Basic Information

Gene Symbol
Bgb
Assembly
GCA_031894815.1
Location
JAVIWC010009404.1:2011775-2026452[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-47 1.8e-43 149.3 0.4 1 94 31 122 31 142 0.93

Sequence Information

Coding Sequence
ATGATTTCAATGAACGACCCGTCCGTGGGGATGATCCCATTCGACAGTATCGGCCTCTACGAGCAGCCGAAGCCgcggttcattttcaaaatgccGCGAGTCGTTCCGGATCAAAAGGCGAAATTTGAATCAGACGAACTGTTCCGGAGACTCAGTCGGGAATCTGAGGTGCGGTACACGGGTTATCGGGATCGACCTCAGGAAGAACGACAGATCCGATTTCAAAATGGATGTCGCGAAGGACACACAGAAGTGGCTTTCGTGGCTACCGGCACCAACATGCAACTAGTTTTCACACCAAGCACCAACGGTTACCACCTCTCCGGCAACAGAGATTGCGATTTCGACAAAGAACACGGAAAGCATGGAATGTGCATTCAAGGAACGAACCACGAAACCCTCTCATCAATTCAATACACGAACAACGTTAGGCCCAGACACATGAGGCGCCTGACAAGGATACACCACACGGATAGCGCTGATGGATTCAACTGA
Protein Sequence
MISMNDPSVGMIPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGYRDRPQEERQIRFQNGCREGHTEVAFVATGTNMQLVFTPSTNGYHLSGNRDCDFDKEHGKHGMCIQGTNHETLSSIQYTNNVRPRHMRRLTRIHHTDSADGFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00930076;
90% Identity
-
80% Identity
-