Cdil019776.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010003164.1:618270-636564[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00015 6.7 8.2 0.0 18 44 109 135 97 140 0.84 2 10 0.0005 23 6.5 0.0 21 44 140 163 137 167 0.90 3 10 0.0046 2.1e+02 3.4 0.0 21 52 168 199 164 199 0.87 4 10 0.0006 27 6.3 0.0 21 46 196 221 194 228 0.86 5 10 0.041 1.8e+03 0.4 0.1 21 44 224 247 220 255 0.75 6 10 0.033 1.5e+03 0.7 0.2 22 44 253 275 249 283 0.74 7 10 2.9e-05 1.3 10.5 0.1 17 44 344 370 339 373 0.86 8 10 0.00068 30 6.1 0.0 18 45 373 400 370 408 0.84 9 10 0.014 6.5e+02 1.8 0.2 21 46 518 543 511 551 0.83 10 10 0.24 1.1e+04 -2.1 0.1 27 46 581 600 577 602 0.79
Sequence Information
- Coding Sequence
- ATGGAGGATGACCCATTATcggtaaaccaaaatatgatgggCAATCCAATGGACGATGCTGGTCAACCTTCGACCTCCTTAATACCCCTTACCAATGAGATGGAAGTGGAAGCTAAAACTGATGTCTTTCGTGATGatAGTAGACGTAACGATAGTAATTACATTCAGCAAGACGACTCAACAGTCAAAGATGAAACCGAAGAGCCAATCATGCTGGCTCCAGAAGTTATCATCAGCTGCCCTCCGGACGACCAAGGCCCTGTGTATAGTGCAACTCCATCACATATTGGGAAACACTGGCTTACATCAAAGGAAGAACCCAAAAATCCCCAGGGTGAGAAAACCTTCAACTGCGACATCTGTGGCTATAAGGCTAGACAAATGGGTAATTTGAAGAAACACATCATGACTCACACAGGTGAGAAGCCTTTCACCTGTAAGATCTGCGACTACCGAGCTGGACAACTCAGTAATCTGAAAAATCATATGATGACCCATACAGgaGAGAAGCCGTTTGCTTGTGAATTCTGTGACTACAAAGCTGGTCAGCTTGTTCATTTAAAGCGGCACATGAGACTTCATACAGGTGAAAAACCCTTCAACTGTAAGATATGTGACTACAAAGCTACACAAGCCAGCAATCTAATGAAACATATGAGGACTCACACAGGTGAGAAGCCCTTCCCTTGTAATATATGCGGGTACGGAGCTGCAACGCTTGAGCGACTGAAAAGACACATGCTGCACCACACCGGTGAGAAGAGCTTTGCTTGTGACATTTGTGATTACACAGCTATCCGAAAAGTTCATCTCCAGCACCACATGAGGATTCATGCAGAAAACAAAACTACTACCAATGAATCAGCTAAGGTATCTGTAACCGAAGGTAAGGTCCAAAACAAGCTGATCACTGGTGATCAGCAGGCGACTGTAGATAGAACTCAGGTTGGCCAAACGAACGTCTCGTCAGCACAGCCCCTTCTAAAAACCGTCACTCGCTCATCAGCTGTTGAAGCTGTATCGAACTCAACACGAAGTCaGGAAAAGCCTCACACGTGCGACATTTGTAACTATAAAACTGGCCGAATCAGAAATCTGAAGATACATATGAAAGGTCATTCAGGAGgcGAGAAACCTCATGTTTGTGACATTTGTGGCTACAGAGCTGGACAAATCAGTAATCTGAAAAACCACATGGTGACCCACACTGGTATGAAGCCGTATGCATGTGAACAGTGTGATTTCAGAGCTAGTGAGCTTTCTCATTTGGAAAACCACATGAAGTTCCACACAGATTACATATCTACAGTTATAGGCTCTGCTGGAGATGCTGTAATAAAAGATGAACCGAGTGATCATAATCAGCTGGGGAATTCAAATCAAAGTCCAGGACATGATGGAACCAGTGCAGTGACACCTAGCTCTTATCCTCCGCCCGTGGACCCGAAACCAGACACTTATATTCATTTTGGAAAAATCATCGCTTGCGACTTCTGCGACTACAGAACGGATCGACTTAGAAATCTAAAGGTTCACAGGAAGATTCACACAGgCGAAAAACCATATGCGTGCACTTATTGCGACTACAAGGCTGCACAACACGCAACATTTAAGAGACATTTGATGTGCCACACTGGTGAGAAGCCCTTTGCGTGTGATCAGTGTGACTTCAGAGCCAACCAGCGCTCCCTTTTGGTATCTCACATGAAATGGCACACAGGTACGAACTCCGTCCATGCTTGCCAGTTTTGTGGTTATAAAGCTGGACAACACAGCGCATTGAGGAAACACATGAAAATTCATCTAGACGAGTTTTCTGCCCTTCTACTCGAAAAAGGTAACTATAGGCTATAG
- Protein Sequence
- MEDDPLSVNQNMMGNPMDDAGQPSTSLIPLTNEMEVEAKTDVFRDDSRRNDSNYIQQDDSTVKDETEEPIMLAPEVIISCPPDDQGPVYSATPSHIGKHWLTSKEEPKNPQGEKTFNCDICGYKARQMGNLKKHIMTHTGEKPFTCKICDYRAGQLSNLKNHMMTHTGEKPFACEFCDYKAGQLVHLKRHMRLHTGEKPFNCKICDYKATQASNLMKHMRTHTGEKPFPCNICGYGAATLERLKRHMLHHTGEKSFACDICDYTAIRKVHLQHHMRIHAENKTTTNESAKVSVTEGKVQNKLITGDQQATVDRTQVGQTNVSSAQPLLKTVTRSSAVEAVSNSTRSQEKPHTCDICNYKTGRIRNLKIHMKGHSGGEKPHVCDICGYRAGQISNLKNHMVTHTGMKPYACEQCDFRASELSHLENHMKFHTDYISTVIGSAGDAVIKDEPSDHNQLGNSNQSPGHDGTSAVTPSSYPPPVDPKPDTYIHFGKIIACDFCDYRTDRLRNLKVHRKIHTGEKPYACTYCDYKAAQHATFKRHLMCHTGEKPFACDQCDFRANQRSLLVSHMKWHTGTNSVHACQFCGYKAGQHSALRKHMKIHLDEFSALLLEKGNYRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386611;
- 90% Identity
- iTF_00386611;
- 80% Identity
- iTF_00386611;