Basic Information

Gene Symbol
Zfhx4
Assembly
GCA_901521435.1
Location
CABEGB010000587.1:3900-91844[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.34 64 5.2 0.1 2 23 72 94 71 94 0.95
2 15 0.14 27 6.4 0.1 3 23 115 136 114 136 0.95
3 15 4.9 9.3e+02 1.5 3.6 2 22 201 221 201 224 0.89
4 15 0.0058 1.1 10.7 1.4 1 23 241 263 241 263 0.97
5 15 0.00017 0.033 15.5 0.2 2 23 270 292 269 292 0.95
6 15 0.0017 0.32 12.4 3.3 1 23 381 405 381 405 0.91
7 15 0.0047 0.89 11.0 0.6 1 22 425 446 425 449 0.89
8 15 0.00063 0.12 13.8 0.2 1 23 490 514 490 514 0.93
9 15 0.24 44 5.7 0.2 2 21 560 579 559 580 0.94
10 15 0.36 67 5.1 1.8 2 19 726 743 725 748 0.91
11 15 0.0001 0.019 16.3 2.5 1 23 1343 1365 1343 1365 0.99
12 15 0.0034 0.65 11.5 0.5 1 23 1471 1493 1471 1493 0.98
13 15 0.0091 1.7 10.1 0.3 2 23 1635 1657 1634 1657 0.95
14 15 0.0018 0.34 12.3 0.0 2 22 2134 2154 2133 2154 0.94
15 15 5.1 9.6e+02 1.5 0.0 1 22 2173 2199 2173 2202 0.84

Sequence Information

Coding Sequence
atgagATTCTACTACGTGGACTTTCATTCTTTACCTATATGCGCGACCACGTATTGGAATCTGATTTTACGCGAGACTGTAATTTTAAGTGCGGAACACGATTCCTTCGGCGAACGACGAGAGGAAGGTAGTGATTGCGGTAGTGAAGTAAAACAAGAACCAGACAATGATCCAGAACCGGAAGCCGAGACCGAGAATGACCAAGAAGAAATTACGTGCGCATACTGTACGTATCAGCCGACGTCGCGGGAAGAATTACGCCAGCATTTGCAAGTAGCTCACGTTCAAGATTCGGAGGAGAAAACTGAAACGGTGAAGGAAGAGCCGACGACGGAATTGTTGTGCCCGTTGTGCCAAGATAGTTTCAAGGAACGCCCCGCCCTGGAAAAGCATGTGATGCAAATTCACTCCGTTAATACCGATGGTCTGCAGAGGTTGCTATTACTAGTGGATCAAAGCCATTGGCTAAACAACAATCGGAATACCTCGACGCCGGCTGTGACGACCGCAACGATGCCGACATCGCCCACGACAACGACGAAGACCCATCAGGAGGAAGAAATGAGTGAACGGGGTGATAATGACGAAATCGAGTTAGCCAGGTGTAACAAGTGCGACCGAGTTTGGCGTTCTATCGAAGAATTTCGGCAACATCATTGTCGGGATGCTCATCCGACCACAACGCCTACCTTGGCGGTTAGCGAGAAACATGTTTATAAGTATCGGTGCGTACAGTGCAGCCTCGCGTTCAAAACCTTGGAGAAACTTCAGCAACACTCCCAGTATCATGCTATCAGAGATGCGACTAAATGCGCCCTGTGCGGACGATCTTTTCGCTCGGTCCAAGCGCTTCAAAGACATTTGGATTCTGCCCATGATCTCCACGAAGAAGAGATGGCTCAGTATAAGCAGAGCTTGATCCACTCGCATTCCCTTCTTCAGACAATAACGGAAGAAACATTGAAGAGACATGTCGGCCTGACTGGCGAGCTGCATGTGGAAGATGACGCTGGTAGGGGTGACGAGGAGGAAAGTGATGCCAGTGATTCGTCTCCGTTGCAGAAGGAACAACGACTATTAGAGGATTACCTAAACAGCCAAACGATCGCTGAGGACTCATACCAAGATCCAAGTAGAAAATTCAAGTGTCACCGATGCAAAGTAGCTTTCACCCGTCAGAGCTATCTGACTGGCCACAATAAGACCTTGCTGCATCGCAAAGGTGAAAAAATGTCTTATCCCatggaaaaatatttggatCCTAACAGACCATATAAATGCGACGTTTGTAAAGAAAGCTTCACGCAGAAGAACATCCTTCTGGTGCACTATAACAGCGTAAGCCATTTGCATAAGTTGAAGCGAGCAATGCAAGAGCAAGGTAATAACAACACACTGATCTCGGTAGCACCTCCCGCTAGCCCGACTGAATCGCCCGATTCCCAACAAGATCAAGACAAGAAACCGTACAAATGCAATATTTGCAAGGTTGCTTACAGCCAGGGCAGCACTTTGGACATTCATATGAGAAGTGTTCTTCATCAAACGCGTGCCAGTAAACTGCAGGATCTTGCAGCCAGTGGCCAGTTAGATCTCGCTCGACCATTGATTGAGCAACCACCATTGAGTCCAAATAGCCCGCCTATCAACACAGGCAACACAGGAGGAGGGCTGCTCACCTGTTCGCGCTGCAATAGTCTGTTCATCTCACAGGAACAGCTCGTGCAGCATCAGCAGCTATGCAACCTTTTGACGAGTCCGGCATTGTCCGCCAATCTGGCGTTGTTTCAACAATTTGCGTCGCAGCAATTAGCTTCGTCCGCGCCGGCTAAATCGCCACCTCCTACATCAACGACACCAGGGCCGCAACAACACATGCAATCAGCTACGCAACACTCGCAGACGACGCAGGATATTCTCTCCCAGCCACGACATAAAACCTCGCAGATGTACAAGCACTTATTGGAGAGTTTCGGCTTCGATCTTGTTATGCAGTTCAATGAGAATCATCAAAGACGACAGCGCAAGGAAGAGGAAGCCGCCGCCCTTCAAGTGCAGCAAGAGCAGCAGAAGCAGGAACAACAGAAGCAAGCTCTCGCTGTGatacaagaaaaagaagaagaaaccgAAGAAGCTCATATCGATGATGATGTGATACCAGAACTTACGCGCAGCACTTGTCTGCACTGCAATAAAGAATTCAGCAGCGTTTGGGTTTTGAAGGCTCATTGTGAGGAAGTTCATCGCGATCTCGTACCGCGCGAATTTCTCGAGAAGTACGCGCAACAGATCAAGTGGGAGTACGAAAAGAAAAGTGTCGTAGTGACCGTTGCGACGTCCTCGTCAACCACCACGGCGCCAAGAAGTTCTACGCCCGCTGCCGCACAACCTCAAGATCTCAGCTCGGACAAAGAATCTCGCGAAAAGGAGAAGGAGGATAATATCGAGAGCAAAGAATGTATTAGCCGAACACCAGAAGCTACGTCTACTACTCCAGCGACTACTCCGGCATTGAGCAACACACCTGTTTCAAGTACAGATTCCACCACGACTGTGCTACCTACTACTAATCCGCAGCATCATATTTCACAACAGTcacaacaacagcagcagcaacaacaacagcagcagcagcagcaacaattacagcaacaacaacaacagcaaGCCCAACTTTCATTTGCACAACAAATGACTGAAATGCAGGCTGCTCTAAATGCAATGGCTGCATCGCAACTGCAACAACAGTTACAACAGTATCCTGGATTGATGATGGGAATGATGGGATTACCATTGGGATTAAACGTACCCGCTTTAGCTGCTATGAACCTACAGCCACCTCTAGTGCCAATGATGCTACCGCCACCACCATATGACGGTGCCACTACGGCATATCCACCGATTAATCAAGCAGATCTTCTTGCCAAGCAGCATCTTGCCCTTCAACAGCAGcaagcagcagcagcagcgGCGAATGCAGCTGCGTCACAGAAACGAGCGCGTACGCGTATCACTGATGAGCAACTAAAAATACTACGAGCACATTTCGACATCAATAATTCTCCTGGGGAAGAACAAATCCTAGATATGGCCAGTCAGAGCGGTCTGCCACCTAAAGTCATAAAACATTGGTTCCGAAACACGTTATTCAAGGAACGGCAGCGTAACAAAGATAGTCCTTACAATTTCAATAATCCGCCAAGTACCACTCTAAATCTCGAGGAATATGAGAAAACCGGTGAGGCGAAGGTAACACCGTTAAATTCAAGCGTATCTGGTAGCAGTTCCTCTGACGATAAAAGCCCGAATAAGCAAGCCACACCTCCGCCGCAAAACACTAGCGCGTCTCAACCTGCCGAGATTAAGCAGGAGGCACTCGAACAATCACAGTgtcaacagcagcagcaaacTGCGCAACATCAAGAAGAGCAGCATCACTCGCCCGGCAGTTCAGGTGGACAGCAATCGCGACCGCATTCACCTGCGCTTAGTATGAGTTCCGTATTCTCGGCCATTCATCACGACCTTTCGTCCCACCCTCCATCGACTACGAACGCACCGAGCACTCCAATGTTACCACCGAAATTAGCTTCCCAGAATTTTGCCAATCCTACTCCGGGAGCCGGTGGTGTAGTGCAGAGCGCGATTGCCGCAATGGCGCTCACACCACAGAGATCTCTGAGCCCAGGTCGCGGACCGGCTGACTATTTCGGTGGTAACAGTAACGGCAGCAACGCTTCCGGAGGTAGCTCCGGTAAACGTGCCAATCGCACGAGATTCACGGATTACCAAATAAAAGTTCTGCAGGAGTTCTTCGAGAACAACGCATATCCGAAGGATGACGACTTGGAATATCTTAGCAAACTCCTCGGTTTGAGTCCACGCGTGATCGTAGTGTGGTTTCAGAATGCTAGACAGAAAGCACGTAAGGTTTATGAAAATCAACCCGCCGCTGAACCCGTGACAACGGGTGGACGCGAAAACGACGACGGATCCGGTAGATTTCAAAGAACCCCAGGCTTGAATTATCAATGTAAAAAGTGCCTGTTAGTATTTCAAAGATATTACGAGCTTATACGTCATCAAAAGACCCATTGTTTCAAAGAGGAAGATGCCAAGAGGAGCGCGCAAGCGCAAGCTGCGGCGGCTCAGGTTGCCGCGGTTCTGAGCTCCGAAGACAGTAACAGCAGCTCTACAACGACTACAAACAATACGGTAGCTAACAATATGTCAACTGCTCCCGCGCTTACTGAACAGTTGCAGCAACCATTGAGCACCGCCACGTCACCTCATCAGCATCAGCAGCAAACCCTGTCTCAAACACACCAACAGTCacaacagcaacaacagcaacaacaacaacagtCACAGTCAACACAACCAAGTCAATCAGAGTCAAAGGAAGGCAATTTTCAGTGCGATAAATGCAATCTGATGTTCGGTCGATTTGAACTTTGGCGCGAACATCAGCTAATACATATCATGAACCCAACTTTGTTCCCTTCTGCGTACCCCCCTGATTCACCCTTTGGAATCTTACAACAACAAGCACTTAATGCTAATCAAGGCTCTGGAGTTGCAACAGACAATCCGCATTCGCTCATCAGCATGATACAGAAGAGGAAGTTCGATGATCCCGAGGAAGGAAACAGTGACAATCGCTCGAATTCGGAACACAACGAGCAACCCAAGGATAAGCGTTTACGAACCACCATACTTCCGGAACAGTTAGACTATCTTTATCAGAAATATCAGATCGAGTCTAATCCATCGAGAAAGATGTTGGAGACGATCGCCCGTGAGGTCGGTTTGAAGAAGCGTGTGGTGCAGGTTTGGTTCCAAAATACTCGCGCCCGCGAGCGTAAGGGCCAATTTCGCGCCCACAGCCAAGTTATCAATAAACGCTGTCCATTCTGCCCGGCACTATTCAAAGTCAAATCTGCTTTAGAGTCTCATCTCAGTAGCAAACACGCTGATCAGGTGGCTCGGGGCGAAGTGAACATCGACAACATCCCAGACGAGGAGCTCTCGATGGAGTCCGTTCCTTCCAATTCTAGTACACCTCACATGATGCCACCGTTGTTTCCGCCAATTAACAACAGCGACATGGAGGCATCTTTAAAATCCTTGAAATACTATGAGGATATGAAGCGATACTTCAGCGAATTACAGGCGCACGCCAGTAACGGAAAGCAAGAAACAGCAAATCATCAGGCTGGCGGAAACAGCGGTGAGTCACCGTTGGATCTAAGCAAACCAGTCGATCTCAGCCGGCCAATGAAATTGTGTTTGAGCAACTTCAGCAGCCTTCTCGAGGAGCAACACGGCGCTCACTTTCGTGGCGGTAGTGATTGCGGACCTCTGACTGACTTATCCGAACGCAGCGTTTGCGATGACGACAGCATGAGCGAGACCACAGAGTTTTTGGATGATGAAAGCGGGCCAGCAAGTCCGGCCTCGAGCACACAGAGCTCAAGACAAGGACCCGCCAGCGGAAATGCCGGGAATACATCCGGACCGCCAGTAACCGGTGGACAATCCGGCGGTAATACCGGCCAATCAGGTGGCAAGCGATATCGCACGCAGATGTCGGCTACTCAGGTGAAGGTGATGAAGTCGCTCTTCTCGGACTACAAAACACCGACGATGGCCGAATGCGAGATGCTTGGCCGTGAGATCGGCCTTCCGAAACGGGTGGTGCAGGTGTGGTTCCAGAACGCCCGCGCAAAGGAGAAGAAGGCTAGGTTAGCGGCTGGTTTGCCGGCCGAAGGCTCGGCCGTTCAACCACATCGCGGCCCGACCGGACCAGACGAGTGCAGACTGTGCTCTGTACGCTACTCGGCCAAGACGCCGCTGCAGGAGCATGTCTTCTCGCGGCGGCACATCGAGTCTGTGCGCGTCGCCGTCGAGGAGGGCAGTCTGGTGCCGCCGACTCCCGGGGCACCGATTGTGCCGGGCGGCAACAGTTCCGCCGGCGTGTCCAGTATCAGCAATTCGCCGGTGATCACCACGGCCAGTCAACAAGTCAGccagcagcaacaacagcagTCAGATGAAAACATGATGTACGGATCCGTTTTCCTTCATCCCACGGCAATGTTCCAGTcgcagcaacagcaacagcagcagcattCCGCCGCCGCTGCGGCCAGTGCAGCTAGTACTACGGCCGTAGCGGCTGCGGGCTTGAGCGGCGGTCTACTCGGGACAGCTATGATGCCGCTGCACGTGGAGGGTGCTGCACAGGTACAGGTGCCGCGAGCCCTAATGCAAGCGTTCCTGCAGCAGGATCCGAATCATCCGGGTCTGGAGACGGTCCGTTTGCCAGCTCCGCCGTGCGGTGCCGACGAGAACGGGCCGCCCCAGCACTGTCGCGAGGTGGAGACCGAGCTGTGCCTCGTCTGTCGCCGTTGTGGTCGCGCGTATCCGCAGGAGTCGTCGCTGTTGGCACACCAACGATCCTGCTACCTGGGCAATCAGCAACGTCGCGGCGCCCTGCGTCTCGTGCAGGCGCGTTACGCCTGCTCGTTGTGCGAGCCCGGCGTACCAACGCGCACCTACAGCACCGTAAGCGAGTGGCGTCGTCATGCCGAAACGCTGCAGCATCGGGCGCGTCTTGAGGCTGCCCAACAACAACACCaccagcaacagcagcagcagcaataTGATGGCGGCGCGCAGTCCGGCGAGGAAACGAATCCGCTTACGGACGAGATGGAGGATGTCGTGAACCAGATCACCTTATTGGCGGCTCGCGCGGCCGCTGAGAGCACGACCGGTCAGCCACAGGCCAGTGATAGGGCTGGTAGTCAGGACAACAACAATGGACCCGATGCCAAACGACAGAAGTTGGTGCAGGAGGTCACCGCCCTCGCAGGTGCACGTTAA
Protein Sequence
MRFYYVDFHSLPICATTYWNLILRETVILSAEHDSFGERREEGSDCGSEVKQEPDNDPEPEAETENDQEEITCAYCTYQPTSREELRQHLQVAHVQDSEEKTETVKEEPTTELLCPLCQDSFKERPALEKHVMQIHSVNTDGLQRLLLLVDQSHWLNNNRNTSTPAVTTATMPTSPTTTTKTHQEEEMSERGDNDEIELARCNKCDRVWRSIEEFRQHHCRDAHPTTTPTLAVSEKHVYKYRCVQCSLAFKTLEKLQQHSQYHAIRDATKCALCGRSFRSVQALQRHLDSAHDLHEEEMAQYKQSLIHSHSLLQTITEETLKRHVGLTGELHVEDDAGRGDEEESDASDSSPLQKEQRLLEDYLNSQTIAEDSYQDPSRKFKCHRCKVAFTRQSYLTGHNKTLLHRKGEKMSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQGNNNTLISVAPPASPTESPDSQQDQDKKPYKCNICKVAYSQGSTLDIHMRSVLHQTRASKLQDLAASGQLDLARPLIEQPPLSPNSPPINTGNTGGGLLTCSRCNSLFISQEQLVQHQQLCNLLTSPALSANLALFQQFASQQLASSAPAKSPPPTSTTPGPQQHMQSATQHSQTTQDILSQPRHKTSQMYKHLLESFGFDLVMQFNENHQRRQRKEEEAAALQVQQEQQKQEQQKQALAVIQEKEEETEEAHIDDDVIPELTRSTCLHCNKEFSSVWVLKAHCEEVHRDLVPREFLEKYAQQIKWEYEKKSVVVTVATSSSTTTAPRSSTPAAAQPQDLSSDKESREKEKEDNIESKECISRTPEATSTTPATTPALSNTPVSSTDSTTTVLPTTNPQHHISQQSQQQQQQQQQQQQQQQLQQQQQQQAQLSFAQQMTEMQAALNAMAASQLQQQLQQYPGLMMGMMGLPLGLNVPALAAMNLQPPLVPMMLPPPPYDGATTAYPPINQADLLAKQHLALQQQQAAAAAANAAASQKRARTRITDEQLKILRAHFDINNSPGEEQILDMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVTPLNSSVSGSSSSDDKSPNKQATPPPQNTSASQPAEIKQEALEQSQCQQQQQTAQHQEEQHHSPGSSGGQQSRPHSPALSMSSVFSAIHHDLSSHPPSTTNAPSTPMLPPKLASQNFANPTPGAGGVVQSAIAAMALTPQRSLSPGRGPADYFGGNSNGSNASGGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPAAEPVTTGGRENDDGSGRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAAVLSSEDSNSSSTTTTNNTVANNMSTAPALTEQLQQPLSTATSPHQHQQQTLSQTHQQSQQQQQQQQQQSQSTQPSQSESKEGNFQCDKCNLMFGRFELWREHQLIHIMNPTLFPSAYPPDSPFGILQQQALNANQGSGVATDNPHSLISMIQKRKFDDPEEGNSDNRSNSEHNEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVGLKKRVVQVWFQNTRARERKGQFRAHSQVINKRCPFCPALFKVKSALESHLSSKHADQVARGEVNIDNIPDEELSMESVPSNSSTPHMMPPLFPPINNSDMEASLKSLKYYEDMKRYFSELQAHASNGKQETANHQAGGNSGESPLDLSKPVDLSRPMKLCLSNFSSLLEEQHGAHFRGGSDCGPLTDLSERSVCDDDSMSETTEFLDDESGPASPASSTQSSRQGPASGNAGNTSGPPVTGGQSGGNTGQSGGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKKARLAAGLPAEGSAVQPHRGPTGPDECRLCSVRYSAKTPLQEHVFSRRHIESVRVAVEEGSLVPPTPGAPIVPGGNSSAGVSSISNSPVITTASQQVSQQQQQQSDENMMYGSVFLHPTAMFQSQQQQQQQHSAAAAASAASTTAVAAAGLSGGLLGTAMMPLHVEGAAQVQVPRALMQAFLQQDPNHPGLETVRLPAPPCGADENGPPQHCREVETELCLVCRRCGRAYPQESSLLAHQRSCYLGNQQRRGALRLVQARYACSLCEPGVPTRTYSTVSEWRRHAETLQHRARLEAAQQQHHQQQQQQQYDGGAQSGEETNPLTDEMEDVVNQITLLAARAAAESTTGQPQASDRAGSQDNNNGPDAKRQKLVQEVTALAGAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00142019;
90% Identity
iTF_00385098;
80% Identity
iTF_00385098;