Cdil002712.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- bab2_1
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010000394.1:1561785-1577583[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.4e-13 2.9e-10 40.9 0.0 1 39 372 411 372 415 0.90 2 4 4.7e-11 3.2e-08 34.4 0.1 1 39 426 464 426 467 0.95 3 4 7e-17 4.7e-14 53.1 0.0 2 45 482 526 481 526 0.98 4 4 7.2e-19 4.9e-16 59.5 0.1 1 43 533 576 533 577 0.96
Sequence Information
- Coding Sequence
- ATGAGCTCGCAGCACTACTGCCTCAGGTGGAACAATTACCAGTCCAACATGACGTCAGTGTTCCACCATCTCCTGAGGACGCAGTCTTTTGTTGACGTCACTCTCGCCTGCAACGATCAGTCACTCAAAGCCCACAagGTCGTGCTCTCTGCTTGTTCGTCGTACTTCCAAAAACTACTTTTAGAGAATCCCTGCAAGCACCCCACCATCATCATGCCGCAAGACGTGTGCTTCACGGATCTAAAGTTCATAATAGAGTTCGTCTACAAAGGAGAGATCGACGTTTCCCAGGCCCAACTCCAGAGCCTCCTAAAAACAGCTGATCAGGTGCCTGAAGGTAAATCAGGTGCTGAGGTGACCCCATTGCCCTGCACGCCTCCCAGGAAGGGTTTGTCTGTAAGGAGGAGGAAAGTCGCATCAGCCAAGAGAAGATTGTTGTACAGAGAACGTCTGCTTTACCAATCTGCAGCCAACCGTGCCAACGACGCCAGTAGGCAGGCAGTAATGAAGAAGGAGGCGGAAACGAACTGTACGGATGTAGCGACTGGAACAGAAGAGGTTAAAGCTCTACCACTGGTAGTGGTCAACCAAAACAATGAGATTAACGACGCCATAATGCTCGCTAGTCCTCAAGCCCTCCAACCACTTCAACCGTCAATACCTGTACCTCAACCTCAGGTAACTGTACCAAACGAAATGAACCAGTCGACTCAGGTGGAGGTAGAAATGACGGGAACGCCAGCTGCCCCATCAGCCACCCTGGTCACCACCATGGACCTTCAGCAGTCTGACAACCCGACCACTCATCGGGACATTGCCATCGATTCAAGTGATTTGGACGTCGAGGAGAACGGAGTAAAAGTTAAATTCGAAACCCTAAGATCAATTGACCAGGTCGACCACATGGACATGGACGCTCATATGACCAACGGAGCTGTGCAGGCTAATGTGGAGGACGATCCATCTATGCACACTATGATGATCACACCTGAACTTCTTGGACTGATTCCATCATCGAATTCTGAGAGCAGTGATATGGACCACTCGAAATCCTCAATGAATGCGGTAAATACCATAAACTCCAACGCTATGTTGGCGGGAGGGAAAACGTGGACAAAGGAAGATATGGATGCAGCACTGGACGCATTACGAAAGCAGACGATGTCATTGAGCAAAGCATCTGCGCATTATGGCATCCCTTCAACCACGCTCTGGCAAAGAGCGCATCGGTTGGGAATAGATACACCCAAGAAAGACGGACCTGCAAAATCATGGACTGAGGACACTTTGAATACTGCACTTGGTGCTCTTCGTCAGGGATCCATATCAGCCAATAAGGCCAGCAAAGCTTTTGGCATCCCGAGCAGTACTCTGTACAAAATTGCGCGTAGAGAAGGAATTAGATTAGCTGCACCTTTCAACGCAGCCCCAACGTCCTGGGTCCCAGAGGATCTGGAGAGGGCGCTAGAGGCCATTCGGACAGGGCAATTCACCGTTCAAAGGGCTGCAACGGAGTACGGTATTCCCTCCGGAACATTGTACGGAAGGTGCAAAAGGGAAGGCATAGAGCTATCGAGAACCAACCCTACACCGTGGTCTGAAGACGCCATGATGGAAGCTTTAGAAGCCGTGAGAACTGGCCAAATGAGCATCAACCAAGCGGCCATCCATTACAACCTGCCTTACTCCTCTCTCTACGGCCGATTCAAACGTGTCAAATACGAAGCTGATGGGCTCTCTGGGAGCGAAACCGACAACTCGGAACAAACAACTGTCCTCCAACCGACCCAGCCGCCCGCGCATGCGCACACGCAACCTCAATTCATGCTGGTCCAGTATCAACAGCCTCTCCACATGTACCAGTCTGCTACATGA
- Protein Sequence
- MSSQHYCLRWNNYQSNMTSVFHHLLRTQSFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAQLQSLLKTADQVPEGKSGAEVTPLPCTPPRKGLSVRRRKVASAKRRLLYRERLLYQSAANRANDASRQAVMKKEAETNCTDVATGTEEVKALPLVVVNQNNEINDAIMLASPQALQPLQPSIPVPQPQVTVPNEMNQSTQVEVEMTGTPAAPSATLVTTMDLQQSDNPTTHRDIAIDSSDLDVEENGVKVKFETLRSIDQVDHMDMDAHMTNGAVQANVEDDPSMHTMMITPELLGLIPSSNSESSDMDHSKSSMNAVNTINSNAMLAGGKTWTKEDMDAALDALRKQTMSLSKASAHYGIPSTTLWQRAHRLGIDTPKKDGPAKSWTEDTLNTALGALRQGSISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTSWVPEDLERALEAIRTGQFTVQRAATEYGIPSGTLYGRCKREGIELSRTNPTPWSEDAMMEALEAVRTGQMSINQAAIHYNLPYSSLYGRFKRVKYEADGLSGSETDNSEQTTVLQPTQPPAHAHTQPQFMLVQYQQPLHMYQSAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00930489;
- 90% Identity
- iTF_01365317;
- 80% Identity
- iTF_00386526;