Clig027364.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Craniophora ligustri
Gene Symbol
Hr39
Assembly
GCA_905163465.1
Location
LR990957.1:13815556-13832610[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.065 9.6e+02 -0.4 4.4 73 193 218 344 137 373 0.56
2 3 2.8e-08 0.00042 20.6 0.1 1 21 446 466 446 479 0.91
3 3 9.2e-65 1.4e-60 206.6 0.0 151 408 498 764 471 764 0.84

Sequence Information

Coding Sequence
ATGGTGATGAGCACCGCGATGAGCAGTGAGGGCGATGCGGTGAAGGTGGAGGGGGGACACGTGTCTGTCACCACTATCAGCATGTCGGGGCCGGAGACAAGCAACGGTCAGTTCTCGTACAGTTCGAGCGGCGTACGCATCAGTGTGTCTTCAGAGCCCCATGATGAAGACAGCACTGACGCCGAAATCTCCAAGATCGACTTCAACCAACATCAATATGAGGTGAATATGCGTAACAAGAAGAAGCGTTCATCTGGTGGCGCGCACTGCGATCTAGCCAACAACGAGCGTGAGCGACCCATGTCTTGGGAGGGAGAGCTCTCCGACTCAGAGATGGTCATAGACACCAGTGTTAATAACGATGACAATAGCAGTTCTCTAGACCTCCAATCGTCCAGAGATTCGATCGACACCCTTCGAAATGTGAGCATCAAGACAGAGCCTCTCAAGAACGAGGGGTTCCAGAGCGTGGATGAGCAGCGTGTGCTTGATCTCAAGTACAGCGCGCCGCTACAGCCACACCAGAGGAGTCATAGCATGAATAGGATATCGGTACTAACAGACGGTCAGACATCATTGTCTCTCGCGAGGCGGCCGTCCTCACCGACCAGTAGTGCCAAATCCCTAGCACTCAGCGACCAGGGTTCCGCCCCTATGACTCACGCAGGCCTCGACCAGGTCCAGAACTTGACCATTAAGAAAGAGACGCAACTTTCTGAGTTGAAATGCGAGCAGTCGGTGGGCATGGAGAAGCTGATAGGCGCGCTGCACGGCTCGCCGCTGCTGGGCCGCCTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCCGTGCACTCCATGTACACGCACAGTGTATACAGCAGTCCGTCGGCGAGTCCTCGCGCCTCGCGGCACTACACGCCGTCCTTGTCTCGCAACAACAGCGACGCCTCGCACTCGTCCTGTTACTCGTACAGCTCCGAGTTCTCGCCCACGCACTCGCCTGTACAGGGTCGTCACCCACAGGTGATGTACCGTGAAGCAGCCGCGGTGTATGACGGCACACATGATGACGAGCCTGACGTGCCTGAAGACAGGCTCCATCATCACCAGGGCATCAGCAGACAACAGCTTATCAACAGTCCTTGTCCTATTTGTGGCGACAAGATCAGCGGGTTCCACTACGGCATATTCTCCTGCGAGTCATGCAAAGGTTTCTTCAAGCGGACGGTGCAGAACCGCAAGAACTACATGTGTCTGAGGGGCGGCAACTGTCCTGTCACTGTCACCACGAGGAAGAAATGTCCTGCGTGTCGATTCGACAAGTGCTTGGGATGCGGGATGAAGTTAGAAGCTATAAGAGAGGACAGGACGCGAGGCGGGCGCTCCACGTACCAGTGCTCGTACACGCTGTCGGGCGCCGCGTCCACGGGCTCGCTGCTGTCCGCGCACGCGCCCACCACGCTGCGCCACGCCTCCAGCCTCACCTGTGTAAATGGCCCAGGGTCGTACAGCAGCCGAGGGGAATCCAGTAACAGTCAAGTGACACCAGACATACCAGCATTATTACAGGAAATAATGGATGTGGAGCATCTCTGGCAGTACAACGAGTCCGAGTTGAGTAGGCTGGGCAAGTCGACCGGCAGCCCTTCTGCCAACCCCCTGCTGGCTGCCAGCGGCATCACAGCGCACAACTCCAGCCCCGACTTCCTGGCCGACCTGTGCAACATCGCCGACCATCGACTCTACAAGATCGTCAAATGGTGCAAGAGTCTACCGCTCTTTAAAAATATTTCGATCGACGATCAGATCTGTCTGCTGATCAACAGCTGGTGCGAGTTGTTGGTGCTGTCGTGTTGCTACCGCGGCGTCAGCACGCCCGGCGAGGTGCGCGTCGGCGGAGGCCGCGGCATCACGCTGCACCAGAGTGCTAAGTTGGGTCTGACGCCTTGTATAGAGCGCATGTTGAGCTTCACGGACCACTTGAGGAGACTACGAGTGGACCGATACGAGTACGTCGCGCTCAAAGTCATCGTACTGCTCACTTCAGATGCGCCTGATTTGCGCGAAGTGGAGAAAGTACGAGCTTCTCAAGAGAAGGCGTTAGCGGCTCTGCAAGCCTATATTTCCACGCACTCGCCCGGCACGCCTGCCAAGTTTGGAGAACTGCTCCTCCGTATACCTGAACTGCAGAGGACTTGTCAGTTCTTCATGCAAGTCGGTAAAGAAATGCTGAACCCAGCGAACAAAAGCAAAGACGGCGACGGACCAAGCTTCAACCTGCTCATGGAACTGTTACGCGGCGACCACTGA
Protein Sequence
MVMSTAMSSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFNQHQYEVNMRNKKKRSSGGAHCDLANNERERPMSWEGELSDSEMVIDTSVNNDDNSSSLDLQSSRDSIDTLRNVSIKTEPLKNEGFQSVDEQRVLDLKYSAPLQPHQRSHSMNRISVLTDGQTSLSLARRPSSPTSSAKSLALSDQGSAPMTHAGLDQVQNLTIKKETQLSELKCEQSVGMEKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPQVMYREAAAVYDGTHDDEPDVPEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYSSRGESSNSQVTPDIPALLQEIMDVEHLWQYNESELSRLGKSTGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYISTHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00042698;
90% Identity
iTF_00806824;
80% Identity
iTF_00383806;