Basic Information

Insect: Crioceris asparagi
Gene Symbol: -
Assembly: GCA_958507055.1
Location: OY293826.1:69011963-69013732[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-08 7.8e-06 27.0 0.0 1 41 15 55 15 57 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-08	7.8e-06	27.0	0.0	1	41	15	55	15	57	0.97

Sequence Information

Coding Sequence: ATGCCAAATAAAAGGAAACggattacagaaaaatgttcatgGTCAGAAGAATCCATGAAGTCGGCTTTGGAAGCTGTCGAAAATGGAGCAGCACAAAGAGAGACTGCACGTCGTTTCAACGTACCTTTAAACACATTACGAGATAGAATAAAGAAAGGTCATTATTATCCTGCAAGGATGGGAGCTCGAACAGTTTTTACGGAAGAACAAGAAAACGAAATTTGTCAACATTTGCTGcatttgtcaaaaatgttttttggttTAACTCCCATCCAGACTCGACAAGCTGTTTTCGAGTATGCTGCAAGGAACGCCATacctaacaaatttaataaagataGGAAGATGGCGGGTAAAGACTGGATGTCTAGTTTTCTTAAAAGGCATCCCAATCTCAGCTGCAGAAAACCTGAggctacatcaattaaccgtaTTACAGGTTTCAACAAGGACGAAGTTGACAGATTTTacgaaaatttaatttctttgatgGAAAAGTACAAATTTGGACCAACTCGCATATTTAACGTAGACGAGACTGGCATCACTACAGTCCACAAGcctacaaaaattattgctgGCAAAGGAGTTAAGCAAATCGGTATTGTGACAAGCTGGGAAAGGGGAAAGAACGTCACCGTTTGTTGTTGCATGAGTGCAAGTGGCAGTTTTACACCACCTTTATTCATATTTCCCCGCCTCAGAATGACTCCTTCTCTTGAAAGAAATGGTCCACCAGGGTCTATCTACAAATGTACGAAGAATGGATGGATGACCGAGGAAGTTTTTCACATGTGGCTTCAGCATTTTGTTAGTACAAATAAACCAACCAAAGAAGATCCAGTCCTATTAGTTCTGGACAACCATTGCAGCCACATATCTCTCAGAATTTACAACTTCTGTAGGGAGAATGGTGTCGTGTTATTGTCTTTACCTCCACATTCTTCAAACCGTATGCAACCGCTTGACCTAACATTCTTCGGACCACTTAAGAAAGCATATGATATAGAGTGTGATCTATTCATGAAATCAAAcgcatatgaaaaaataacaatgtatGACATCGcgcaattattttctaaatcttatATGAGAGTTGCTAACCCTTCTAAGGCAATTAAAGGATTTGAAGTCTCTGGAATATATCCAATCAACCGCAATGTTTTCTCTGAAGAGGATTTTTATACTTCATCTAAtgaaaatgcgtcattttctaGATCGCCTCCTCAACGAAGCATCTCAAAAGACCAACCAAATTCTTCATCTGATCAATTAGGTCTCTCAGCACCAACAGAAACGTCTTTTCATGATATAACTCCGCTTCCAAAGAAAGTTTCTTCTATGAATGGCCCCAAACAGAATCGTAAAAAGCAGAGATCTGAAATTCTCACATCAACGCCTTTAAAGGAACAGCTAGAAATTGCCGAGctcaaaagaagagaaaatgaaaGGAAGAAAATGGAAGCGGCATGCAAGAAAAAAAAGGGAAAGTTGGTAAAGGATAACGTGAGAGTCAAGACTGTTAAAAGAAGAATAGTAGAATCATCAAGCAATACTGATGTTAGTGAATCTGAGATTTGCAATGACGATGAACTAGACGAGGCTGAAAATATCGAAGGTGATGAAATCTGTATTATTTGTCGGGAATATGGTAAAGATGAAGAATGGTATCGTTGCGTTTCCTGTGGACACTGGGCCCATAAGTTATGCACCGGATATGATAGTCCTAAACACTATATTTGCGACTACTGCCCAGGTTTACAGCACTGA
Protein Sequence: MPNKRKRITEKCSWSEESMKSALEAVENGAAQRETARRFNVPLNTLRDRIKKGHYYPARMGARTVFTEEQENEICQHLLHLSKMFFGLTPIQTRQAVFEYAARNAIPNKFNKDRKMAGKDWMSSFLKRHPNLSCRKPEATSINRITGFNKDEVDRFYENLISLMEKYKFGPTRIFNVDETGITTVHKPTKIIAGKGVKQIGIVTSWERGKNVTVCCCMSASGSFTPPLFIFPRLRMTPSLERNGPPGSIYKCTKNGWMTEEVFHMWLQHFVSTNKPTKEDPVLLVLDNHCSHISLRIYNFCRENGVVLLSLPPHSSNRMQPLDLTFFGPLKKAYDIECDLFMKSNAYEKITMYDIAQLFSKSYMRVANPSKAIKGFEVSGIYPINRNVFSEEDFYTSSNENASFSRSPPQRSISKDQPNSSSDQLGLSAPTETSFHDITPLPKKVSSMNGPKQNRKKQRSEILTSTPLKEQLEIAELKRRENERKKMEAACKKKKGKLVKDNVRVKTVKRRIVESSSNTDVSESEICNDDELDEAENIEGDEICIICREYGKDEEWYRCVSCGHWAHKLCTGYDSPKHYICDYCPGLQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00388066; iTF_00388098; iTF_00388099; iTF_00388100; iTF_00388101; iTF_00388102; iTF_00388103; iTF_00388104; iTF_00388105; iTF_00388106; iTF_00388107; iTF_00388108; iTF_00388109; iTF_00388110; iTF_00388111; iTF_00388112; iTF_00388114; iTF_00388091; iTF_00388095; iTF_00388096; iTF_00388085; iTF_00388086; iTF_00388087; iTF_00388088; iTF_00031830; iTF_00031851; iTF_00388092; iTF_00388093; iTF_00388089; iTF_00388090;
90% Identity: iTF_00388091;
80% Identity: -