Caur024179.1
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- Hr39
- Assembly
- GCA_949320105.2
- Location
- OX439475.1:44666849-44671708[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.05 1e+03 -0.0 4.9 46 111 97 166 5 217 0.60 2 4 1.3e-08 0.00026 21.7 0.0 1 27 284 310 284 325 0.84 3 4 0.029 5.9e+02 0.7 0.0 77 118 333 372 306 399 0.73 4 4 1.1e-73 2.2e-69 236.0 0.2 205 408 413 611 393 611 0.97
Sequence Information
- Coding Sequence
- ATGATGTCAGACTCATTGGTACCTGAGAATCTTTCGCTTTCTCAATCAAAATCTTCTTCTATTAGCGATTCAAAAGGAAGTCCTACACTTAGACTGAAGCAACCTCCTATGGGCAACTATTCTTTGCACAGTACCCCTAGTAATTCACCATTACTTAGTCAACGCCATCCTGTGACAGgaGTGCCAATTATAAGCCACAAAGATCTCATGATGCACAAAGGTCTGAACGTTCCCCCAACTCCCAGTCCCGATTCTGCCGTCCATTCCGCCTACAGTGTTTTTAGTTCCCCAAATCAATCTCCCCTTACACAACGGCATATTACGCTTACCCCTAATCTTAGTAGGAATAACAGTGATGCTTCGCACTCCAGCTGTTGTAGTTACAGTAGCGTTTCAGTATCAGTATCACCTACACAACAATTTTCGCCTACACATAGTCCTATACAGaGTCGTCACATGCCTAATATTCACAACAGCCCATTACATCAACAAAACCTACTTTACAGGAGCCTCCAAGACGAAAATCTCCAGTACGCTACTGAAGACAATTTAGATTTAGAGAGTGAAGACAAATCTGGAATCATACACGCATCTCTACCCGCACAACCGGGAATATCTAGACAACAgttgATCAACAGTCCGTGTCCAATTTGTGGGGATAAAATTTCTGGCTTCCATTATGGCATCTTCAGTTGCGAATCTTGTAAAGGTTTCTTCAAAAGGACAGTCCAAAATAGAAAAAACTACGTGTGTCTAAGAGGAGCCCAGTGTCCTGTAACAGTAGCTACAAGGAAAAAATGTCCAGCCTGTCGATTTGAAAAATGTCTTCAGTGTGGTATGAAACTGGAagCTATTCGAGAGGATAGAACCAGAGGAGGTAGGTCGACGTACCAATGCTCCTATTCGTTGCCTCCTTCCCTTACCAGTCATTCGGAACTAAGGGCGAGTACGACAGACTTAAGACAAATTGGTGAAGGTCATCATCCAGGCTTTACAGTCAAGTTGGAACCTCCAGATCTACCTCATCCGAGGAGAACTATGTTCCCTGGATCCAAAGGTGTCCCGCCGTTATTGCAGgAAATAATGGATGTGGAACACCTGTGGCACTACAACGAATCCGAACTGAATAAGTTAAGTACTGACGGCCATCTCGGTAAAGAAGGCTCAAGCGGCGCTGTACACAATTTGTCAACTCATCCACTTTTGGCTGGCACAGCTCTGGCAGGATCTGCAGACACGAACCCCGATTTCGTAGCAAATTTGTGCAATATTGCTGATCATAGGCTGTATAAGATAGTCAAGTGGTGCAAAAGTCTtcctttgtttaaaaatatatcgatcgaCGATCAAATATGTCTGCTCATTAACTCCTGGTGTGAGTTACTTCTGTTTTCCTGTTGTTTTCGATCAATGGCTACTCCAGGGGAAATAAGGATATCCCTAGGGAAGAGTATAACTCTGGCTCAAGCACGAGAGATGGGCATGCAAGCGTGTATAGAAAGAATGTTGAACTTTACCGAACAACTCAGAAGATTAAGGGTGGACCAATACGAATATATAGCTATGAAAGTTATTGTACTCTTAACTTCAGACACTTCAGAACTCAGAGAAGCTGAAAAAGTGAGACTATCTCAAGAAAAAGCTCTTAAAGCTCTACAAGACTACACGCTCACTCATTACCCAGAAAGTCCTGCTAAATTTGGAGAATTGCTTTTACGGATTCCGGAGTTACAACGAACTTgtcaaGTAGGGAAAGAGatgttgacaataaaatcaaaagACGGAGATGGACCGAGTTTCAACCTCCTAATGGAGCTCCTTCGGGGGGACCACTGA
- Protein Sequence
- MMSDSLVPENLSLSQSKSSSISDSKGSPTLRLKQPPMGNYSLHSTPSNSPLLSQRHPVTGVPIISHKDLMMHKGLNVPPTPSPDSAVHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQSRHMPNIHNSPLHQQNLLYRSLQDENLQYATEDNLDLESEDKSGIIHASLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTSHSELRASTTDLRQIGEGHHPGFTVKLEPPDLPHPRRTMFPGSKGVPPLLQEIMDVEHLWHYNESELNKLSTDGHLGKEGSSGAVHNLSTHPLLAGTALAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMATPGEIRISLGKSITLAQAREMGMQACIERMLNFTEQLRRLRVDQYEYIAMKVIVLLTSDTSELREAEKVRLSQEKALKALQDYTLTHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_00735601;
- 80% Identity
- iTF_00387279;