Clev026815.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- clz9
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000905.1:123016-125236[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 7.9e-08 32.8 0.0 4 36 23 55 20 62 0.87
Sequence Information
- Coding Sequence
- ATGGAGGAACGGAAGAAGtcccaaataaaaaaaaaatctaaacaaaatatgAATTACAACGAGCAAAACATAAAACTAGCTTTACAGCAAATTAGTGAAGGGATGTCCGTACGTAGCGCTTCGAAAGCATTTGGCATTCCCAGAACTACGcttcaagataaaaaatttggaCGACATCAACGATCAGTCGGAGCTCCTACTATATTGACACAAGATGAGGAAAAAGTTTTTACTAATTGGATAATCGAACTGGGAAAGCAAGGATTTCCAGTAACAAAAGATCAACTCTTATACAGTGTTTCCAAATACATAGCAGAGAATGGACGAAGCAATTGTTTCAAGGATGGAATTCCAGGGCGCAGATGGTatgaaagttttttaaatcgtCACAAAGAAATATCCAAAAGAGTATCTCAAAATTTGTCGACGGCTAGAGCAAACATAAATGAAGAAGGAGTTCGAAATTGGCATGCAAAAATCAAGAACTTTTTTGAAGAATATTATCTCAACCAAGTTTTAACTGACCCCAGTCGTATTTTTAATTGCGATGAAACAGCTTTTTACCTTTgtccaaaaaataaatttattcttgctAAAAAAGGATCTAAGCAGATTTATAATAGAACAACTAATGATGAAAAGGAATGCCTGACAGTTCTTATTGGAGCATCAGCTACTGGATGTTTAATACCACCATTAACTCTGTTCCCATACAAACGCATGCCACAGAATATTGTTGCAAAAATGCCTAAAAATTGGGGAATAGGGAGAACCGACTCAGGTTGGATGACATGCGAggcattttatgaatatataacaaatattttttatccataTTTGCAACAAAATAACGTTGAATTTCCTGTTGTCATGTTCCTTGATGGGCACTCATCCCATTTTTCTTTGCATCTAAGTACATTTTGCAGAGAAAAGGGCATTATTTTAATCGGCTTGATACCAAATGCAACGCATCTTCTGCAGCCTATGGATGTATCTCTGTTTCACCCCCTTAAGAACGAGtggacaaaaataatttataaatggcGAATCAATAATAACGGTGAACGCCTGAAAAGAGAGGATTTTTCAGGTTTAGTTAACGAATGTTTGCAAAGAGCAGCTAAACCAGAAACAATACGCAATGGCTTTAAGATCTGTGGATTATATCCATTCGATGTAAATGCAGTGCCTTttgaaaaactattaaaaactaCAGCCGATGATTCAGAAAAAACAGAAAGTGAAGAATTAGAgccaagagaaaaaaatgaagatattCGCTCAAATCTGTCATTCATTGAAAGTATGATAGGAGTCGAAAGATTACAAGAGTTCAAGAGATGTGAAAAGACTCAATGGAATGGCCAACCGAAAGATGAGgATCATAATATAACACTTGaggcaaatataaatttttccgCCCTTGAACTTGATAAGAATTTCACTGCAAACGATGTAATCGACTTGGACGTAAATGCAGATGGTTCAGTTATGATTTCGACACCAAAATCAAGCTGTGCAGATAATGTACAGATTTTCGGACAATTGGATGATTCACCGATCTCCAACCTAAGAGAGCAACGAGATGAAAATGACAACCtcgaaaattttgataaacaaACACTGATtactcaaaaaaaaatatttccatctcCGTTCAAAAATGCGCTTTTTTGGCCAGGCACCCCAGTTTCAACAACTAAATCTGGAAAAGTTAAACGTAAAATAACTCCATCAGTAGCTGTTGCTGATGAGTTTATGGCATATCAAATagaactaaaaaataaaaaggatgAAAAACTATCGAAATCGAAAGCTAAGGGtaagaaaaaatcaaatgGGAGTAAAGATGAAAATGCCAAAAATATGACTGATGTGAATACTACAGAAATAACCAAAGGTGATTATGTAGTAATTCTCTATGAGGGTGAGAAATTCCCAGGGCTAGTAATCGATATTGAAGAAGGAccaaagtttaaaataaaaacaatggcAATGGGTGGTATGGGTATACAGAATAGATGGAAATGGCCTGATAAAGATGATATTCTAGTCTACGAAAGAGaagaaatagttaaaaaaatcttgcCACCCATGCTCTTGAATAGTAGAGGGATTTATTCTGTAAACGTTGATTAA
- Protein Sequence
- MEERKKSQIKKKSKQNMNYNEQNIKLALQQISEGMSVRSASKAFGIPRTTLQDKKFGRHQRSVGAPTILTQDEEKVFTNWIIELGKQGFPVTKDQLLYSVSKYIAENGRSNCFKDGIPGRRWYESFLNRHKEISKRVSQNLSTARANINEEGVRNWHAKIKNFFEEYYLNQVLTDPSRIFNCDETAFYLCPKNKFILAKKGSKQIYNRTTNDEKECLTVLIGASATGCLIPPLTLFPYKRMPQNIVAKMPKNWGIGRTDSGWMTCEAFYEYITNIFYPYLQQNNVEFPVVMFLDGHSSHFSLHLSTFCREKGIILIGLIPNATHLLQPMDVSLFHPLKNEWTKIIYKWRINNNGERLKREDFSGLVNECLQRAAKPETIRNGFKICGLYPFDVNAVPFEKLLKTTADDSEKTESEELEPREKNEDIRSNLSFIESMIGVERLQEFKRCEKTQWNGQPKDEDHNITLEANINFSALELDKNFTANDVIDLDVNADGSVMISTPKSSCADNVQIFGQLDDSPISNLREQRDENDNLENFDKQTLITQKKIFPSPFKNALFWPGTPVSTTKSGKVKRKITPSVAVADEFMAYQIELKNKKDEKLSKSKAKGKKKSNGSKDENAKNMTDVNTTEITKGDYVVILYEGEKFPGLVIDIEEGPKFKIKTMAMGGMGIQNRWKWPDKDDILVYEREEIVKKILPPMLLNSRGIYSVNVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129655; iTF_00868696; iTF_00126627; iTF_00128892; iTF_00868697;
- 90% Identity
- -
- 80% Identity
- -