Basic Information

Insect: Craniophora ligustri
Gene Symbol: Zfa
Assembly: GCA_905163465.1
Location: LR990958.1:11595937-11604729[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0035 0.33 12.2 1.0 3 23 207 228 206 228 0.96

2 23 0.15 14 7.0 0.3 1 22 609 630 609 630 0.95

3 23 5.5 5.2e+02 2.1 0.4 1 22 672 693 672 695 0.82

4 23 0.0016 0.15 13.3 1.7 3 22 706 725 704 725 0.94

5 23 0.17 16 6.9 0.1 3 23 734 755 732 755 0.89

6 23 0.013 1.2 10.4 0.2 3 23 776 797 774 797 0.96

7 23 0.0027 0.26 12.5 3.5 1 23 803 826 803 826 0.95

8 23 0.092 8.7 7.7 0.0 1 23 852 875 852 875 0.90

9 23 0.014 1.3 10.3 3.4 1 23 880 902 880 902 0.97

10 23 0.0063 0.59 11.4 0.2 1 23 908 931 908 931 0.95

11 23 0.0017 0.16 13.2 1.3 1 23 944 966 944 966 0.97

12 23 0.00013 0.012 16.7 1.8 1 23 1016 1039 1016 1039 0.97

13 23 0.005 0.47 11.7 1.8 1 23 1099 1122 1099 1122 0.96

14 23 0.0017 0.16 13.1 2.1 2 23 1148 1170 1147 1170 0.95

15 23 0.029 2.7 9.3 0.1 2 23 1176 1198 1175 1198 0.94

16 23 0.0073 0.68 11.2 0.2 1 21 1242 1262 1242 1263 0.95

17 23 0.00031 0.029 15.5 1.0 1 23 1273 1295 1273 1295 0.93

18 23 8.2e-05 0.0077 17.3 0.3 2 23 1389 1411 1389 1411 0.93

19 23 2.9e-07 2.7e-05 25.0 1.4 3 23 1418 1438 1417 1438 0.98

20 23 0.022 2 9.7 0.4 1 23 1457 1479 1457 1480 0.95

21 23 0.14 13 7.2 0.0 1 23 1502 1524 1502 1524 0.97

22 23 0.02 1.9 9.8 0.6 1 23 1530 1553 1530 1553 0.95

23 23 0.00019 0.018 16.2 0.4 1 23 1561 1584 1561 1584 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0035	0.33	12.2	1.0	3	23	207	228	206	228	0.96
2	23	0.15	14	7.0	0.3	1	22	609	630	609	630	0.95
3	23	5.5	5.2e+02	2.1	0.4	1	22	672	693	672	695	0.82
4	23	0.0016	0.15	13.3	1.7	3	22	706	725	704	725	0.94
5	23	0.17	16	6.9	0.1	3	23	734	755	732	755	0.89
6	23	0.013	1.2	10.4	0.2	3	23	776	797	774	797	0.96
7	23	0.0027	0.26	12.5	3.5	1	23	803	826	803	826	0.95
8	23	0.092	8.7	7.7	0.0	1	23	852	875	852	875	0.90
9	23	0.014	1.3	10.3	3.4	1	23	880	902	880	902	0.97
10	23	0.0063	0.59	11.4	0.2	1	23	908	931	908	931	0.95
11	23	0.0017	0.16	13.2	1.3	1	23	944	966	944	966	0.97
12	23	0.00013	0.012	16.7	1.8	1	23	1016	1039	1016	1039	0.97
13	23	0.005	0.47	11.7	1.8	1	23	1099	1122	1099	1122	0.96
14	23	0.0017	0.16	13.1	2.1	2	23	1148	1170	1147	1170	0.95
15	23	0.029	2.7	9.3	0.1	2	23	1176	1198	1175	1198	0.94
16	23	0.0073	0.68	11.2	0.2	1	21	1242	1262	1242	1263	0.95
17	23	0.00031	0.029	15.5	1.0	1	23	1273	1295	1273	1295	0.93
18	23	8.2e-05	0.0077	17.3	0.3	2	23	1389	1411	1389	1411	0.93
19	23	2.9e-07	2.7e-05	25.0	1.4	3	23	1418	1438	1417	1438	0.98
20	23	0.022	2	9.7	0.4	1	23	1457	1479	1457	1480	0.95
21	23	0.14	13	7.2	0.0	1	23	1502	1524	1502	1524	0.97
22	23	0.02	1.9	9.8	0.6	1	23	1530	1553	1530	1553	0.95
23	23	0.00019	0.018	16.2	0.4	1	23	1561	1584	1561	1584	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTTGGATGACTCGGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTTAAAAATGTATGTAAAAGGACACAAAACAAACTACTGTCTCTGAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAACCATTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTGTCAAATAAATTACAGCCTGAAGGTCCCCCGATCTTGGCTTCACTGGGGCTCACACCGAGGAGTGATAAGGGAGGGGAAGAGAGTGAAAACAATGAAGAAGACGAGGAAGAAATGAATGAGCCAGAGCCTCCACAAACATTCCCGAAAATGCCTCACATGCCGGAGGTGTCTATCACAGTCATGAGACCTACAGGTGAAACTCTCCACGCTCGCCAAGGCATTCATCAACTCGCCTCAAAAGACTGCCTCGTCTGCGGGCGATCTTACAGGTACTCACACAACGCCCGCCGACATGAACTTACCGCTCACAGTTTCGACAGGTATACAAACAAAATAACCCCTAAGAAAACCCTCACTCACCTACAACCTAAACTTAGACCTAATCCATTTAACCCCAAAGCACGGATGATGCCGAATCCTATTAGCCATAAGATGCAATTCATGAACAAGAATGTCTCAACAAAAGTAGTGCCAGTAAACAAAGTTATAACACCACAAAAACCCATTCCAATAAAGTCATCAAAGACAACACAAAATAATTTACCATATCCTCTACGTATTAAAGCCCTCAAGGATTTACAAATAAAGAAGAAGGAGCCTCAGATCCTAAAAACTTTGTTGACCTCCAAACCTGAAGTTTTGGTATCAGAGCCCGAGATATTAAATTCTGGTCCAGAAAGCCCTGAGACATTGATATCCGAGCCTGAAATTGCATCTTTCCAAGTTGAAGCTATTCTTACGGAACCTGATACAGATGCCTATGATCCTCAACAAGGTGACGAAGAAGCTGATGAGGAAATTCAAAACAACCAAAGTCAAAACTATGAAGCGGTAGATATGGAATCAGATAATGAAATTGAGATAGCTCGCCAGCAAGGCATTGATGAACACGAGGGCGAGGAATATGCTGATGGGGAAGAGAATGTCGACCAATGTGATGATGAGAACAATATGGAAGGCGGTCAGAGTGATATCGAAAAAGATGGTCATGATGATACAGTAGAAAGTCAGGATCAAGAGGACGATAGTGTTGATATAAAGGCTGAGGGTGAAGCAAAGGATGAAGAGGGTCAAGATGAGAGAGAACATGAAGAAGAAAATGATATGAATCATAATGAAAATGCGGACGAAGACGATGACGACCTTCCAATGACATTGGCACCAGTCGTCGAAATAAACGAAGGCTTACAAGTCAACTCATTTAATGAAGGAGACGAGGAACTTGACGAGACTGTTGATCCCGATGAAACTATAGAAGATGAGGAACAGGTGAAAGAGCTTGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGATTTTATCCAAAAATATCGTGATATAATTCAGCAAATTAATACCAAGCGTTGTTTGTGTTGCGACCGGGAACATCCCCGTAGGAAAGCGGTCATACAGCACTTACAGAAAAATGGTCACAAAGTGCCAAAACACACGTGCTACAACTGTGTCATCACATTTGGACATATTGGCGCACTCCTAAGTCATATGAGGTCGAACTCTTGTACTAATTTATGGAAGATTATTTATAATGAAAATGGCATTACTGATGACTTGGTTCTAGAAGATGAACCTAAAGAGGTCAAGGTTCAATATAAAGATATCTTTAATGCTAGATCTTACGCATGCAAACTTTGTCCAGCTAAGTTCCAGCTGAAACAGTTTATAATGAAGCATGTCTTAGATACACATGAAGATGGACAATCCAGAGTGCCTCTGGCTTGCGTGCATTGCCGTTCCCGATTTAAAGATAAAAGCCTACTCAAGAAACACATTCGTAAAGGTGAATGTACAGTATATATTGCTTGCGATTTGTGTACAGAAAAGTTTAGTAATATGCAGGACTTCAACGACCACGCTCTGGGTGTTCACGCTGGCAGTTTCGATCAGTCAGATAATCAGAGCAAATGTGTTGACGGTAGACCAACTGACTGCCCGTTGTGCGGAAAGAAAAACAGCAGCTATCCGAATTTAGTAAAACATTTAAAGATTATTCATAGTGAGGAAAAACCTCATTACTGCCAACATTGTGATTCTAAATTCGAACAAGCTACTGATTTAAATAAACACATTTACATGGAGCATTCTGACAGAACATTAGGCATGTCGTCTGTTGAACCGGATATGTCCATTGTTAAGGAAGAAGCAGAGGAGTATCATTATTCATGTACAGAATGTAATGCTATATTTGAAACTGTGGACGCGTGGACTGATCACCAAGTAGCCGAACATAATCAAGTGGCCCATCACTGTGACCAGTGTGAGAAGAAATTCCTCCGGCCTTCGGAACTCGCGGAGCATAAAAATACTCACTTGAGGGTTAAATTCTATCCTTGCAGTGTATGCCCGAACTCATACAGCACTCCGCAGAAATTGTCTGAGCACGTGCAACAATCTCACCCTGGTATTGGCGCAGTTGCTGCAGCCGAGACTGAATTCTTTTGTGATATCTGCATCAGATCATTCAAAAGTCGCCAGGCTTACTCTAATCATATGCGTATTCATGCTAAAGTACCGACTACTAATAGAAAACCAGGTGACGTTAAAAGCGGATTTACACCTCAAATTATAGGTAAACCTATCAAGCAATATCCTATGGTTCAACCTGGTTTTGTCTCATTTAAACCTAATTACAATATTCCGAATGCTCCATATTCATGTGACATATGTGGTAAAGGATTTATGCACAAGAAAAATATTTGGAAGCACAAGAAGGTGTTGCATGCTGATATTTTAACGGATAGACATGATAGTGAAGAGAATACTATGCAAGCTTCCACTGAAGAGGAAGAGTTTAACCCTGATGAAAACGGTGCTGTTCTATCAACTCCACAATTTAATAGTTTTAATTTCACAAACTTCCCGAATAGTGTACCACAAACACCACAAGAAACAATGCCTTTCTCATGTGAATTATGCTTCAAACGATTCCCGCTTAGGACTAGTTTATGGAAACACAAACGCGCTAAGCATGGAATTGTTAACCCTAGCTCTAGCGGTAACGAGGCTTCCCAGCCGTCAGCTAGTGGCGAGGGTAGCAGTAGATCCAGTTGCACCATATGTAGAATCACGTTTTCAGATAAGAAATCATACTATCGCCACCGAAAGAATGTCCATAAATCAACTGTTCAAATGTGTAAAATATGTGGTAAACCTTTAAGTTCCACCTTAGAGTTATACGAGCATTTGAAAGCAGCTCACGCAAGGGAACTGCTAGGCTATAACGCCAACCAAGGCTCCAGTAAATCTCAAGATATGTCACAGGAGATAGAACCCGATTATGAAAATGATCAGGAGGCTGTCGATCCCAGCGTCGATTATCAAGCGCGTTACCCTTGTGACACTTGTGGTAAACAATTTGTTGGTTTGCTAGCATTACAAAACCACCAATGCATTAATCAGCTACCGTCACAACCACAGACATTCGACTGTGAGATTTGTCACAAGAGTTACACTTCAATATCTGCGTTAAAAAGTCATCGCGGCTGGCATTTGCGTTCGCCTGACGGCAAAGCAGCAGCCAACAATTCCGGGCTGTGGATGCCACAACACAAAGTTACTAGCAAGATAAGCAAACATGAAGTGATCGACCCGTCGCAACTTGCTAAGGTCACACATACACCTGCTCCCGCCGCCCCTGCGGCCGCCGTCGTAGCGAAAAGAAGACTACCACCAGAGGTTGAAGTGACAGTTGTTAATCCAAATAAGAAATTGAGGTCTGACGATTCAGTCGAATTAGATGCACAAAATGCTGGTTCAGTTGAAGATAGGTACTGTACAATTTGCGACAAAGAATTTACAAAACGGGCCGCATATCAGCGCCATATGGACGAGGTGCATCAACCGAATTCAGTGTTTTGTCCGGTCTGTGATAAGAGTTTCACTAGGAAGTCTACATTGCTTATTCACATGAAGAAACACTACGAAAGTGGTGAGGGCAGTTCATCTGCTACAGGTCAAGGGGATGATGATATGTTCTCTTGCGATTTGTGTGGTGCTCAGTATGATAACGACCAAGCGCTGCGGGCGCACCGAGCAAGGCACCACGGAGAAGATGAGTCGGGAGAAGAGAGCGACGATGGGAATGTTCCTATTGCTCAACCAGGAGAATTCACATGTGCGCAGTGTGGCGATGGCGTCGCAACACCCAGAGACCTCATAGCCCACCGCACAATGCACGCCACTCCCACCAAATTCTTCTGTAATATATGCAAAGTGTACTTTGCGCGGGCGCTGGATCTCTCGTCGCACACTCGAGCGCGACACGCTGACAACGAAAAAGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAACGGCACATCGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSLDDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHIFKNVCKRTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGLSNKLQPEGPPILASLGLTPRSDKGGEESENNEEDEEEMNEPEPPQTFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLTHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNVSTKVVPVNKVITPQKPIPIKSSKTTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDTDAYDPQQGDEEADEEIQNNQSQNYEAVDMESDNEIEIARQQGIDEHEGEEYADGEENVDQCDDENNMEGGQSDIEKDGHDDTVESQDQEDDSVDIKAEGEAKDEEGQDEREHEEENDMNHNENADEDDDDLPMTLAPVVEINEGLQVNSFNEGDEELDETVDPDETIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLACVHCRSRFKDKSLLKKHIRKGECTVYIACDLCTEKFSNMQDFNDHALGVHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMSSVEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDVKSGFTPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILTDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNSVPQTPQETMPFSCELCFKRFPLRTSLWKHKRAKHGIVNPSSSGNEASQPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQEIEPDYENDQEAVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPAPAAPAAAVVAKRRLPPEVEVTVVNPNKKLRSDDSVELDAQNAGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDMFSCDLCGAQYDNDQALRAHRARHHGEDESGEESDDGNVPIAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00852035;
90% Identity: iTF_00852035;
80% Identity: -