Basic Information

Gene Symbol
lilli
Assembly
GCA_949710015.1
Location
OX453289.1:27054359-27063418[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 7.8e-10 1.4e-05 24.6 24.6 9 196 8 193 2 286 0.52
2 9 0.036 6.4e+02 -0.7 30.9 79 227 362 503 342 516 0.46
3 9 0.45 7.9e+03 -4.3 37.6 405 514 514 664 498 664 0.77
4 9 0.68 1.2e+04 -4.9 13.9 125 242 939 1057 895 1105 0.42
5 9 0.21 3.6e+03 -3.2 14.5 452 491 1129 1168 1104 1175 0.59
6 9 1 1.8e+04 -12.1 31.8 91 245 1198 1354 1174 1388 0.30
7 9 0.027 4.7e+02 -0.3 11.9 398 501 1401 1506 1384 1517 0.53
8 9 0.52 9.1e+03 -4.6 9.4 88 249 1730 1890 1710 1906 0.41
9 9 1 1.8e+04 -6.9 5.3 448 475 2150 2175 2144 2181 0.68

Sequence Information

Coding Sequence
ATGGAAGACTATGATTATGAACGCAAGCAACGTAGGGAACGTGAAAAATCTGAACGACAACAAGTACAAACGGCTGCTAATCGTGAGGTGCTATTTCCTGAACCCCGTCGCGTCCAACCATCCGAAGCTGATGATGATATTGTCCGCAAATTGGGTGACTTCTCGAAAGTCAaagatttcattaaattacATACGGTGGGCATATGGAATGCGGGCCATCGCCAGATACCACCAAATGCTGTGTTGACGGGTATAGTGCCACCCGGCTCAGCATTGAGCGGTGGCGGTGGTGCAGGTCTTACGTCGGGCACTATGGGTACATCATCATCTACATCAACATCAACGCAACGTTTGCCAGCACCACCGCCGCCAACATCACAGCATCAGCAACAGCAGTCATCTTCACATCACCATCAAACacatcaacagcagcagcagcaccagcagcagcaacaacatcaacaacatcaacaacatcaacaacatcaacaacatcaacaacatcaacaacatcaacaacatcaacaacaacaacaacaacaacaacaatcgtcATCGCGGCAATCGGCATCAAGTAATTATGTTAAGCAACCCGATAATAAGCCGCCGTTTAATGGACGGGTTGGTTACACAAATCAACCCCAAAGTCGTTCAGGCAGCGGAGGTATGGCACCTCCGAAAGGCCCAGCACCAGTACCAGCGGGTTCCTTATTACCTCCACCCACTATGACACATATGCCAAATGGACGCCAACTGTCGTCATCATCTTCTTCATCAACGGAAAAGTCCTATTTGGGGCCACTTCCGCCAGCTTTATCTTCAACATCCACGACAACAACTCATAATGGACGGTTTCCACAACCTTCAATACCAAAAATCCGCCAAAAACATTTACCGCCCGAGAATGATATCATAAATATTCTTACCTTGGTGACGGATACATTTTGTCCACCCAAAATGCTCACCGGCATCGATGCCACACCCCACACTACAATTATAGAGAATTATAATCTTAATGAACCCAACAAGCACAAATACTCATTTGATATATCGCGGACAACAAGTACAGTGGACCCATTAGATTCGCCGCCCCGATCGGCAGCAGACATGCCAGCGCCAAATTTTGTGCCACcatcgtcttcttcttcttcaatgTCCAACATAACGAATAATAGCAATAACCATTCTAATAATCCCAATACATCACAGTTGCCTTCGTCTGCCTCTGCCTCCTCCTCATTATCATCTTCCACGTATATAGCCCCCGCCACCCTCAATAGCTCTACCTCTGCTAAAATTGGACAACACAACCAGCACCAGcttcaccaccaccaccaccaacaacaacaacaacaacaacaacaacaacaacaacagaagcattcttcttcatcttctttaGTCGCTACCACCACAAAAACAGCACCTCACCTATCACCTCTAGTGCCCCTATCACCAATATTATCATCATCTAGAACATCGACGGATACGTTATTAAATCGAAAatcaatgaaaattgaaaatcaacTTGGTTCGGGGGCACAGTCGGACAAACATAATGAATCCACATTGGAAAATGACTTGGAATTGTCTGACTCAGAGGATGAACGTAAAAAGCAAAATTGCACCGTACCAAACACAAGTGACAGCTCCGGCACCGATTCCAGTGAATCGGGCAGTGAAGAGTCATCAAAAAGTGAATCACATCAAGTAGAACCTCTGACAATACATTCACAAACGCACCAGCACCAaccacaacagcaacatcaagTTGTGGCTGCTTTGACTTCGAAAAAGAAGTTAAGTAATTATACTGCGGCTGGTAGTTTACGGACTGGTGGTGGCAGTAGCGGAGGCCACAGTAGCAGCAGTAGCGGTTTAGGGTCTTCAATTGGTTCTAGTAATGCCACACCCTGTTCTTCATCGTCTTCATCAAATAAAACGCCATCACCCTCCAATACCACTAAATGGCAGTTAAGTCGTTACTTTAATAAAGCACCGCTACATCAAACACCCACCGAAGATGTGGTCTCACCAACTACCACGGCAGCCGCGGTGGTCAACTCAGTGAATTCAATGAATGTTGTCAATTTAAATATGCCCACAATGTTACCGGGCGGAGCTCAAATCATACCAGAGCCCCCTCAACAATTAACGAACATCAAAAATGAAAGATTGTTAGATGATCAAGGTAATCCGGGTGTCGACGAGGACGACAacgataataatgatgatgacgacgaAGATGATAGTGAAGATGTAAGACGTATGGTAAAGAATACCAAGAAAGCACGACGTAAAGCTGACCAATTGTCAGTAACTTCCATTAAGAACGATACGTCATATCCTCATCATGCAAACTTAGCGGCAGCAGCAGCCGCGTCTTTTCCTACACGGAAGCCTCCAGCCGGACTTAGTGTAACAGCTTTATCACCACTTTTGAGTGACATTAAGAAAGAAGCAGCTGATGTACGTTCAGTGACATCTGGCGGTGGTCTCGTAAATAACTCAGTACAGGTTCCTGTTTTAAATGCTTCAGAATTTGTCGCCATTCCTAGCAATCAAATTAAACATGAGACCCTCGCAATAGCTGGTCACACTACAGTGACGCACTATACCAATGAAAGTTCCTCCCTAAAGCGCCGCAGCAATGATTACGGTATTGAAGGTTTGTCCGGGCTATCCTCGGATACGGACAGTTGCATTGAGGATACACGAGAACGATTACCAGTTCCTGGACCGGGTGGCACTCTGCAAATACCTGGTGTTCCAGCAGCTATTACAGCTCTACCCCGGTCTCCCAATGTTATACAAAAGCAACAGCACCAACAGCCCAACACTCTAACAGTCACGCCCATTGATCCTTTACCAACTAAAACGAAACAATCAAAAttgcaacagcagcagcagcagcagcgcACTAAAAAACCaaggaaaaaagtaaaacaatcGCAACCCATAATAACAGCTGATACCAGTGATGAAGAAGACCCCACTGAAAGTCGTAAAGGTTCACGCTTATTAATCGCAGCTGGGCCaacaaataatgtaaaaagcATTACCAGTGCTGGTGGTACTAAGAAAGGTAGAGGACGACCAAGAAAAGTTGCCACTCCCAACCAAAGTGAAAATTCGGCTTCTTCGGCGTCTACTTCTACCAAAGGTCCAACACTTACTGCTAAAAAAGATATTACGAAAAAAGTAACTGGTGGCACAACTACTAATGGATCGCGACGCAGACTGTCTCGTCAAAATTCGGTCAATTTACCGTTTCCAGGGGGTCTTACCGGCAAAGAACATGTAAATGTGCACAATATCGGATCAATGCAGACAACCGCAACACCTCTCATAACAGCAGCAGCCATGCCCAAATTAAATACGCCCGATTTAGCTACTAGTGATGATAGTTCCTCTTCAACGGACTCGTCCACAGACAGCAATACTAGCTCAACGACTGATAGTGAAGAAGAGACTACGACCAAAATAAAGGAGCAACAACGTCAGCCGCCGCTCCCATCAATATCCGTGCATTCTTCTTCGGATGAGAACGCTGCATCCGCTACAAGTCCGATTCATAAAAAACCTTCAATAAAAGTGATACCGGAAGAGTCGACTAAACGTCCAACCAAGGGACCAAGGCGTATAGTCAAACAATTGAACCGCCGAAAATCAACAATCGTGGAGGATATGACCAGCAGTACATCATCCTCGTCAAAAACGGCAACAGGTGGAGTTAACGCAATGTCAATGTCTTCATCATCCTCCTCATCCACTGATAGTTCAACTGAAGACTACATACCTTCCAATACTGCCGCCTCAACAACGACTGCGGCACCAACAACAGCGCACCATCATCATTTAACCACGAGCAGTAATACCTCACGACTAACAAACAATCGATTGTCACCTTATAAAACGACAACGACGACGACAACAATTGCAGGTTCATCCTCTTCCAGTAGGAGTCGTAAACTTACTTCATGTTCCAGTGCCTTTTCTTCAGAATCCAgtgtagatgatgatgataactCGGACAGCGATTGTGTTGAAGACACAACCACCGCAACCGCAACCAACCATAAGGAAAAGAAGCTGAGGCGTGATAAACCAAAAAgtgataaaaacaaaatcaatacGTTAACGCGTATATTTAAAACATCTAATGAGGGTGGTGCCAAGAAACAAGGTCAGGTGGTTATTGTTGATCAGTCGGAGGAGCAattacaacagcagcagcagcagcagaagTATATTTCTCCAGCTCTAAGAGCAAGTCAggaaaatttatcatttagtGGTCATCACACCCCAACGGGTCAGTCTCCCAGATTAACGCCAGGTAGTCATATGCGATCGCCACGATCTATACCGCTACCACAACATACACAACCGATGGCTGCTTCAGGTTTAGTGGGGTCGGTGTCGGCATCGACTCACAGTACTTCAGATCGTAGCGCATCCTCAACAAGCAGCGAACGTAAGGTACAGCAGCGTATAAAAACGCCAACAAGAACTCCAACCCGGACACCGCCCACTACAAGAACGCCTACGCCCACACTCATGTTGAATACAACGTCAACTACTCAGCCGCTGCCTCTGCACTCACCGTTACTTTGTAAAATTGATCTCTCGCGATTGTTGCGACTGCCACCCGAATGGCAGCATAATTCCTCTAGAATATATGGGCACACAGCGGTACGTACTCCAACAGCTGTGTACGATCATGAGTCAATTTTAAATGCCGACCTGCAGTCGTCTACAACGCAAATGCGTTTAACTCATTCCTtaaatggtggtggtggcagcGGCGGCAGCGCACTCCCCCGAAGCTCTGCAGGTGGCCGAACAGCTACTAGTGAAACAATGCGTTCACGTGAAAACTTACAGGAAACCGGTACAACACCGGTTAACAGCAAACAACGTTTAAGTAAATCACCCAAAGATCATTTACttttaccaccaccacctaaTGGCTACACAGCCAAAGGTCACAATGTTACTGCCATACATGCCATGAATTCGCCGAGCAAAGGTGGCGGCAAACAACTGCTCATGTCGGGAGTAAAACATGAacacaatattaaatatgaaCCAGACGGAGAGACATATGAGATGAAATTCAAAGTGGGTAGTGAGACAAGTCCTCTAATCAAGCAAGAACTCTTTCTATTAAAGCAAGACTATAAGCCGAACGATTTGACATTAATGACTGATAAGCAAAGACTATCACCGCCAGACATACAAGTGGAGACGAAACTGAAACGTAAACACACCTCCACCTCTAGTCCATTCAAAGAGAAAAAGCGGAAAAAGGATAAGGAGCTGTTGGCTGCTGGCGTCATGATGGCTACTGACAAAGAGAAACACCTGAACGCCACAGCGGCAGCGTTGAGAGACGTCACAGCagtaacaacaaaagaaaaggaaaCGGCCAATCATTTGTATACTCCTGCTAAAAACCATTTCATTGATGATCATTCAGTCTTATATACGAAAGGCAATGCTGCACCAAATCCgAAAAAACAGCCTGTAGATCAGCAAATACCTCCGACTAATCACGACCGGCAGCACCACTATCAGCAACAGCAATTGATGAAAACCCATAGTATCAGTAGCACTGCCAGTCCTGCGCATTTACAAAATCAAACCATCAATAGCACAAGCGAGAGCGGACCCGACGCTTCAGTGATTATGCCCCCGCCAGCGAATGTTGGCCCCTTAACAGCGGCTTGCAAGGTTGGCATAATCATGAATCACAATACCGTCATGTCACCGTCGTTCCAAACTATTAATGATGGCTATCTAAACATGCCAGTCTCGCAACAATCAAATGTTGAACATGCCACATGTTCTTCGTGTCTGAATGCCACGGCGACTGTAACGCAACCGCCACAAGTTATTTATCGGTCATATTTTGAACGGGACGAGGACGGTTTCAATGAAGATTTCAGAAATGATTCGCAATATATGAAGGAGGCCATAGATCGTAAACATGCTGCCGACCGTGAAACAAATTGCTTCAAACAACTAACCTTATATTTGGAGGCTGTGATATATTTTCTAGTATCAGGTGCTGCCATGGAACAGCACAGTCGTTCGGAAGAGGCTGCCTGGACAATGTATCGTGACACACTTTCCTTGATTAAATTTATTTCATCGAAATTTCGTCACATGCAAGTCTCCTCAGCCAGCCAGCatgaaacaaacaataaagtTGCGATTTTAAgTCTTCGTTGCCAATCGTTAATTACGTTAAAATTGTACAAGTTGAGAAGAGGTTTCTGCCGTCAGTTCAATCAAACCTGTGCAGATTATTTTAAACCACCTAAAAAGGAGACCGGTATGAATGGTAATGGTAATGATAGTGTCAATGGTAGAACATCAGCTGATATGACAAATGGTCGTGGTGGCGGCAGCGGCGGTGGTGTTGATACAGGTCCAGTTAATAGTAATAGAGCTGATGTGGAAAATGCGCATTCATCAATATCGCCGTCAAATTCGGCTGGATCTCATaGTTCCGGTTCGAATACGCCACCATCTAAAATAGTGCCTCTAGATATACATTCTGCCTTGcagcatcagcatcaatatttcaattatttaacaaatagtCACGATTTGTGGGATCAAGCCGATCGTCTAGTTAGGCAAGGCAATCATACAAGTTTTTTTATAGCTTTGGATCATGAGAATGGTCCGTTAACGTTGCATAGCAGCGTTTTTGAAGTGTTTCGTTATGTACAGGCCGGTTTGGCTAAATTGAAAGAAGAAATGTCAACAAATCCGAATGACGAGAAAGGTCCAGTGCAGTGA
Protein Sequence
MEDYDYERKQRREREKSERQQVQTAANREVLFPEPRRVQPSEADDDIVRKLGDFSKVKDFIKLHTVGIWNAGHRQIPPNAVLTGIVPPGSALSGGGGAGLTSGTMGTSSSTSTSTQRLPAPPPPTSQHQQQQSSSHHHQTHQQQQQHQQQQQHQQHQQHQQHQQHQQHQQHQQHQQQQQQQQQSSSRQSASSNYVKQPDNKPPFNGRVGYTNQPQSRSGSGGMAPPKGPAPVPAGSLLPPPTMTHMPNGRQLSSSSSSSTEKSYLGPLPPALSSTSTTTTHNGRFPQPSIPKIRQKHLPPENDIINILTLVTDTFCPPKMLTGIDATPHTTIIENYNLNEPNKHKYSFDISRTTSTVDPLDSPPRSAADMPAPNFVPPSSSSSSMSNITNNSNNHSNNPNTSQLPSSASASSSLSSSTYIAPATLNSSTSAKIGQHNQHQLHHHHHQQQQQQQQQQQQQKHSSSSSLVATTTKTAPHLSPLVPLSPILSSSRTSTDTLLNRKSMKIENQLGSGAQSDKHNESTLENDLELSDSEDERKKQNCTVPNTSDSSGTDSSESGSEESSKSESHQVEPLTIHSQTHQHQPQQQHQVVAALTSKKKLSNYTAAGSLRTGGGSSGGHSSSSSGLGSSIGSSNATPCSSSSSSNKTPSPSNTTKWQLSRYFNKAPLHQTPTEDVVSPTTTAAAVVNSVNSMNVVNLNMPTMLPGGAQIIPEPPQQLTNIKNERLLDDQGNPGVDEDDNDNNDDDDEDDSEDVRRMVKNTKKARRKADQLSVTSIKNDTSYPHHANLAAAAAASFPTRKPPAGLSVTALSPLLSDIKKEAADVRSVTSGGGLVNNSVQVPVLNASEFVAIPSNQIKHETLAIAGHTTVTHYTNESSSLKRRSNDYGIEGLSGLSSDTDSCIEDTRERLPVPGPGGTLQIPGVPAAITALPRSPNVIQKQQHQQPNTLTVTPIDPLPTKTKQSKLQQQQQQQRTKKPRKKVKQSQPIITADTSDEEDPTESRKGSRLLIAAGPTNNVKSITSAGGTKKGRGRPRKVATPNQSENSASSASTSTKGPTLTAKKDITKKVTGGTTTNGSRRRLSRQNSVNLPFPGGLTGKEHVNVHNIGSMQTTATPLITAAAMPKLNTPDLATSDDSSSSTDSSTDSNTSSTTDSEEETTTKIKEQQRQPPLPSISVHSSSDENAASATSPIHKKPSIKVIPEESTKRPTKGPRRIVKQLNRRKSTIVEDMTSSTSSSSKTATGGVNAMSMSSSSSSSTDSSTEDYIPSNTAASTTTAAPTTAHHHHLTTSSNTSRLTNNRLSPYKTTTTTTTIAGSSSSSRSRKLTSCSSAFSSESSVDDDDNSDSDCVEDTTTATATNHKEKKLRRDKPKSDKNKINTLTRIFKTSNEGGAKKQGQVVIVDQSEEQLQQQQQQQKYISPALRASQENLSFSGHHTPTGQSPRLTPGSHMRSPRSIPLPQHTQPMAASGLVGSVSASTHSTSDRSASSTSSERKVQQRIKTPTRTPTRTPPTTRTPTPTLMLNTTSTTQPLPLHSPLLCKIDLSRLLRLPPEWQHNSSRIYGHTAVRTPTAVYDHESILNADLQSSTTQMRLTHSLNGGGGSGGSALPRSSAGGRTATSETMRSRENLQETGTTPVNSKQRLSKSPKDHLLLPPPPNGYTAKGHNVTAIHAMNSPSKGGGKQLLMSGVKHEHNIKYEPDGETYEMKFKVGSETSPLIKQELFLLKQDYKPNDLTLMTDKQRLSPPDIQVETKLKRKHTSTSSPFKEKKRKKDKELLAAGVMMATDKEKHLNATAAALRDVTAVTTKEKETANHLYTPAKNHFIDDHSVLYTKGNAAPNPKKQPVDQQIPPTNHDRQHHYQQQQLMKTHSISSTASPAHLQNQTINSTSESGPDASVIMPPPANVGPLTAACKVGIIMNHNTVMSPSFQTINDGYLNMPVSQQSNVEHATCSSCLNATATVTQPPQVIYRSYFERDEDGFNEDFRNDSQYMKEAIDRKHAADRETNCFKQLTLYLEAVIYFLVSGAAMEQHSRSEEAAWTMYRDTLSLIKFISSKFRHMQVSSASQHETNNKVAILSLRCQSLITLKLYKLRRGFCRQFNQTCADYFKPPKKETGMNGNGNDSVNGRTSADMTNGRGGGSGGGVDTGPVNSNRADVENAHSSISPSNSAGSHSSGSNTPPSKIVPLDIHSALQHQHQYFNYLTNSHDLWDQADRLVRQGNHTSFFIALDHENGPLTLHSSVFEVFRYVQAGLAKLKEEMSTNPNDEKGPVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-