Basic Information

Insect: Crepidodera aurea
Gene Symbol: stc
Assembly: GCA_949320105.2
Location: OX439472.1:35365969-35371075[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 4e+04 -5.1 3.0 15 19 338 342 337 345 0.68

2 15 0.47 9.5e+03 -2.1 0.4 4 10 371 377 371 377 0.93

3 15 0.00018 3.7 8.8 14.2 3 18 385 400 384 401 0.94

4 15 1.5e-08 0.0003 21.9 15.0 1 18 437 454 437 455 0.98

5 15 1.5e-10 3e-06 28.2 12.8 1 19 495 513 495 513 0.99

6 15 7e-08 0.0014 19.7 14.1 4 19 560 575 553 575 0.86

7 15 0.79 1.6e+04 -2.8 0.3 8 12 591 595 590 595 0.74

8 15 1.3 2.6e+04 -3.5 2.0 5 10 604 609 604 609 0.93

9 15 0.00034 6.7 8.0 7.6 1 11 615 625 615 627 0.96

10 15 1.1 2.1e+04 -3.2 1.0 4 10 630 636 629 637 0.68

11 15 3.5e-10 7e-06 27.1 12.3 1 18 642 659 642 660 0.99

12 15 1.2 2.4e+04 -3.4 0.8 6 10 689 693 688 693 0.85

13 15 0.0012 24 6.2 12.7 1 19 699 716 699 716 0.89

14 15 2.2e-07 0.0043 18.2 19.6 1 19 752 771 752 774 0.96

15 15 0.017 3.3e+02 2.5 17.2 1 18 781 799 781 800 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	4e+04	-5.1	3.0	15	19	338	342	337	345	0.68
2	15	0.47	9.5e+03	-2.1	0.4	4	10	371	377	371	377	0.93
3	15	0.00018	3.7	8.8	14.2	3	18	385	400	384	401	0.94
4	15	1.5e-08	0.0003	21.9	15.0	1	18	437	454	437	455	0.98
5	15	1.5e-10	3e-06	28.2	12.8	1	19	495	513	495	513	0.99
6	15	7e-08	0.0014	19.7	14.1	4	19	560	575	553	575	0.86
7	15	0.79	1.6e+04	-2.8	0.3	8	12	591	595	590	595	0.74
8	15	1.3	2.6e+04	-3.5	2.0	5	10	604	609	604	609	0.93
9	15	0.00034	6.7	8.0	7.6	1	11	615	625	615	627	0.96
10	15	1.1	2.1e+04	-3.2	1.0	4	10	630	636	629	637	0.68
11	15	3.5e-10	7e-06	27.1	12.3	1	18	642	659	642	660	0.99
12	15	1.2	2.4e+04	-3.4	0.8	6	10	689	693	688	693	0.85
13	15	0.0012	24	6.2	12.7	1	19	699	716	699	716	0.89
14	15	2.2e-07	0.0043	18.2	19.6	1	19	752	771	752	774	0.96
15	15	0.017	3.3e+02	2.5	17.2	1	18	781	799	781	800	0.92

Sequence Information

Coding Sequence: atgtCTTACGATAATCAGGCAACAAATCAGCCGGGTGGAAGGTTTCCATCTGCAGAAAATTACTATGATGGTTCAAACTACCAAAGTGAATCGTCTCAAAGAAACCATCCTCCTGTTGACATTTCAAATTCCACGTTAGAGCCTACAGCAAGAGAATTTTTTCCAACAAGTAACCAAAACGGTGCTGTTCGCAAAAAGAatcaatatcaaaataaattcaGAGAAAACAAAGAACAGAGTAACTGGAGAAATAGGTATGGAAGTGGCAGAACTTATAACAGTTCTAGGAGTAATTATAATAACAAATCTGGTAGGGAAAATTCATTTACTTCATCCAACTATCAAAGAGGTGATAATTATAATGTTACTGGTAATGAACAAAGGTCAAATTCAGAACATCTGAGAAATTCTTATCAAAAGCATTCGGAGGATAATCAAGAAGCAAATTCTGATTTAGAGGATTACCAAGATGAAAGAGATGAAAGTGAAAATATTTCCACAGCAAGTTCATCAAGAAATTACAGAAACTATAAAAGATTTGATAATAGTTATCAGGGAAAACCAAGAAATGAGAAATATGCAAAAAAATTTGAAGATAAAAGAAGCAATAATTACGTAAGACATAATACTAATTTTTCATTTCCTAACGAAGACTATGGTTCAAGAAGAAATAATCAGAATTACAAGAAAGGAGGatataaaagttattttgattctagAAATAGTCAGAAGTTTAAAGATACTACATCAAATAATTGGAGACGAGATGATTCATATTCAGAAAAAGATGCAGCAAGGAGTGTGAAAACTAGCAAAAAGAAATtggATGCAGCCTCACAAAGAGAAAGATTAGTTGAAATGCTCAATCGTCGCATATTAGAATGCCTCGTTTGttgtgataaaataaaaaataccgaTAAAGTCTGGTCTTGCCTGCTCTGTTACCATATTTTTCACTTAAATTGTGTAGTAGAGTGGGCAAAATCATCAAAAATAGAAAATGGTTGGAGATGTCCAGCCTGTCAAAATATGTGCAGTGAAGTTCCTAAAAAGTACCGGTGTTACTGTAGCAAAACTGTAGAGCCCAGGTACGAACCTGGCATAATTCCACATAGTTGTGGAGAGATGTGTCTCAGAAAAGGTCGTAACTGTGAGCATAAATGTACCATACAATGCCACCCAGGACCATGCCCGGACTGTATCATTATGATTTCAAAATCTTGTGGTTGCGGCTCTACTAAACAGATGGTAAAATGCAGTACTGATGTTGATATTGTTTGTAATTCCATTTGCAATAAAGTATTAGAATGTGGACTCCACCACTGCCAGCAGATATGTCACCCTGGTGATTGTCTACCTTGCGATAAAACTATCTTGCAGGAATGTTACTGTGCCAAAGAAGGCAGAAAAGTACCGTGTTGTGGAAAATACAAAGGGCAGACACAATATTGCTGTGGAGAAGTTTGTGGTAAACTGTTAGGTTGTGGGAACCACTATTGTGAACAGTTATGTCATGAAGGACCATGTGAAGTCTGCCCTACGGATGTTAGTGTTATAAAGAGTTGCGCTTGTGGGAAGAGCCCACTCTGCAAACCAAGATTATCCTGCTCAGATCCCATTCCATGTTGTGataagatttgtGGTAAAATATTGAAATGTGGTCAACCAAATGCCCCACACAGATGTGAAAAGACTTGTCATGAGGGTTCATGTCCCCCCTGCTCTAAAACTACCGTGGTTAGATGTAGATGTGGTCATATGGACAAGGAATTACCTTGTCATGAACTTACCACAAAAGCTGATGATGCAAGATGTGAGAAGAAATGTACAAAGAAACGTTTGTGTGGAAAACACAGATGCAATCAACTATGTTGCATTGAAGTAGAGCATGTATGTCCTCTTCCATGTAACCACCTTCTCACTTGTGGCCAACATAGATGCGAACGCACTTGTCATTCCGGTCGTTGCATGCCCTGCATAGAAACAAGTTTCGAGGAATTATACTGCGAATGCGGCGCCAGCGTTTTATACCCACCCATTCCCTGTGGCACGAGACCTCCGAGTTGCAACAAACCTTGTTCGAGGCCAAGACCTTGTGGGCACGATGCTAATCACAGCTGTCACACAGGGTCTTGTCCTCCTTGTACTGTTCTTTGTAAGAGATGGTGTTATGGGCATCACGAACAAAGATCGGCTATTCCATGTCATCAAGAGAACTTCAGCTGTGGTTTGCCTTGTGGAAAAGATATGCCATGTGGGAGACACAAGTGTGTTAAACCATGTCATGATGGCCCTTGTCCTACACCGTGTAAGCAGCCCTGTACTGTGCCTAGAGAATTGTGTGGGCATCCCTGCGGCAGACCTTGCCATGATCCACCATGCCCTGAAAGCAGCTGCAAGCAAAACGTCCCTGTTACGTGCCAATGTGGTTTACAAAAAAGTACCAGACCGTGCATAGAGGTTGCGGACGAATTCCTTAATATACAGATGACacatttgaaagaaaaaatggGAAGTTTGGCAACAAGTTCTACCATTGATTTAACCGATATATTAAATGGTACAAGAAAACCCACAATTCTTAAgatatTGGAATGCACAGAAGAATGCCGCGTTTTGGAAAGAAATAGAAGACTAGCCATCGGTCTACAAATCCGTAACCCTGATTTAAGTCAAAAATTAACTCCCAGATATTCGGATTTCCTAAGACAGTGGGGAAAGAAAGACGCTCACTTTTGCCAAAGAGTTCACGATAAACTCACTGAACTTGTTCAACTAGCCAAAAATAGCAAACAGAAAAGTAGATCATATTCTTTTGAGTCGATGAATCGAGAAAAACGCCATTTCATACACGAATATTGTGAACACTTTGGAGTGGATAGCGCGGCCTACGACATGGAGCCCAACAGGAATATTGTAGCGACGGCCACAAAGGATAAATCTTGGTTACCTAGTATGAGTTTATTGGAATTTTTGCAGAGGGAAAACGGTCAGAGGAAAGTACCTGGGCCGGTTTTGGGTCGAGGTGCTACTGGCAAAACTGAAACAGTATCTTTAAAGTTGCCTACTAGAGTACAAAGGCCAAATACACCTCCGATTGAAATTGTTGACAATTTCAGATCATAG
Protein Sequence: MSYDNQATNQPGGRFPSAENYYDGSNYQSESSQRNHPPVDISNSTLEPTAREFFPTSNQNGAVRKKNQYQNKFRENKEQSNWRNRYGSGRTYNSSRSNYNNKSGRENSFTSSNYQRGDNYNVTGNEQRSNSEHLRNSYQKHSEDNQEANSDLEDYQDERDESENISTASSSRNYRNYKRFDNSYQGKPRNEKYAKKFEDKRSNNYVRHNTNFSFPNEDYGSRRNNQNYKKGGYKSYFDSRNSQKFKDTTSNNWRRDDSYSEKDAARSVKTSKKKLDAASQRERLVEMLNRRILECLVCCDKIKNTDKVWSCLLCYHIFHLNCVVEWAKSSKIENGWRCPACQNMCSEVPKKYRCYCSKTVEPRYEPGIIPHSCGEMCLRKGRNCEHKCTIQCHPGPCPDCIIMISKSCGCGSTKQMVKCSTDVDIVCNSICNKVLECGLHHCQQICHPGDCLPCDKTILQECYCAKEGRKVPCCGKYKGQTQYCCGEVCGKLLGCGNHYCEQLCHEGPCEVCPTDVSVIKSCACGKSPLCKPRLSCSDPIPCCDKICGKILKCGQPNAPHRCEKTCHEGSCPPCSKTTVVRCRCGHMDKELPCHELTTKADDARCEKKCTKKRLCGKHRCNQLCCIEVEHVCPLPCNHLLTCGQHRCERTCHSGRCMPCIETSFEELYCECGASVLYPPIPCGTRPPSCNKPCSRPRPCGHDANHSCHTGSCPPCTVLCKRWCYGHHEQRSAIPCHQENFSCGLPCGKDMPCGRHKCVKPCHDGPCPTPCKQPCTVPRELCGHPCGRPCHDPPCPESSCKQNVPVTCQCGLQKSTRPCIEVADEFLNIQMTHLKEKMGSLATSSTIDLTDILNGTRKPTILKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFLRQWGKKDAHFCQRVHDKLTELVQLAKNSKQKSRSYSFESMNREKRHFIHEYCEHFGVDSAAYDMEPNRNIVATATKDKSWLPSMSLLEFLQRENGQRKVPGPVLGRGATGKTETVSLKLPTRVQRPNTPPIEIVDNFRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01047938;
90% Identity: -
80% Identity: -