Basic Information

Insect: Craniophora ligustri
Gene Symbol: stc
Assembly: GCA_905163465.1
Location: LR990964.1:12433397-12445103[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3e+04 -4.4 1.6 15 19 544 548 543 548 0.81

2 13 0.041 6.1e+02 1.3 1.2 2 10 576 584 576 584 0.93

3 13 3.9e-05 0.57 10.9 18.1 4 19 592 607 590 607 0.93

4 13 1.5e-07 0.0022 18.6 11.5 1 18 643 660 643 661 0.98

5 13 0.00056 8.2 7.3 15.2 1 18 702 719 702 720 0.97

6 13 1.9e-05 0.27 12.0 12.7 1 19 761 783 761 783 0.87

7 13 2 3e+04 -5.4 2.2 6 10 813 817 813 817 0.94

8 13 0.0035 51 4.7 7.4 1 11 823 833 823 834 0.95

9 13 0.045 6.6e+02 1.2 0.3 4 10 838 844 837 845 0.93

10 13 3.9e-06 0.058 14.1 14.0 3 19 852 868 850 868 0.92

11 13 0.00041 6 7.7 9.6 10 18 915 923 912 924 0.92

12 13 4.7e-08 0.00069 20.3 14.0 1 17 960 978 960 984 0.85

13 13 0.0019 28 5.5 9.1 1 16 990 1007 990 1013 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3e+04	-4.4	1.6	15	19	544	548	543	548	0.81
2	13	0.041	6.1e+02	1.3	1.2	2	10	576	584	576	584	0.93
3	13	3.9e-05	0.57	10.9	18.1	4	19	592	607	590	607	0.93
4	13	1.5e-07	0.0022	18.6	11.5	1	18	643	660	643	661	0.98
5	13	0.00056	8.2	7.3	15.2	1	18	702	719	702	720	0.97
6	13	1.9e-05	0.27	12.0	12.7	1	19	761	783	761	783	0.87
7	13	2	3e+04	-5.4	2.2	6	10	813	817	813	817	0.94
8	13	0.0035	51	4.7	7.4	1	11	823	833	823	834	0.95
9	13	0.045	6.6e+02	1.2	0.3	4	10	838	844	837	845	0.93
10	13	3.9e-06	0.058	14.1	14.0	3	19	852	868	850	868	0.92
11	13	0.00041	6	7.7	9.6	10	18	915	923	912	924	0.92
12	13	4.7e-08	0.00069	20.3	14.0	1	17	960	978	960	984	0.85
13	13	0.0019	28	5.5	9.1	1	16	990	1007	990	1013	0.74

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATACATATGCTTACAATAACCAGTACCAAACCTGGAATGGTGACCCCAACAATCAATATGTGAACCAAGCCTACTACCCCAATAGAGCAGAGCCAACAAACCAATATGTTAGCTTCAATGAGTTTCTTTCTCAAATGCAAAACAGTGGCACGCCCAACACTAGCGAATATAATAATGCGCAATACGAAAACTACCGTACAAGCCAATATAATTATCAGAATTTACCTTCCACCTCTCAAAATCCGCAATTAGAAAGCTATGGATATGCAGCAAACTCACCCAGTGTTTCCAGTGGTACTGAAACATACCCAATGAATGTACAAAATAATTATAACCCAGTAGGATCCAATCCTAATGCTTACACTAATGCAATGATACTCAAATCTAATCTCACTCCAACAGCTACTGAATTTGTGCCAAAATCTTCTATGATGACACCCTCAACTAGCACTCAGAACATTCCTGAATCTAGTTCAATAAATGAAGATATTGATACTAGAAATAATTATACTGATGTTAGTGAATCTAGGAATCCTTATAGTAGTCCGAATGAATCACGAAATAACTATCCTAATATTGCTGAACCTCGGAATAACAGTAATAGTTCCACTGATACTAACTGGAGAGAAAGACCACAAAGCTCTCAACAAAAGAGTGAGTCAAACCATAAAAGTGAATCATATCAACGTCCCCAAGACACATATAGGAACCAAGAATCAAATGGTCGCCACCGCGACAACTATCGTAATAATGACGCGAATGGGCGTCATCACGATTCTAATAACCGCTATCAAGACTCAAACTCTCGTAACCAGGAATCAAACAACTGGGGTCCAGAATCAGATAGTAGGCAATATGAATCTAGTAGCCGTCAGCAGGACTCAAGTAGTCGAAACTATGAGTCAAATAACCGAAACTATGATACTAGTAATAAAAAGGGCCAATCAAAATCAAACTATAAGTCAAAGAATAAAGATGATGCTCGTACATTCTACAACAGTGCAATAAGTAAAGATAGTCAAGATGTAAGGAATGGTAGAGGGGATGGCACTGGGCGTGGAAAGAATTGGAGTGGAAGTCAGCGACTTCGAGCAATAGACCGCAATAGCACTGAAGATGAACAATATGCCAATACTTATTTACAAGGCAGAGAAGAAAGAATGGAAAGAGACCACAGAGATAGGGACAGAGATCACAAAGAAAGAGATAGGGATACCAGAGAGAGGGATAGAGAGACCAGAGACAGGGATAGAGAAACCAGGGAAAGGGATAGAGAAACTAGAGAAAGGGATAGAGAAACCAGAGAGCGGGAGAGAGATGCCAGAGACAGGGAGAGGGAAGTCAAGGAAAGAGAACGAGCTTCAAAGTCGGACAATATTCCTAGTCCTGCTCGATTTAAGAGCAAACAACATTATGATCAAGTTAACAAGGAAATGACCCAGCGTGAACGTCTTACAGAACAACTAGACAAAGGAACCTTGGAATGTCTGGTCTGCTGTGACAGAGTGAAACAATTTGACCAGGTCTGGTCATGTAGCAACTGTTACCACGTACTGCATCTTAGATGCATCAGGAAATGGGCCATGAGCAGTATGGTTGAGGGCAAGTGGCGTTGTCCAGCATGCCAGAATACGAACGAGACCATACCGACGGAGTACCGCTGCATGTGCGGCGCGGTGAGGGCGCCTGAGTACCAGCGCGGCGCCGCGGGCGCGCACACGTGCGGCCGCGCCTGCCGCCGCGCCCGCGCCTGCCCGCACCCCTGCACGCTGCTCTGCCACCCAGGGCCCTGCCCACCCTGCCAGGCCACCGTTGTCAAGCAATGCGGTTGCGGTGCGGAGACCCGCTCGGTGTTGTGCAGTAGCAAGTTGCCGCAGGTGTGTGGGCGCGTGTGCGGGCGCCCGCTGCAGTGCGGCGTGCACAACTGCGCCAAGGACTGCCACGAGGGACCCTGCGACAACTGTGCCGAGACTGTGGAACAAGTGTGCTACTGCCCGGCGGGCAAGTCGCGCTCGGTGGCGTGCACGGCGGAGAGCGGCGGGCGCGCGCGCTGGGCGTGCGGCGACACGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGCGCGCCCTGCCACCTGCTGCCGCAGCACGTGCGCACCTGCCCCTGCGGGAACACGCAGTTAGCGAAAGACTCGCGCAAGACCTGCACGGACCCGATTCCCTTGTGCGGTAACATCTGTGCCAAGCCGCTACAGTGCGGCCCGGCGGGCGACAAACACTTCTGCAAACTTAATTGCCATGAAGGGCCCTGCCCTGAATGTCCGGATAAGACGGTGCTGCAGTGTCGCTGCGGCCACTCCAGCCGCGAGGTACCCTGTGCCGATCTGCCGGAGATGTACAACAACGTGCTGTGCCAAAAGAAGTGTAATAAGAAGCTGTCATGTGGTCGGCACCGCTGCCGCACAGTGTGCTGCGCAAGCGCATCTCACCGCTGCGCCGTGGTGTGCGGGCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGTTTCGATGAGCTGACGTGCGAGTGTGGCACGGAGGTGATCCTGCCGCCGGTGCGGTGCGGCACGCGGCCGCCCGCCTGCACGGCGCCCTGTATACGGGAGCGGCCGTGCAAGCACCCGCCGCACCACTCCTGCCACTCCGGGGACTGCCCGCCCTGCGTTGTGCTTACCACTAAACGCTGCCATGGAGACCACGAGGAGCGCAAAACGATACCGTGTTCGCAAGAGGAGTTCTCATGTGGTCTTCCTTGTGGAAAACCGTTACCATGCGGCAAGCATACCTGCATCAAGACTTGTCACAAGGGACCCTGCGACACTGGCAAGTGTACGCAACCGTGTATGGAGAAGCGTCCCAGCTGCGGGCACCCGTGTGCGGCGGCGTGCCACGCGGGGGCGGAGCGCGCGTGCCCCAGCAGCGCGCCGTGCCGCCGCGCCGTGCGCGCCACGTGCCCCTGCGGCCGCCGCGCGGCGCAGCGCCCCTGCTGCGACAACGCCAGGGACTACGCCAAGATGATGAGCGCTCTGGCTGCTACAAAGATGTCAGAAGGTGGCTCCGTAGATCTGTCCGACGTGCAGCGACCCGGAAATATGCTCAAAACGCTAGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGTTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCAGCTCGTGCACGACAAGCTCACCGACCTCGTGCAGCTCGCCAAGAAGTCAAAACAAAAGACCCGAGCGCATTCATTCCCATCTATGAACCGGCAGAAGCGCCAGTTTATTCACGAGCTGTGTGAACACTTCGGTTGTGAGAGCGTCGCGTACGATGCTGAACCCAACAGGAACGTCGTAGCCACCGCTGACAGGGAAAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGCGCGCGCCGCCGCCCGCGCCCGCGCCGCGCGCCGCGCCGCACGCGCCGCACGCGCCACCCAACAAATCAACAAGCGGCTGGGCAACGTTAACGTCGACGAACGCGTGGGCAGCTCGAAGCCAACCGAAACCGCAGCAACCAGCGGCACCGGCAGAGAAGATCGACTATTTCGACAACCCGCCTGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQTWNGDPNNQYVNQAYYPNRAEPTNQYVSFNEFLSQMQNSGTPNTSEYNNAQYENYRTSQYNYQNLPSTSQNPQLESYGYAANSPSVSSGTETYPMNVQNNYNPVGSNPNAYTNAMILKSNLTPTATEFVPKSSMMTPSTSTQNIPESSSINEDIDTRNNYTDVSESRNPYSSPNESRNNYPNIAEPRNNSNSSTDTNWRERPQSSQQKSESNHKSESYQRPQDTYRNQESNGRHRDNYRNNDANGRHHDSNNRYQDSNSRNQESNNWGPESDSRQYESSSRQQDSSSRNYESNNRNYDTSNKKGQSKSNYKSKNKDDARTFYNSAISKDSQDVRNGRGDGTGRGKNWSGSQRLRAIDRNSTEDEQYANTYLQGREERMERDHRDRDRDHKERDRDTRERDRETRDRDRETRERDRETRERDRETRERERDARDREREVKERERASKSDNIPSPARFKSKQHYDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQFDQVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNETIPTEYRCMCGAVRAPEYQRGAAGAHTCGRACRRARACPHPCTLLCHPGPCPPCQATVVKQCGCGAETRSVLCSSKLPQVCGRVCGRPLQCGVHNCAKDCHEGPCDNCAETVEQVCYCPAGKSRSVACTAESGGRARWACGDTCARVLACGAHVCRAPCHAPPCAPCHLLPQHVRTCPCGNTQLAKDSRKTCTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHRCRTVCCASASHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFDELTCECGTEVILPPVRCGTRPPACTAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAACHAGAERACPSSAPCRRAVRATCPCGRRAAQRPCCDNARDYAKMMSALAATKMSEGGSVDLSDVQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQLVHDKLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPPAPAPRAAPHAPHAPPNKSTSGWATLTSTNAWAARSQPKPQQPAAPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809740;
90% Identity: -
80% Identity: -