Basic Information

Insect: Crataerina pallida
Gene Symbol: RREB1
Assembly: GCA_949710015.1
Location: OX453291.1:26255047-26261096[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0069 0.47 11.0 0.6 1 21 287 307 287 309 0.96

2 13 0.00034 0.023 15.1 0.2 1 23 319 341 319 341 0.98

3 13 2.4e-05 0.0016 18.7 7.5 1 23 347 369 347 369 0.98

4 13 0.04 2.7 8.6 1.7 2 19 613 630 613 630 0.98

5 13 0.0085 0.58 10.7 0.1 1 23 792 814 792 814 0.97

6 13 0.00042 0.028 14.8 1.7 1 23 824 846 824 846 0.99

7 13 0.00084 0.057 13.9 2.0 1 23 852 875 852 875 0.97

8 13 0.003 0.21 12.1 2.0 1 23 1240 1263 1240 1263 0.95

9 13 8.8e-05 0.006 17.0 0.3 2 23 1574 1595 1573 1595 0.97

10 13 0.15 10 6.8 6.3 1 23 1601 1624 1601 1624 0.97

11 13 5 3.4e+02 2.0 1.8 1 13 1735 1747 1735 1755 0.80

12 13 0.086 5.8 7.5 1.1 3 23 1812 1832 1811 1832 0.91

13 13 0.0014 0.092 13.2 4.8 1 23 1838 1860 1838 1860 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0069	0.47	11.0	0.6	1	21	287	307	287	309	0.96
2	13	0.00034	0.023	15.1	0.2	1	23	319	341	319	341	0.98
3	13	2.4e-05	0.0016	18.7	7.5	1	23	347	369	347	369	0.98
4	13	0.04	2.7	8.6	1.7	2	19	613	630	613	630	0.98
5	13	0.0085	0.58	10.7	0.1	1	23	792	814	792	814	0.97
6	13	0.00042	0.028	14.8	1.7	1	23	824	846	824	846	0.99
7	13	0.00084	0.057	13.9	2.0	1	23	852	875	852	875	0.97
8	13	0.003	0.21	12.1	2.0	1	23	1240	1263	1240	1263	0.95
9	13	8.8e-05	0.006	17.0	0.3	2	23	1574	1595	1573	1595	0.97
10	13	0.15	10	6.8	6.3	1	23	1601	1624	1601	1624	0.97
11	13	5	3.4e+02	2.0	1.8	1	13	1735	1747	1735	1755	0.80
12	13	0.086	5.8	7.5	1.1	3	23	1812	1832	1811	1832	0.91
13	13	0.0014	0.092	13.2	4.8	1	23	1838	1860	1838	1860	0.99

Sequence Information

Coding Sequence: ATGTTGGCCACacaaacagcaataacaacaacaagtaacaCCGTGACCGATACATTAAGCAGCAGTAACGAATGTCCAACcatacaacagcagcagcaggagcaacaacaacaacaacaacagccattacatctatatagaaataaaagtGGGGAAAGCAGCAGTAACGGCAGCACAACGAACACTAATAACAGCACACATATCAAATTGGAACGACGGGACTCTTCCACATCGGAATCTTCGCTGGAACATTTGGATTTAGGTCGTACAccgaaaaaatttaacaaagcCACCACATCCACACCATTTGTGCCGAATGAtaaaagtacaacaacaacaacaaaatcaacaattaCAAATGATTCAATTCAACCTTTACAAACCGTTCATCTGCAGCAGCGTTTACAAGAGTCCGATGATGGTAATGATTACGATGATGAAGAATCATCGGATGAGAAACATACAAGAAACATTAACACCTCCTCAGTAATAATAACACAAAACCTACAACAATCTGAACCACAACGCTTAACACACTACAAACGTCGTTATTGTGGCCGAAATCTGTTAGATAAACGTACCAGCATACAGCTGGAGTATAATCCAGATAATCCGAATTCGTTGCGTAAAAAGTTTCGTTTTAATCGCAGCTCATCGGAGAATGTCACTTGCTCAAATGAATCCGGCTTTGTAGAGGGCAGTCACAGCAGCCTGTTGATCAATAACACGTCCATAACAAACAGTCACAGTCACAGTAAATCGAATACATCCTCGGCTGCCTCCACACCGCCCTATAATCAACAGAATGGTGGCATTTCCAGTCCCGAATCGGGTGTGGGCGAACGTGAGGATATGAAATATGTGTGTCCGATTTGTGAAGTGGTGTCCCCCACCCCCCATGAGTTTACCAATCACATACGTTGTCACAATTATGCTTCAGGCGATACAGAAAATTTCACTTGTCGCATTTGCTCAAAGGTGTTATCGTCGGCTTCCTCTTTGGATCGTCACGTGCTGGTGCATACAGGAGAGCGACCATTCAACTGTAAATACTGTCATTTAACTTTTACCACCAACGGCAATATGCATCGTCACATGCGCACTCACAAACAGCATCAGCATACACATCATCGCCGTAACTCGAATGGGACAAAGCTTattagcagcagcaacaacaataacaaccataataataataaaaatggtgcAGCTGTTGTTACTAATGCTGCAGCTTCTATTATTGCTGCCACTACTCAAAATGCTGCTGGTATTCTGAATAATCCTTCTACCACTACGCTACCATCATACGCTACAGCAGCAAGTAATGGACCGTTACAGGAAGGCGTTAAATCATCAGCAATCAATAATTACAATACCGGCAGTATTGATGCCGTTGATCATTACTCAAGCAACGCTTTGTCAACAGGTGCCCATGGCAATGGCCAGCGTTTGAATGGTTTAACAAATTTCGAAAGTTACGAAAGTGATGGCGGCTGTTCGTCGGATAATTCTACAGCCAACAGTCAATTGTCGCAaagtaataatcataataatgacagcaacaacaacaacaatatcaataaCAATGACATCAAattgaacaataacaactttaAACGTAAATTGTTAGACGATCGTCGTGATTTCGATGACAGGACGATTGAATTAAAACGTTGCTTAAATAGCGATATAATTAATGGTTCTGTTGTTATGCCGGAGCCGCCAACACCTAATGATACCTGCGGACTGGTGTGTCCCGCATGCAACGATAATGATTTCTCTAACATGTTAGATTTAGACAATCATATGGATTCGAAACATCCCGACATCCCAGccaaatgtaaatattgtgaaGTAATATTTCGTACCCATCATCAGCTCAACATACATCCCTGTACCGATGAATTGACTCATCATTTGGCATATGTCAATAAAATGAATGTTACAAGAAGTCTGCCTTTGGGAGAACATTGCTCTAATGATACAGCCTTTGCAAAGGATGATCATACTGCCGGAGAGAGTCAGTTGATGGAAGAAAACGAAAATCAAAGAAAAGAATTCTTCCgacaattttatatgaataaagcCATAACTGAGGCCAACACTCAATACCAAAAAGTACATGAGCAATCATCACAGCCGGATGCTGCCGAAGATGATGTTAAATCGGAACCATCCGCTCATGATTCCAAAGATTTGGCAGATATTCAATCAATTTTGAATATGACATCATCGTCCAGTACTTCGAATTTTCTGAAGAACTTCGAACAAAATGTCAATACACCTTCGTCTCAGTGCAGTTATGATAAGGATGAAGAGGAAGCTCAAGATGCCTTCACGTCCGAATTTCGTAAAATGAAGTTGCGTGGAGAGTTCCCTTGCAAACTCTGTACTGCAGTGTTTCCCAATTTAAGAGCCTTAAAGGGCCACAATAGGGTGCACTTGAGTGAGGCTGGCCTGTCCGGTCCATTTCGCTGTAACATGTGCCCATATTCCAATTGCGACAAAGCGGCTTTAGTTCGCCACATGCGTACACATAACGGGGATCGTCCATACGAGTGTGCCGTTTGCAATTACGCTTTCACTACCAAGGCCAATTGTGAGCGACACTTACGCAATCGTCATGCAAAAACAACACGCGAAGAAGTGAAACGTGCCATTATCTATCATCCCTCCGAGGACAGCTCTTGTGATGATCCCACAAAGAAACTGCATATGTTCTCTTCGCCCGAATgcgatgatgataatgaactGATCATGTGTCATACGATCCAACCGAAGGATCGCTCCACTCCGGTATCTCATTTAAAAGAAATGCTTACCGCGGGTGAAAGTCTTTCAGCCAAGCCGGTAAAGATTCAAGTGAAAAGTTTAGAACAATTATTGGACAAATCTTCTGCTTATCAGGAGAGTTATGAACAAGAAAAGAACAACATCAGCAGCAACAACGAAAGCAACGGTCCTATCGATATGAGTATGGATGCTTTGGACCTCAGCAAGAAATCATCAACCAACCAGCAAAAGAAGCACGCTGACCAAGGTAATCAAGCAGCAGCAAACACCTTTAACAAGCCTGCTCAAGAGCCAAAACCAGTTTACGCGGAAAATGAACCCATTAACCTTGAGAACCCCCTATATGAAGTGTCTGCtttagaaaaacaacaacaacaacaattgtttttaGCTCAACAACAACTGCTCACCAATCCCACACAATACCTACAACAACTCTATCGCAATCTAATGTTGCCACAATTGAGTCCATTCTTCTTGCCAAATTCGTTTATGCCCAACAGCAACTTGGCGGAACTGCAGAAATTTGCACCATTTTTAAGTCGAATGTTTGGCACACCCACGGCCATCACCGCACCCTCAACTGCTGCTTTAAGCGAAGATATAGAAAAAGCATCACTTGCCAATTCATCGAATGCCATGAACTCCCTGCTGCCTCAGATCAGTCCTCTAATGTGTTCGGAAAAATGCAGCCCAAATTCATTGAACTCATTGCCATCTCCCAAGGATATGCAAGCACCGAACCCAGCAACACTCAACATACCTTTACAGTCACTACCACTACCACTACAACTTCCACCACCACCTCCTCCCCCTCCCCATCTAACATCAACTATGCTCTCCAATGCTCCGGTAAAAATGGTCCTCAAAAATGGCGTCTTTATGCCCAAACAGAAACAACGACGCTATCGTACCGAACGACCATTTGCTTGTGAACATTGTTCAGCTCGCTTCACATTACGCTCCAACATGGAACGTCATGTTAAACAGCAGCATCCGCAATACTACGCTCAACGTCAACGTACCGGCCATAATGTGATGAGAGGTCGCGGTGCCAGCAATGCTGGAAATCTAAACAGTATTACGCATCTGCAAGCGGCCTTTGCTCACAATAGCTCCCCGGCGGGTCTCAGTTCATCATCACCCATCTCCGATCAAGTGAAGTACGCTATATTAGCACAACAATTAAAAGCACGCAAAGAAACGGATCTATTGCATCAAGCTTTGTCGCATGGCTCCGGTAATGTCAACAGCAATCACATGTTCCACATAAGTCCATCGAATGGGCCCAATGGGCTTAACTTTATAAACTCCAACACTAGCAATACTCCTAATGGTTCCATGGAAGATGATGAAGATAAGTTAATAATTGATGAAGATGGGGAGGATATTATAGACGATAAAAATGACGGAACTGAAAATAGAGATGAAAATCCTAGCGAAGGTAATATAACTTTAGAGATTAATGAAGAGAGTTATGGCAAAACGAAAGATTCGGAAAATCATGCTGAGAATGTAACTAAATCGATCCTGGAACAAGCCATAAAGGCGGGTCACGGTCATGGCTGTGTAAGTAAAGCGGAATTAAAGAGTGTTCCAGCTCCCAATACCATGAATTCGATGATAGCACAAGCACCAGCTGTTGGGAAGTTTCTTAAAGAAGTAGCCAGCTCTCCGTTTAAGGACGAATCTCAAGATTTAGTTTCCGTTTCCAAATTGGTGGACAACGCTACCAGCAACTCGGTCTCATTTAACAATTACTTTCGTCCCAGTGACCTAACTAATCAAATGGAACATAGCGATGAAGAGGGTTTGGTTGCTTCGGGCAGTGCCAGCGAGAGTAACAATTCGGGAGCAGAAGATACAGCTGTAGTTGCAGTACAACCGAAAAAGAAATCAGCCTACAGCCTGGCACCCAACCGGGTCTCGTGTCCCTACTGCCAACGCATGTTCCCTTGGTCCAGTTCTCTAAGACGTCACATTCTCACGCATACCGGCCAGAAGCCCTTCAAATGTTCACATTGCCCTCTTTTATTCACCACAAAGAGTAACTGCGATCGTCATCTATTACGCAAACATGGCAATATTGAATCCGCCACCTCGGTATATGTGCCCACTGAAGATGTTACCGAGCCAATACCACCGCCAAAGTCTGTTgaggaaattgaaaaaatgcaaCGACAACGAGACGAAGAAGAGCGGAAACGCAAAGCTGATAAAGTACGAGAGCGAGAGGAGAGAGAACGGCTGGAGAAAGAGCAGCAACgggaaaaacaacaaacacaagaacaagagcaacagcaacaacaacagcagcaacatgactttttcaaacaattGGCTGCAGCTCAAATGCAACATTATTCGCACAAATCGGAAACCAGTCAAGTGTCATCTGCTGATCTGCCATTCAAGTGCCATTTATGCGAAAACTCGTTTACCGAACGTTTACAGTGTTTAgaacatataaaatgtatgcaCGCACAAGACTTTGCTTTACTGTTGTCCAAGGGAGCCATTGATAGTGATGCCGAAACGTCGCAGTTAACCTCCAACGAAGAGGAAGAGCGCAATGGACGTGGCCATGAAGATGGCTTAAAACTGGGCAAATATCCCGACTATAGTAACCGCAAGGTTATATGCGCTTTTTGTATGCGTCGCTTTTGGTCAACCGAAGATTTGCGCCGTCATATGCGTACGCATTCGGGCGAACGGCCATTTCAATGCGAAATCTGCTTAAGGAAGTTCACTCTAAAGCATAGCATGCTGCGTCATATGAAAAAACATAACGGTTTAAGTGCCAGTGATGATTGTCAAGCGGGTGGAGATTTCTCAACTAACGCCAATAGCGGTTCCGATTATTCTGATGATGAACAAACCCCTACAATACAACCGAACATACCAACAGCCGCTAACAATTCCCTAATGTTAACGCCCAACATGAATGCTTCGTTTATAGGTAAGAAAATTCAAGAGTTATTGAATAAAGCCAATGAATGGCGATCGAGTAATCTGAACGGTTTAGATGAGCACAAAAGAAATATTACTGAAGAAAGCAACAATATGCAACATACAGACTTAATTGGTAACTTATTGGGTATAAACGATCAGAATATGTTAAATAAGTTGATGTCATCACCGGACGAGGCTGCCAAATTATTAGGTGTCGATAAGTGA
Protein Sequence: MLATQTAITTTSNTVTDTLSSSNECPTIQQQQQEQQQQQQQPLHLYRNKSGESSSNGSTTNTNNSTHIKLERRDSSTSESSLEHLDLGRTPKKFNKATTSTPFVPNDKSTTTTTKSTITNDSIQPLQTVHLQQRLQESDDGNDYDDEESSDEKHTRNINTSSVIITQNLQQSEPQRLTHYKRRYCGRNLLDKRTSIQLEYNPDNPNSLRKKFRFNRSSSENVTCSNESGFVEGSHSSLLINNTSITNSHSHSKSNTSSAASTPPYNQQNGGISSPESGVGEREDMKYVCPICEVVSPTPHEFTNHIRCHNYASGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKLISSSNNNNNHNNNKNGAAVVTNAAASIIAATTQNAAGILNNPSTTTLPSYATAASNGPLQEGVKSSAINNYNTGSIDAVDHYSSNALSTGAHGNGQRLNGLTNFESYESDGGCSSDNSTANSQLSQSNNHNNDSNNNNNINNNDIKLNNNNFKRKLLDDRRDFDDRTIELKRCLNSDIINGSVVMPEPPTPNDTCGLVCPACNDNDFSNMLDLDNHMDSKHPDIPAKCKYCEVIFRTHHQLNIHPCTDELTHHLAYVNKMNVTRSLPLGEHCSNDTAFAKDDHTAGESQLMEENENQRKEFFRQFYMNKAITEANTQYQKVHEQSSQPDAAEDDVKSEPSAHDSKDLADIQSILNMTSSSSTSNFLKNFEQNVNTPSSQCSYDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSEAGLSGPFRCNMCPYSNCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDPTKKLHMFSSPECDDDNELIMCHTIQPKDRSTPVSHLKEMLTAGESLSAKPVKIQVKSLEQLLDKSSAYQESYEQEKNNISSNNESNGPIDMSMDALDLSKKSSTNQQKKHADQGNQAAANTFNKPAQEPKPVYAENEPINLENPLYEVSALEKQQQQQLFLAQQQLLTNPTQYLQQLYRNLMLPQLSPFFLPNSFMPNSNLAELQKFAPFLSRMFGTPTAITAPSTAALSEDIEKASLANSSNAMNSLLPQISPLMCSEKCSPNSLNSLPSPKDMQAPNPATLNIPLQSLPLPLQLPPPPPPPPHLTSTMLSNAPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRTGHNVMRGRGASNAGNLNSITHLQAAFAHNSSPAGLSSSSPISDQVKYAILAQQLKARKETDLLHQALSHGSGNVNSNHMFHISPSNGPNGLNFINSNTSNTPNGSMEDDEDKLIIDEDGEDIIDDKNDGTENRDENPSEGNITLEINEESYGKTKDSENHAENVTKSILEQAIKAGHGHGCVSKAELKSVPAPNTMNSMIAQAPAVGKFLKEVASSPFKDESQDLVSVSKLVDNATSNSVSFNNYFRPSDLTNQMEHSDEEGLVASGSASESNNSGAEDTAVVAVQPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNIESATSVYVPTEDVTEPIPPPKSVEEIEKMQRQRDEEERKRKADKVREREERERLEKEQQREKQQTQEQEQQQQQQQQHDFFKQLAAAQMQHYSHKSETSQVSSADLPFKCHLCENSFTERLQCLEHIKCMHAQDFALLLSKGAIDSDAETSQLTSNEEEERNGRGHEDGLKLGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGLSASDDCQAGGDFSTNANSGSDYSDDEQTPTIQPNIPTAANNSLMLTPNMNASFIGKKIQELLNKANEWRSSNLNGLDEHKRNITEESNNMQHTDLIGNLLGINDQNMLNKLMSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115227;
90% Identity: iTF_01114504;
80% Identity: -