 23 718 739 718 739 0.98 6 11 0.0002 0.016 16.3 1.9 1 23 745 768 745 768 0.96 7 11 0.19 14 6.9 0.5 2 21 789 808 788 809 0.89 8 11 0.59 46 5.4 1.9 1 23 818 842 818 842 0.97 9 11 0.36 28 6.0 6.9 1 21 851 871 851 873 0.94 10 11 0.0029 0.23 12.6 2.3 1 21 879 899 879 904 0.92 11 11 0.0065 0.51 11.5 3.7 1 23 910 933 910 933 0.94
Sequence Information
- Coding Sequence
- ATGCTGTCTCCACGTGAAGATGACGACGACGACACTCACTTGTGCATCAAATGCAACACCACCATTGTTGGCTTGGACAACTACGTCAAGCACAGGAAGGATCGATGCGGCAAAACAAAAACCATAATTGGAAACAAGACTGATCTTCCACCCATCGACTCTTTAGACCCCACTTACAGCTTAGGAGCTGATGTTTTCTTCCAATCTTTAGAATTGCAAAGCAGTGTCAAGAAAACCTCCTTGTCGAGGCTAACTCCTCCCATTCTACCAATCTCAAAACCTAGTATAGACAGGAAAAGCTGTTTAGCCATTGCATCCACGTCAAGGGATATCCCTCGAATGAGCCCACTTGAAACCAATCTTAGAGGAGAAGACTGGATAGGAGGCCATACGCTCAGAATAAGTGGCAGTGAAGATAATCAGACGAAGCTAATAAATGCCGTTGCAAGTATCAGTGGAGCTGCCAAGAAGGAAACCAGTTCGTCGTACTCAATAGGGTACAACGATTATAAAGGCGACGATGAAAGTGATGAATCTGATGATTCAGAAGAAGATGACGAGGAGGAAAATATTACTTGTGGGAAGTGGAAACCATCTCCAAATTATACGGGAGGTAAATGGCGTCCTGCTTCACCAGACCATGAATGGGATGACCAAGAACATACGGCTACGTGGAAAGCTCTCCTGCCTGAAGTTGATCGTGATGAAGACTATGATGTTCCACCACCAGGACACACTAAAGGTAAATGGATTCCAGGGGCTAACGAAAAAACACAAATCATGCAAACAACTATACAGACAAAAGGATCTGTCCAATATTGGTGTGGTCCTTGCAACAGAAGACTGGGTTCTCGAGCTATTTACGATAAGCATTTAAGATCCAGTTTGCATTTAAAAAAAGTGTTGCCTGAACATGAACTGGAATTCTCTGGACATTTAGATCCTATGAAGATAGGCGAAAAACGAACAACAAGACCATCCAGGTTTGTAGATGACGGCATTTACTTACAAGTTGAAAGAAAAAAGAGACAGAAGAAAAGCGTAAAGTTAAATGTTAAAATTGAATCTAAGAAGAGAAAACGGAAAGCTACCTTCGTCCACTGCGCTGGTTGCAAATCTCGCGTGAGGGAACATTTGATGGGGAAACATCTGATATCTCATTACCACTTTAGAAAGGCAACCGGTGTAACAAGTTCCGTATATCAACAGCTAATTTTGGATAATATTGAAGCCGTCGTTCATCAATCTCCGTTTCAATGCAGTCCTTGCAAGTTTTACACCAACTGGCTTCCCAATTTTATGCATCATTGGTACTCAGAAGAACATGAATGGAAAGTGGCGTTTATTGAGGGGAATTTCTGGTGTTCATTTTGCAAGTTCGAATGTGGGAGTTCTCAAGAAATGCTGCTGCATATGTCTAGTTCTGACCACAGCGAAGTTGTAGCAGTGATTAATAGATCGATGCCTATTATCATCCGAAAGAAAACAGTACTAAAGTGTGAGACATGCTCTGAAATTTTTCGGTATAATTTAGAATTAAAAAAGCACAGCCATAAAACAGGTCATCCGATGTCATACACAGCAACTGATACCTATCAAGAACTGCACAAATGTCAGCATTGTAAAGCTAAATTCAAAACTTCGCTGACTCTTGCAGCCCATTTGAAGTCAAGACATAAACACAAAACTCACATTTGCCTGGTCTGTTCTAAGAACTTTGACTCTTCAGAAGAGGCTAAGCGTCATCGTCATTCATCTGAACATAGAATTAATCGCAAAGAAATGTTAATGAAGCAGGGCGTTATAACGAAAGATTTGAGGAAAAAATGCCCGTATTGTCCAGGTGATGTTATGATGAAGAATATTTTAGTTCTGAAGGAACACATTAGGTTATTTCATCCTGATATAAAAAAATCGTGTCCTAAATGCGGTATGGAGTTCATCTTTTCGCAAGAAGTAACTAGCCATATAAGAGCCAAAGCGTGCAGATTTCAAGCGACTAAAAGAGAAGATTCTTCAGATTTCTGGAACTGCAGCCAGTGCCTCTTCACTACCGACTCTCAGGCTGAGTGTTACTTCCATGAAGTCCTGCATGAACCTCCAAAAACGGAGGTTAAAAAAGTTGGTGACATAGAAAAGGTTCTCCAAAAGTACACCTGTCCTATATGCCCGAAAAGCTTTAGGAAAGCATCGTTGAGACAGCATTTGAGACAGCATACATTCGAGAGGCCGTTTGTTTGTACCATCTGCAACGCTAACTTCACCCGGCAGACCAGTCTAAGCAACCACGTGAAGCACGACCACGGGGATAACGCGCAGAAGATGCCTAAAGGGCTGACAGCAGTCGAAGGCATGAAAGAGTGGAGTTGTGATAAGTGCTTAAAAAGCTTTCCTGACAAGGCGCCACTATCCGGCCATACCTGCAGTGAAAACTTCCCTGCTTTGAGTGAACATAAGTGTCACCTTGAAGAGTGTTCTTTTGTCACCGCGAGTGCCGTCCGACTTGCCAAACATGAGAAACGACATGGACTAACTGGAATAGAACAACGCCACAAATGTCCACAGTGTCTCTTCAAAAGCAACCAGGCCAGTCATTTGAAAAGGCACTTGCAATGCCACAAAGGAGACAAACCTTACGCCTGCCCGCATTGCGATTTTACTTGTGGAAGTTTGGAAAATCTTCGCAAGCACGTGCTCCGTAGTAGCCGCCACAAAGACGTCTTTCTGTACCACTGCAAGCATTGTGATTATAAAACTAACTTGGCATCGGATTTACGTAAGCATTTGGTCAGCGACCACAGCAGCGAATATAATGTGGTAACTGCTATGCAAGCAGCTAAAACGCATTTGGTGAAGAACTCTTAA
- Protein Sequence
- MLSPREDDDDDTHLCIKCNTTIVGLDNYVKHRKDRCGKTKTIIGNKTDLPPIDSLDPTYSLGADVFFQSLELQSSVKKTSLSRLTPPILPISKPSIDRKSCLAIASTSRDIPRMSPLETNLRGEDWIGGHTLRISGSEDNQTKLINAVASISGAAKKETSSSYSIGYNDYKGDDESDESDDSEEDDEEENITCGKWKPSPNYTGGKWRPASPDHEWDDQEHTATWKALLPEVDRDEDYDVPPPGHTKGKWIPGANEKTQIMQTTIQTKGSVQYWCGPCNRRLGSRAIYDKHLRSSLHLKKVLPEHELEFSGHLDPMKIGEKRTTRPSRFVDDGIYLQVERKKRQKKSVKLNVKIESKKRKRKATFVHCAGCKSRVREHLMGKHLISHYHFRKATGVTSSVYQQLILDNIEAVVHQSPFQCSPCKFYTNWLPNFMHHWYSEEHEWKVAFIEGNFWCSFCKFECGSSQEMLLHMSSSDHSEVVAVINRSMPIIIRKKTVLKCETCSEIFRYNLELKKHSHKTGHPMSYTATDTYQELHKCQHCKAKFKTSLTLAAHLKSRHKHKTHICLVCSKNFDSSEEAKRHRHSSEHRINRKEMLMKQGVITKDLRKKCPYCPGDVMMKNILVLKEHIRLFHPDIKKSCPKCGMEFIFSQEVTSHIRAKACRFQATKREDSSDFWNCSQCLFTTDSQAECYFHEVLHEPPKTEVKKVGDIEKVLQKYTCPICPKSFRKASLRQHLRQHTFERPFVCTICNANFTRQTSLSNHVKHDHGDNAQKMPKGLTAVEGMKEWSCDKCLKSFPDKAPLSGHTCSENFPALSEHKCHLEECSFVTASAVRLAKHEKRHGLTGIEQRHKCPQCLFKSNQASHLKRHLQCHKGDKPYACPHCDFTCGSLENLRKHVLRSSRHKDVFLYHCKHCDYKTNLASDLRKHLVSDHSSEYNVVTAMQAAKTHLVKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00927058;
- 90% Identity
- -
- 80% Identity
- -