Basic Information

Insect: Crematogaster levior
Gene Symbol: bab2
Assembly: GCA_901521435.1
Location: CABEGB010000369.1:30801-63089[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.4e-12 2e-09 37.9 0.0 1 39 400 439 400 443 0.90

2 4 2.1e-12 1.2e-09 38.6 0.1 2 39 455 492 454 495 0.94

3 4 3e-18 1.8e-15 57.3 0.0 1 45 509 554 509 554 0.97

4 4 5.5e-18 3.2e-15 56.4 0.1 1 42 561 603 561 604 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.4e-12	2e-09	37.9	0.0	1	39	400	439	400	443	0.90
2	4	2.1e-12	1.2e-09	38.6	0.1	2	39	455	492	454	495	0.94
3	4	3e-18	1.8e-15	57.3	0.0	1	45	509	554	509	554	0.97
4	4	5.5e-18	3.2e-15	56.4	0.1	1	42	561	603	561	604	0.97

Sequence Information

Coding Sequence: ATGAGACGTGAAAGGGATGACGGAAGGGCGAAAGGGAGAGCAGGGCAGAGTTTGGAAGACGAGGACGGCGGCATGGCCGGACAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAATGTGACGTCGGTGTTTCACCAGCTCCTGCAGACCGAAGCCTTCGTCGACGTCACCCTGGCGTGCAACGAGGCCTCATTAAAGGCGCACAAGGTGGTACTGTCGGCCTGCAGCTCCTACTTCCAGAGACTCCTGCTGTCGAATCCCTGCAAACACCCGACGATCATTATGCCGCAGGACGTCTGCTTCAACGACCTCAAGTTCATCATCGAGTTCGTCTACCGCGGCGAGATAAACGTTTCACAAGCGGAGCTTCAGTCGCTCTTGAAGACGGCAGACCAGCTGAAGATCAAGGGTCTGTGCGAGGTGCCGGAAAACACAGACGGTCCGCCACCCGTGAGCCTGAGCTCGCCGCCGAGGGAGTCCGGCACCCCAAGGTTGAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGAGACCCAGAATCGAGCGGCCTACGTTCGAGCCGCGCGCCACCGATTCGAGACATTACGATCGCTACAAAGAGGAAGAGGCCACCAACGATTACAGCCGCGATAACAAAGAGAACCACCGGGACTGGCAGGCTGAAGATGAAGAGTGCACGGAgacagcaacagcagcagtaGCACTGGAAACTTGCcaacgtaataataataacaataacaacaacggTAACGGCACGAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGGCACTATGGCCACCATCCGGATCCCGGAGAGGTCGATTTGCCCCCCGAGACACAACCCACGCCACCCAGCGCCACCCTGGTCGGCACCACTATCACACACTTGAGGGATCCGGATCATCATACAGAGATTCAGAATTGCGACAGCGTCAAAATCAAGTTCGAGACACTGCACACGATGGACTCCTCGGACACGATCGACATAGACAGCCACATGTCGGATCGGGCGAGCGTGAGCTCGAAGAACGCAGCCGACAGCGACAACATGATGATGATAACACCGGAGTTGCTGGGACTAATGCCATCGGGAAGCTCTGGCCAGTCGGACTCGGGCGAGAATAATTCGAGGGGGCACAGCGGACAGTCCAGCTCGCATCATCACGGTTCAAAATCGTGGACGCAAGAAGACATGGACGCGGCTTTAGAGGCGCTGAGGAATCACAACATGAGCCTGACGAAAGCTTCAGCAACATTCGGTATTCCTTCAACGACTCTGTGGCAACGTGCACATCGATTGGGTATCGATACGCCGAAGAAAGATGGTCCCACGAAGTCCTGGAGCGACGAGAGCTTGAACAACGCTTTAGAGGCATTGCGCACCGGCTCCATTTCGGCTAACAAAGCGTCCAAGGCGTACGGTATACCTTCCAGTACGTTGTACAAGATTGCCAGGAGAGAAGGTATCAGACTGGCCGCGCCGTTCAACGCGAGTCCCACTACATGGACGCCCGCCGATCTGGATCGCGCCCTAGAAGCAATAAGATCTGGTCAGACATCCGTGCAGAGAGCGTCAACGGAATTCGGTATACCTACGGGGACCTTGTATGGAAGATGTAAGCGAGAAGGAATCGAGCTTAGCAGGAGCAATCCCACGCCGTGGAGCGAAGACGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGTATAAACCAAGCGGCGATTCACTACAATCTACCATATTCGTCACTGTACGGGCGCTTCAAGAGAGGCAAATACGAAGAACCCGTCGTGGGCGACATCTCGCAGGATGGCACCAGTCCGCATTTCCATCAAAGCCCCAACCAGAATCATTCATCCGCCCTTCCAGATCAAATGTCTTACCCGGGCAGCTGA
Protein Sequence: MRRERDDGRAKGRAGQSLEDEDGGMAGQHYCLRWNNYQSNVTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQRLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEINVSQAELQSLLKTADQLKIKGLCEVPENTDGPPPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPTFEPRATDSRHYDRYKEEEATNDYSRDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNNGNGTSNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSGQSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDISQDGTSPHFHQSPNQNHSSALPDQMSYPGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01520386;
80% Identity: iTF_00385667;