Cdil010864.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010001326.1:1695471-1700521[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00011 0.018 16.8 0.1 1 23 169 192 169 192 0.95 2 16 0.0019 0.3 12.9 0.5 1 23 196 218 196 218 0.96 3 16 2.8 4.5e+02 2.9 0.4 3 20 586 603 584 608 0.90 4 16 1 1.7e+02 4.2 0.0 3 21 686 704 685 705 0.93 5 16 0.053 8.7 8.3 1.2 2 22 709 729 708 732 0.88 6 16 1.4e-05 0.0022 19.6 0.8 1 23 761 783 761 783 0.99 7 16 0.11 19 7.3 0.4 3 23 792 813 791 813 0.93 8 16 0.014 2.2 10.1 3.9 1 23 818 840 818 840 0.98 9 16 0.00022 0.035 15.8 0.7 1 23 843 866 843 866 0.96 10 16 0.00023 0.038 15.7 0.3 3 23 871 891 870 891 0.98 11 16 9.9e-06 0.0016 20.0 2.2 2 23 898 919 897 919 0.97 12 16 0.0004 0.064 15.0 0.2 1 23 925 947 925 947 0.97 13 16 0.0024 0.39 12.5 2.7 1 23 952 974 952 974 0.99 14 16 2e-06 0.00032 22.2 0.9 1 23 978 1000 978 1000 0.99 15 16 3.5e-06 0.00057 21.4 0.1 1 23 1006 1028 1006 1028 0.98 16 16 0.079 13 7.8 2.0 1 23 1034 1057 1034 1057 0.95
Sequence Information
- Coding Sequence
- ATGCTGAGTGGATTGAGGAAAACCTCCATCAAGGAGGACCTTAGTAACAAACCGGATAATGTCAAGAAGAAAGAGTATCCTTGCTTCCTCTGCAACGCCAAGAGTACTGAGAAAGGGATTCCACTTCTCGTCAGCCAAACCACATTCTCTAGGATATGTTTGGGCGAAAAGCTCCAGGAAATCCTTGGCGAAAAATTCATCGTCCTCATCACTTCAAAGGATGCAATTTGTTGGAAATGTGCCAAGTACATCAATTGGGTGGACAAGTGCGAGAGGAAACTAGATGTAGCCAGAGGCAATATCTTGAATATGGTGGTGACCAAGTATAAAAACGCGGAAATGGACATTCAGAGCATAGCTCCCAAAGAAATGTCTAATCATTACCAAAGCGGTTCGTCTATAGGTAACATGAGTAGGATTCAAGAAgtcaaaaacaacaaacctGGAAGTATAAGTGATTTTGTTGGTGGTTACGAGAAGTCTAGAGATGACAAGAAAAGATCGTACGAGTGTCATATCTGTCAGAAAGTGTTTGCCTCTCCTGCGGCCTTAGGCGTTCATAAAGCAAGACAACATCCAATCAACCATGTGTGCGACTACTGTGGCATGACTTTGTCCACTGAGGCCAAATATAAAGCTCACGTGGCTAAACATGCTCCTAAAACTACTCCGATCGCCAAAAAGATGCTTAATTGTGTTTTATGTGGTTTTCAAACGAGGAATATGGAGACTTATTGCAGACATGCATGTGATTCGAAAATTGTATCGTTGGTGTGTACATCATGTCGCAAAAGATACATTCACAATAAGACGACAAGTAGTGTTCCAGGGAAGAACTTATGTCCCGATTGTGTTGAAGGTAATCAATCCTTGGTTCAGCCAGCAAATCAGGCAAGTCAACAAGTATTAAGTTCGAACAATCAGTATACAGCGCAGCATCTTTATCAGCATTCAACTCAGCAGCTTCCTCAGCAAACATCACAGAATCTACCTCAGCAGTTGTCACCAAATGCTCACCTTTTGCCTCAGACATTACCACCCATAAGTCAAATGTCTATCAAAGAAGAAGTAGTGCTTGCACCAGAGGTTGATAGCATGCCTGACTCTTTGGCTATGGATGAAAACACTGAGGACCATGCAAACAATGCCATGACTGCTGAAGGAATGATGGCCTTGGCTGAAATCAATCCAGATGACATTGCTGCGGATTTGGTAGCAGTTGTGGGTTCTGACAACCTACATCACACTGATGATgattcaaatcattttgaaaacccGACCCATGCAGTCGAAGATGAAAATCAAGCAGAAACCATAATCTCTACAGATCTTCATAATGAAATGCCCGAATTTTTTAGGCCACCTCAGGAAAAACGCCTGTCCGATCAAAGTACAGGAGAGAACACTGAAGAAGTACCTGAAAATTCTGACCAGGTCGAGACTGAAGGGGAACTTATACTTCCTGTAGACAGCGGATCGCTGTTCAAATGCGCTAGTTGCAGCGAAGAATTCGACATTGATCAAGTGGCTACCCATCCTTGTTTTATTAACGCAGATACTGACTACGTGGAAGGTGATGCTGAATCAGATTACATACAAATACCTGTTTACGATGGTCAGCAGGAATCATTGTTATCCACTGACGGTGGTGAAATCATTCGTCGGGACAGACGAGTCAATAGAAGACGTATTCCTAAAATACCTGCTCAAGAAAATGCGCATTACACCCAAATAGAACCCGAGACCAAAATGCACTGTAAAACTTGTTACGCAGAATTCAGAACTATTGGTCTGATGAGACAACATTGGGATCTCACAGGACATTCCAGAGAAGTTTCGACCACTACGATTGAACTCAACAAGatcaaagacaaaaataataaaacggaaCAAACTTTTAAAGTGGTTAAACAGAATTTCAATATTAGGGCTAATGTGGTTGGTCAGAACGATGAAGACATCAGACGTACCGACGAACAGTTGAATAATTGTATTATCAAGGTGAAAGAAACACCAACTATTGAAGAGTTCATGTTGCGAAGGGAAGGAAAAATGTGTAATGCCTGTGGAGTTATATTTGGCGATGAAGAACTTCTTGCAGAGCATCAATGCAACAACTGTCTGACATGTGTGGCTTGTCACATAACTTTCATGGATAGtaagttgttgaaaaaacattACCAGTATACGGGGCATGCTTCTAAATTGTATAAGAAAGCGACTGGAGCTCCAAgttctccacaacaaactgcggTTGATGAACATCCAGTGGTGGACCCATACTACTGTCCCAAGTGTAACAAAACGTTCCCAGCTCGGCTGGCGTTGAGTAAACATCTCCGTACTCATTACAAAGGCACGAATGGTGGGGCTTGCCATTACTGTTTATTGGAATTCGAAGACAAGTCTCTAATTCAGCAACATGTTCTTGAAACTCACGGGGCGTACCTTTACAAATGCGATCATTGTGACAGAGCATTCCTCACTAAATCGGTTCGTAACAAGCACCAGTTGAAACACATCATTCACAGGTGTCAAGTTTGTAACGTTAAATTTGCCAATCAAAGGCTTTTGATTGTCCATATGGATAAAGTTCACCGGTCGAAAGCTTGTAGAATATGTGGCAAAATGATTACGGATCTGTACGCTTTGAGGCGGCACGAGAGACGTCATTTCTACGATACTGGACTCAAATGTGATTTCTGCGAAAAAACTTTCCGAAATAAGTCTTCGTTGAGAGATCACAACCGTATACACGATGAAGAAGCTCTATACCGCTGTAAAACCTGCGAAATGGGCTTCAAATCCCCCAGAAGCCTCGAGGACCACGAAATTGTGCACATAAAGAAGCAGTACACTTGCCCCAAATGCTCTACAGTTTGTCCATCTAAGAATTTCTATTGGATGCACATGAAGATGCACGATTTGGCCTACAAGTGCAGCGTCTGTGGGAGAATGTTCAGGGACACGTCTTTGCTGGCTATTCACAAGAGGAAACACTCTCGTGCACGTCCATATCAATGTCCTAGATGCCCCAGGGTGTTCTCAGTACCTGCAACTCTGCGGCGTCATCTCACTATTCACACCAGAACTTTCCCATTCAAgtgtgGTCTGTGTAAAAGAGGTTTCCTGACGAAGTACGCCTACCACAAACATTTGGACGTTGTCCACGCTGTTCGTAACGTGCAACCGCGCCGGGTCCTCAACCGGATTCCATCGCTGCCTCTCAACGCGACAGACGAAGATCTCCTCCACGCCGCGGACTCTTTCATCGCCGATGACGCCATCATGTTCAACGAGTATCAAAAGGACGTCACGATTGAGCAGGTACCTTCCAGTGACATGATAACGGAGGAAGTTATTGTCGAAACAACCGAACTGTTTGATGAAATACTTCATTAA
- Protein Sequence
- MLSGLRKTSIKEDLSNKPDNVKKKEYPCFLCNAKSTEKGIPLLVSQTTFSRICLGEKLQEILGEKFIVLITSKDAICWKCAKYINWVDKCERKLDVARGNILNMVVTKYKNAEMDIQSIAPKEMSNHYQSGSSIGNMSRIQEVKNNKPGSISDFVGGYEKSRDDKKRSYECHICQKVFASPAALGVHKARQHPINHVCDYCGMTLSTEAKYKAHVAKHAPKTTPIAKKMLNCVLCGFQTRNMETYCRHACDSKIVSLVCTSCRKRYIHNKTTSSVPGKNLCPDCVEGNQSLVQPANQASQQVLSSNNQYTAQHLYQHSTQQLPQQTSQNLPQQLSPNAHLLPQTLPPISQMSIKEEVVLAPEVDSMPDSLAMDENTEDHANNAMTAEGMMALAEINPDDIAADLVAVVGSDNLHHTDDDSNHFENPTHAVEDENQAETIISTDLHNEMPEFFRPPQEKRLSDQSTGENTEEVPENSDQVETEGELILPVDSGSLFKCASCSEEFDIDQVATHPCFINADTDYVEGDAESDYIQIPVYDGQQESLLSTDGGEIIRRDRRVNRRRIPKIPAQENAHYTQIEPETKMHCKTCYAEFRTIGLMRQHWDLTGHSREVSTTTIELNKIKDKNNKTEQTFKVVKQNFNIRANVVGQNDEDIRRTDEQLNNCIIKVKETPTIEEFMLRREGKMCNACGVIFGDEELLAEHQCNNCLTCVACHITFMDSKLLKKHYQYTGHASKLYKKATGAPSSPQQTAVDEHPVVDPYYCPKCNKTFPARLALSKHLRTHYKGTNGGACHYCLLEFEDKSLIQQHVLETHGAYLYKCDHCDRAFLTKSVRNKHQLKHIIHRCQVCNVKFANQRLLIVHMDKVHRSKACRICGKMITDLYALRRHERRHFYDTGLKCDFCEKTFRNKSSLRDHNRIHDEEALYRCKTCEMGFKSPRSLEDHEIVHIKKQYTCPKCSTVCPSKNFYWMHMKMHDLAYKCSVCGRMFRDTSLLAIHKRKHSRARPYQCPRCPRVFSVPATLRRHLTIHTRTFPFKCGLCKRGFLTKYAYHKHLDVVHAVRNVQPRRVLNRIPSLPLNATDEDLLHAADSFIADDAIMFNEYQKDVTIEQVPSSDMITEEVIVETTELFDEILH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01365794;
- 90% Identity
- -
- 80% Identity
- -