Clig017249.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- dl
- Assembly
- GCA_905163465.1
- Location
- LR990962.1:15162744-15171364[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-47 1.6e-43 149.3 0.1 14 125 11 125 3 131 0.92
Sequence Information
- Coding Sequence
- ATGAGAGCACCGCCCCGCGGTCTGGCGGTATTTCGTTATGAGTGCGAGGGTCGGTCAGCGGGTTCGATTCCCGGCGTGAACAGCACTTCGGAAAACAAGACGTACCCTACTATTAAGATACATGGCTACACCGGGCACCTCGTCATTGTTGTGTCATGTGTCACCAAAGATGAGCCTTACAGGGCACACCCTCACAACCTAGTAGGTCGTGAGAGATGCGAGCGGGGGGTGTGCACGATCCCGCTCCGCATCACGGAGGAGACCAGCGAGTACCAGTTCAAGAACCTCGGCATCCAGTGCGTCAAGCGGCGCGACATCGCTGAAGCACTCACCGTCAGGGAAAAACTACGAGTTGACCCGTTTAGAAGTAAGTGGAAGTCACTGTCGTACAAATCCTAG
- Protein Sequence
- MRAPPRGLAVFRYECEGRSAGSIPGVNSTSENKTYPTIKIHGYTGHLVIVVSCVTKDEPYRAHPHNLVGRERCERGVCTIPLRITEETSEYQFKNLGIQCVKRRDIAEALTVREKLRVDPFRSKWKSLSYKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01533705;
- 90% Identity
- iTF_01533705; iTF_01029921; iTF_01424815; iTF_00771643; iTF_00851487; iTF_00711580; iTF_00038458; iTF_01028028;
- 80% Identity
- -