Casp014545.1
Basic Information
- Insect
- Crioceris asparagi
- Gene Symbol
- GIP
- Assembly
- GCA_958507055.1
- Location
- OY293827.1:9075543-9091708[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 4.6e+04 -4.6 1.2 124 146 698 719 687 738 0.57 2 2 1.5e-44 2.7e-40 139.3 0.1 1 93 1211 1299 1211 1308 0.94
Sequence Information
- Coding Sequence
- ATGTCGAACGTGAGTCAATTCTCAGTGCCAATGTTGGAGGCcaataactacaataattgggAGTTTAGAATGAAACTCATACTCAAAAGAGAGAGCTGCGTTGATGCCTTGAATGAGCCGCCAGACCTCGATAATGCAACAGAAGAGGTGAAGAATAAGTTCATCAAAGTCGATACAAAGGCACAGTCAATAATAGTCCAGGGAGTAAGCGACAAACATTTAGACTTGATTAAAGATTGCAATACTGCAAAAGCACAACTAGAAAAGctaaaaagtatatttgtaaGAACAAGCTCTTTTACAAAACTGTCCCTGTGGAGAAAGTTAGTTAGTCTGAAGCATGGTGTGAACGAAAAAATGGAAGATCATTTTCTTAACTTCGAAACAATTATAAGGGAGTTAAAAGAACAAGGTTCAAGCATTGATGAGAGCGATCAAGTTTGTATTATGCTCTTATCACTACCATCAAAATATGATACGGTAGTAACAGCCATAGAAACGATAGCAGGTGTAAAAATGGACTTTGTTAAGTCGAGACTTTTAGATGAAGAGATAAAGCTAAGTACTAAGGTAGAAAACAGTGATAGTGAAATGATGTTTAAAGCAAGCACTTCAAAAGGATGTTTTACATGTGGTAGTATGTTACACATACAGATGTACTGCCCGAAAAGGATTAATAAGGGTCAACAAAGCTCAAGAGGATCTAACAGAGGTGGTTTTAGGTCAGGTTACAGAGGGCAAAGGAATAATAGTTCAAGAGGCAATCGTCATTATAAGCAGGAGacgaaacatgaaaaaaaacaagaagctCACACGGCAGAAGAAGAGGGAGTAGCCTTATATGCAGCAAATATATGCAATGAGGATATGAGCaagctattttttgttttagattcaGGAGCTAGCAACCATTTTGTCCAGGAACacttggaaaaatatatgtatgataTTAAGAAGCTCGAAACTTCTGTAGAGATACACATTGCTAACGgacaaattttgaaagcaaatAAAGTTGGAAAACTAAAAGCTAAATGTCAAAAACAGGTGATAACAATAGAAGCACTTATAGTGCCAAAGATTAAGCACAACCTATTGTCAGCCTCAAAAATAACGAACAATggccataaaattattttagaaaaggagAAGACTTCTATAGTTGGAAGAAATTTAGAATTAGTATGTTTGAGAAAGAATGGGTTGTATGTTATGATGTTAGATAATATCATAAATAAGGTTGAAAAATGCAATGTCACAACTACCGAGACGTGGCATAGACGATTGGGACATGCAAGCAAGGATGCTATGATGAAGCTGGGATTAAAACCGTTGGATAAAATATGCTCAACATGTGTCGAAGGAAAAGCCACTAGATCACCTTTtcctaaaaatgaaaacaaaacaaaaaccataGGAGAGCTAATCCATAGTGACATCTGTGGACCAATTACCCCAAACACACTTGAAGGTGAAAAATACTTTCAGGTAATATTAGATGATTTCTCTCACTTCCTGGTAGttagattattaaaattcaagaaCGAAGCTGAAGAAAACTTGAAGCAATATGTCACAGATTTAGAAAGGCAGCTAAATGTTAAAGTGAAAAGGTTCAGGCTTGATAATGGAGGGGAATTCTCTTCAAAAGGTTTCCGAGAGTATTGTAggcaaaatggaataaaattggaatatacAATGCCATATAGTCCACAagcaaatggaaaatctgaaagaATGAACCGAACACTCTTGAATATGATTAGAGCAAAGTTTATAGATTCCGGTATGAAAAAATTTTTATGGGGAGAAGCTATAAAATGTTCGGCATACGAACTTAACCGAACACCTACAACAACACTAGATAATGGAAATACTCCATCACAAATTTGGCATGGAAGAAATGACATTGATAAGCTTAGAATTTTTGGTGCTAGAACTTGGTACACTGTGATGCCTAAAGAAAATAAGTTGGAACCAAAAGCAAAGAAGGCAGTAATGGTTGGATACTGTGGAGGAGGATATAGACTGTGGTTACCAGATGAAAACAGAGTTATAAAATCAAGAGATGTACGTTTTGATGAGGATATTATGGAATACAAGACACAgacagaaaaagaagaaaaagtagtGGAAAATAAGATAAGTAGTTTAGATGAGacagaaaatgttataaatgagccagaaattgttgaagaagaaGAGAATCAAGAAAACCCAGAAAGCGAATATGAAGATATATCACCACTACCAGAAGTTACTAGATATGGAAGAACAATAACAAAGCCAAAGAATCTAAGTGATTATGAGATATATATAgcttattgtttattatctgCATCAGATGAAGAGCCCAAAACATGTAAAGAGGCTAGAAAGTCACAAGAATGGAAACAGGCAATGGATAGGGAATTAGAGTCCCACAAACAGTTACAAACATGGACCCCAGCTGAGCTACCAGAAGGTCAAAAGGCTATTGACACTCgttggatatttaaaattaaaaatgatggtCAGAAGAAAGCACGGTTAGTAGCTAAGGGATTTCAAGTTCCCAAAGAGGATGAAGAATTCAGCTATTCACCAGTATGTCGACTACCAAcaataagaattttgttgtcAGTCTCAGTGCAAAGAAATTGGAAATTGAGGCAAATAGACGTACCAACTGCTTTTTTAAATGGCATGCTAGATAATGAGgtgtatattaagaaaccagAAGGTCTTGAGAGCAGTTCacagtatttcaaattaaatcgaGCTTTGTACGGTCTACGTAATGCACCAAAATGCTGGAATGTGAAATTCACCGAAGTGATGTCAAAACTAAATTTCAGGAGATCAGAATATGATTATTGTCTTTATGTCAACAAAGATGTATACTTAGTCCTATTCGTGGATGACGCTTTAATTACCGGACCAGACATAAAAGTAGAAAGATTACTGCAAGAATTGTATCATGAATTTAAAGTCAAGAAAATGACTGAAGTTACGTCATTCTTAGGAATGGAAATTACAAAGATAGAAAATGGATTGAAAGTaagtcaatcaaaaatgattttgagattGTTACAAGAATTTAACATGACAGAATGTCGTTCCATATCAACACCAATGGAGcagaattttcaagtaaatgaaaatgaacCAATTATGGAAAACGTTTCATATAGAAGACTTATTTGTAGCCTAATGTATTTGTCTATTGTCAGCAGGCCAGACATTGCATTTAGTGTATCCTATTTAAGTCGTTTCCTGGATAAACCGACAATGCAACTCTGGAAAGCTGGAAAAAGGATATTAAGATATCTTAGTACTACAAGAGACTATGGAATGAAATTCTCGAAAGGAGACAGTGGTTTAGAGGGAATGTGTGATGCAGACTGGGGTGGAGACAAGCAGACAAGAAAGAGTATCAGTGGATTTGTTGCATTTCATGCTGGCAATGTAATCGCCTGGCACTCCAGAAAGCAGAACTGTGTAGCCCTATCGTCGATGGAGGCTGAGTATGTAGCAGCAGGGGTAGCAGCCCAAGAGCTTGTGAATTTGAAAGGTAGCGTGCTCTCCAGCATGATGCAACTTGATTCGTTCAGCATGTACGAGCAGCCAAAGCCGAGATTCATATTCAAGATGCCCAGAGTGGTGCCGGATCAAAAGTCCAAATTTGAATCGGATGAGCTGTTTCGACGATTGAGCAGGGAATGTGAGGTTCGATACACAGGCTACAGAGACCGACCGCAAGATGAGCGTATGGTTCGTTTTCAAAATGCCTGTCGCGAAGGTCACACCGAAATTGCCTTCACTGCCACAGGAACCAATCTTCAGCTGGTCTTTGCACCTCCATCATCCGGCTACTTGCCCGACAGAGAATGCGACTTCGATAAAGAACCTGGCAAGCGAAAAGGGAACATAAAACATCTGGAGTTGGAGTTGGATTGGGGCGAGATGTCATCACAACGGGTGGCATTTGACACCGttgcataa
- Protein Sequence
- MSNVSQFSVPMLEANNYNNWEFRMKLILKRESCVDALNEPPDLDNATEEVKNKFIKVDTKAQSIIVQGVSDKHLDLIKDCNTAKAQLEKLKSIFVRTSSFTKLSLWRKLVSLKHGVNEKMEDHFLNFETIIRELKEQGSSIDESDQVCIMLLSLPSKYDTVVTAIETIAGVKMDFVKSRLLDEEIKLSTKVENSDSEMMFKASTSKGCFTCGSMLHIQMYCPKRINKGQQSSRGSNRGGFRSGYRGQRNNSSRGNRHYKQETKHEKKQEAHTAEEEGVALYAANICNEDMSKLFFVLDSGASNHFVQEHLEKYMYDIKKLETSVEIHIANGQILKANKVGKLKAKCQKQVITIEALIVPKIKHNLLSASKITNNGHKIILEKEKTSIVGRNLELVCLRKNGLYVMMLDNIINKVEKCNVTTTETWHRRLGHASKDAMMKLGLKPLDKICSTCVEGKATRSPFPKNENKTKTIGELIHSDICGPITPNTLEGEKYFQVILDDFSHFLVVRLLKFKNEAEENLKQYVTDLERQLNVKVKRFRLDNGGEFSSKGFREYCRQNGIKLEYTMPYSPQANGKSERMNRTLLNMIRAKFIDSGMKKFLWGEAIKCSAYELNRTPTTTLDNGNTPSQIWHGRNDIDKLRIFGARTWYTVMPKENKLEPKAKKAVMVGYCGGGYRLWLPDENRVIKSRDVRFDEDIMEYKTQTEKEEKVVENKISSLDETENVINEPEIVEEEENQENPESEYEDISPLPEVTRYGRTITKPKNLSDYEIYIAYCLLSASDEEPKTCKEARKSQEWKQAMDRELESHKQLQTWTPAELPEGQKAIDTRWIFKIKNDGQKKARLVAKGFQVPKEDEEFSYSPVCRLPTIRILLSVSVQRNWKLRQIDVPTAFLNGMLDNEVYIKKPEGLESSSQYFKLNRALYGLRNAPKCWNVKFTEVMSKLNFRRSEYDYCLYVNKDVYLVLFVDDALITGPDIKVERLLQELYHEFKVKKMTEVTSFLGMEITKIENGLKVSQSKMILRLLQEFNMTECRSISTPMEQNFQVNENEPIMENVSYRRLICSLMYLSIVSRPDIAFSVSYLSRFLDKPTMQLWKAGKRILRYLSTTRDYGMKFSKGDSGLEGMCDADWGGDKQTRKSISGFVAFHAGNVIAWHSRKQNCVALSSMEAEYVAAGVAAQELVNLKGSVLSSMMQLDSFSMYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRECEVRYTGYRDRPQDERMVRFQNACREGHTEIAFTATGTNLQLVFAPPSSGYLPDRECDFDKEPGKRKGNIKHLELELDWGEMSSQRVAFDTVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -