Cdil015633.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- -
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010002084.1:2983790-2991377[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0003 0.048 15.4 5.8 1 23 111 133 111 134 0.96 2 17 0.00073 0.12 14.2 0.9 2 23 151 172 150 172 0.97 3 17 3.8e-06 0.00062 21.3 0.7 1 23 178 200 178 200 0.97 4 17 3.4e-05 0.0055 18.4 0.8 1 23 206 228 206 228 0.98 5 17 0.0029 0.47 12.3 0.6 1 23 235 257 235 257 0.97 6 17 0.028 4.5 9.2 3.1 1 23 263 285 263 285 0.98 7 17 3e-06 0.00048 21.7 0.3 1 23 291 313 291 313 0.96 8 17 4.3e-07 6.9e-05 24.3 0.2 1 23 319 341 319 341 0.98 9 17 0.017 2.7 9.9 1.4 2 23 349 370 349 370 0.94 10 17 9.3e-06 0.0015 20.1 1.9 1 23 436 458 436 458 0.97 11 17 1.3e-05 0.0022 19.6 1.7 1 23 519 541 519 541 0.98 12 17 0.0059 0.96 11.3 0.7 1 23 547 569 547 569 0.98 13 17 3.4e-06 0.00056 21.5 0.3 1 23 575 597 575 597 0.99 14 17 0.0014 0.23 13.3 3.2 1 23 603 626 603 626 0.94 15 17 0.0082 1.3 10.9 0.0 2 23 630 652 629 652 0.95 16 17 0.56 91 5.1 0.5 2 23 659 681 658 681 0.92 17 17 0.077 12 7.8 0.2 1 20 782 801 782 804 0.94
Sequence Information
- Coding Sequence
- ATGGCGGAAGTCCAGAAAATGGACGAAGGCTTCAAAGAGGAATTTGTGTTCGTCGAGGAATATTTCCCTTTGGATCTCCACGAAGAGGAAGTCGTAGCGGAGACGGTGGACGGCCAGGAAATCGTCGTACAGCACTCCGAACATCAGGAAATCATTCATGACATCCAATTGGTCATTCCAGCAACCAACAGCATCCTCCCGGATACTTACGATCCTACAGACCCTTCGCAATGGGCTCAGGAAGAAGTCATCATCGAATCCTCGGAAAACCCGCCTATCGCTTCAGCTGTTATCAAGCTCGAAAACGACGACTCGTCGCAGTCCCACGTCTACGAGTGCTACAAGTGTGCGAAGCGGTTCAACTACAAAGATAAGCTGTTTAAGCACATGAAACTGCACCACGCTCGAGGTGATGACGCCATGATCGAGCGAGATGGTAAAAGGATATGGACTTGCACTCAATGTGACAAAACCTTCATATCCCGCAAAGGTTCCATCATTCATCAACGCACTCATACAGGAGAAAGACCGTACTCCTGCTCCGTTTGTCAAAAGAGGTTTATTGACTCCAGTACTCTCATGAAGCATCAGGTTATCCACCAAGCAGTTCGACCATTCAGCTGTCTCGTCTGCCGAAGAGGATTCAACCAAAAAGTCGCCCTTCAACGCCACGAAAGGACCCATGGTCAGATCCAGCCCAACTTCAAATGTAAATTCTGCCCCAAGACTTTCCTTGTCGGGAGTAGCTTGCAGGCTCATGAGAAGATCCACTCTGGGATCAAACCATACACATGCCAGTACTGCCCAAGCAGATTTCACACTTCCACTGCCCAGCGCCAGCATGAGAGAGTACATACCAACGAGAGACCTTACGCTTGTAGTTACTGCCCCAAAGCTTTTAAAGATTCAGGAACATTGTTCAAACACCAAGTGATTCATTCTGGAATTCGACCATTCGTCTGTCCGATTTGCTCCCAAGGGTTCACTCAGAAAGTAGCTTTGAGAAAACACATTAGATCTCACGTCTCAAGGAATCACGACAACACATGCGAAGTGTGTGAGACACAGTTTTTCTCTAAAGAGGATCTCTGTACTCATGTTGAAGACCACATTGAGCAACACCCTAGTATCACCCAGGTAAAAATCATTGCTACATCTTCGATGAGAAACAAACAGGAATTGTTGGTCGCGGAAAACATTGACAAGCCCCATTCTCCTGAGCCTGATAGGACAGAAAGCGATCTCAGTGACTTGGCAACGCTCTGCGACGTGGCAATATCTACAGCTGGCGACTTGGGCCAGAGCTTTCCCTGTCTCCACTGCGGCATGAGTTTCAGACGGAAGAGGTCTTTAGAATCCCATTTGACCATTCACAGGTCATCTACGTCAGTTGAAGCTAgagtttcaaatgaaattgaggttgagggTGGTACTGTAATCGCAACTGGTCCTTCGGAGGGAGTCATGGTATCAGGTGGAAGCAGCGAAAGAGGAAGTGGTAAAGACATGTCTCCCGCGGCAGCCAACAGTTCCTCCAAACATCCCAAGAGGTTCTTCTATTGTGAAAGATGTGACAAGACGTTTTCTTCGCGGAATGGCTACATTATACATCAGAGAAGTCATACTGGTGAACGGCCGTATCCTTGCAGGTGGTGTGAAAAAGCGTTTGGCGACTCGGCAACCCGCCACAAACATGAACGCATCCACACAGGCGAGCGACCTTTCAAGTGCTCCCGCTGCCCACGCGCCTTCAACCAACGTGCTGCCCTCCGCGCTCATCAAATCACGCACACCGTGGATAGGGCTTTCCTCTGCAAGTACTGTCCTTCGAGCTTTCCTTACTACGCCACGCTCAAGCGCCACCAACAGTCTTGCCATTCTAGCTTGCCCTGTCCTCTGTGTGCCGCTGCATTCCCAGACCCCAAAAAGCTCTATGCGCATATAAAGAATTCTCACACCGTGGAAACCAACCTTACTTGCTCCCTGTGTGACACAGTCATGTTTGCCGACTCCACCGAGTTCTGTGAACACATGGTTTGGCATGGAAAGCAACAACAAAACGATCCCAAGATGGTGGATGCTGAAGTAGAAAAGGAAACTGAAACTCAAATCGAAATCATCACTACCCAGGCAATCAAAGAAGAGATTGTGgaggaagaagaaataattacaGAGGAGGTGTACACGACAGAAGTAACCTTCGAAGACGTGGCAGACACCGAGACAGCGTCATTCGTGGAGGAAGGTTATTCGGAAGAGGTTTACACCCAAGATGACCCTGCTGTTGAGGAAATCATCGAGCAGACGATTGTGACTGAGGATTTCCCCATCGTGGATGGTGCATATAGCTGCGACGTTTGTGGCCTTCTGTTCCACGAGAAAGAAGCGCTTCAAGAGCACGTTCCTCTGCATTTTTAG
- Protein Sequence
- MAEVQKMDEGFKEEFVFVEEYFPLDLHEEEVVAETVDGQEIVVQHSEHQEIIHDIQLVIPATNSILPDTYDPTDPSQWAQEEVIIESSENPPIASAVIKLENDDSSQSHVYECYKCAKRFNYKDKLFKHMKLHHARGDDAMIERDGKRIWTCTQCDKTFISRKGSIIHQRTHTGERPYSCSVCQKRFIDSSTLMKHQVIHQAVRPFSCLVCRRGFNQKVALQRHERTHGQIQPNFKCKFCPKTFLVGSSLQAHEKIHSGIKPYTCQYCPSRFHTSTAQRQHERVHTNERPYACSYCPKAFKDSGTLFKHQVIHSGIRPFVCPICSQGFTQKVALRKHIRSHVSRNHDNTCEVCETQFFSKEDLCTHVEDHIEQHPSITQVKIIATSSMRNKQELLVAENIDKPHSPEPDRTESDLSDLATLCDVAISTAGDLGQSFPCLHCGMSFRRKRSLESHLTIHRSSTSVEARVSNEIEVEGGTVIATGPSEGVMVSGGSSERGSGKDMSPAAANSSSKHPKRFFYCERCDKTFSSRNGYIIHQRSHTGERPYPCRWCEKAFGDSATRHKHERIHTGERPFKCSRCPRAFNQRAALRAHQITHTVDRAFLCKYCPSSFPYYATLKRHQQSCHSSLPCPLCAAAFPDPKKLYAHIKNSHTVETNLTCSLCDTVMFADSTEFCEHMVWHGKQQQNDPKMVDAEVEKETETQIEIITTQAIKEEIVEEEEIITEEVYTTEVTFEDVADTETASFVEEGYSEEVYTQDDPAVEEIIEQTIVTEDFPIVDGAYSCDVCGLLFHEKEALQEHVPLHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145829;
- 90% Identity
- iTF_00145829;
- 80% Identity
- -