Clat048827.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- MAZ
- Assembly
- GCA_949710035.1
- Location
- OX453319.1:3445328-3474179[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.47 79 5.8 0.0 3 23 129 149 127 149 0.95 2 13 0.00037 0.062 15.5 5.0 1 23 251 273 251 273 0.99 3 13 1.2e-05 0.002 20.3 0.2 1 23 279 302 279 302 0.97 4 13 0.17 28 7.2 5.8 1 23 307 330 307 330 0.93 5 13 1.9e-06 0.00032 22.7 0.5 2 23 471 492 470 492 0.97 6 13 0.00013 0.021 17.0 2.8 1 23 498 520 498 520 0.98 7 13 1.5 2.5e+02 4.2 4.7 1 23 641 663 641 663 0.95 8 13 0.00059 0.099 14.9 2.5 1 23 669 691 669 691 0.97 9 13 0.022 3.7 9.9 5.3 1 23 700 722 700 722 0.98 10 13 0.00015 0.025 16.8 0.6 2 23 769 790 769 790 0.97 11 13 0.047 7.9 8.9 7.8 1 23 807 829 807 829 0.96 12 13 1.4e-06 0.00023 23.2 0.7 1 23 835 857 835 857 0.98 13 13 5.9e-06 0.001 21.2 4.3 1 23 863 886 863 886 0.98
Sequence Information
- Coding Sequence
- ATGAGTGCAATGCCTTCAGACATGGATCCGTTGAGCTACGAATTCCCTCAATACGAGGGTTATAACGGTCCGCCTGCACTATTACCAAACTGcaatttcaacttaaaaccCGATCAAAGAACGGTTAATACAGAGTTCTACAACATATTCAATGCGTTACAGTTGGAAATGCAAAACCAGCAAGACAAAGcgttatcaataacaaacttatCTAACAAAAAAATTCAACCAAACACCTCAAACAAACCCATACAAAATGAAGATTCCAAACCGctactaaaattaaaacaagaaaaacaggAGAAACAGAAGAAGCGACTAAAAGGCAGAACAAGTAAATACTGGTCAGAGAAGATCAAAGATGATAATTTTAAGTTCTACGGTTGTGCGGTGTGCAATATCAGTTTTACAGCCCTCCCTGACTTAGATCAGCATGTAACGGTTCACAAAGACCGACTAACAAGCtatgatttaaaaattaaaaacttattaaagagaaaaaaaatgaaaaaggagaagaaaaaaaagaaaaaggttgataaaattaaaaatgaagacaTTGATGTTGAAATAAAACCGGAGGACGGTTACATTGGTAACGAGAAAACGTCTGAGTTTTTAAATCAGAATAATGAAAATCAACCAGCGTTCGAAGAGCAGATAGATATTAAGAATGAGGTCCAAAGCAATGATAACGGTGACAATGTGTCGGATACTGAAACGCAGTCGTTGGTGAATCTTCAGAAGATTTACAAATGTTTTGGGTGCCACAAACAGTTCACTTTAAGTTATTATCTTAAGCTACATGTTCGGTCTCATACagATGAGAAACCTTACACTTGTCCGGTGTGTGGCCAGTCGTTTATTACCGCAAGCAAACTCGGGAGGCACAACAAGAGAATACACTTGGCCATCAGGCACCAGTGTCGGATATGCTATAGGTACTTCACTAAATTTGAAAACCTTACCACACACTTTGACAAGAAACATCCTGAAGACAAACTTGAAGGAGAACCTTAtgactaCAACGCCATTCTACCATACttaaaagagttggaagaagAACTAAGAGATAAGGCCGAAAAAGCGGAGAAAGAGAAAGCGAGTGCAGATCCCTGGAACACTTGGGGAGTTACCGATGGAGACTTAGTGCCTAAGGAGGAATCCAAAGAACTACCGGAGCCTGTGCCAGAATCCGTCCTGATAGAAGATGTCAAGTTAGACCCACCTGACGTGGAAATCAAAGAGGAACCGGACGACCCCCCAGATAACCAGGACGCTTTGAAGTCTGAAGACGGAGACAGTGTTAAAGACGAAAGGTACTCTGATGACGATTACTTCCCCTCAAACACTTGGGCGGTGTCCCCCAAACAAGAGGACCCCCCGTCCCCCAAAGTTAAGGGCCCCTTACAGTGCAGTGTGTGCGAAAAGACTTTGAGCACGGCCTCATACTTGAGGATCCACATGAGGACACATACCGGTGAAAAACCGTTCAAGTGCTATATTTGTGACCGCGGTTTTATAACTTCAAGTAAAATGCATCGACATGTGCTGACGCATGAAGAAAGCTGGAAAGGTGATGAAGCGCCGTTGAAATTGGGAGAGATCAAGGCAGACCCTGATGAAGATGATGGTGGTGGTGATAAGAAAGTAAAGAAGACCAAgAAATTGATGAAGAAAGTCAAAGGGAAGTTAAACAAGAAAGCAAAAGGCGAGAAAGTCAAGAAGTATACGTACAAGAGTCGCCCGCATGCGTGCGAATTCTGCGGGAAGAAGTTCCTGCATTTGGAGACTATGCAGGTCCACAAAAAGTGCCACGAAGGCGAAGAGTTAGTCCACAAATGTTCGTTCTGCCTCGAAGTCCAACCCGATGCTGAACGTCTCAAAGAACACGAGGCATCGCACAGCGGGCCGAGGCCTTATCTCTGCACTATTTGTATGAAGACATACAAGAAGAAGGAGACTATGGTATATCATCGGAAACACCATGAACCCGATAAAGAGTTCCAATGCAACGTATGCTCCAAGACCTTTAACGCTGCATGCAAGctacaacgccatctagtgagccaCAGAACGGACAAGTTTGTGCTCAGATACGAGTGTCCGGTCTGTGCTCACATGTTCCATACGAAGTATCATGTGCAGATGCATCTGACTACGCACCAGAAGGAGGGATTAATCGTTGAAGAGAACCGTAACCAAATTCTTGCGATGGTATTACAAAACGCAAGAAAAATACCAAAAAATTCTAATGGCCCGACTACAGCCCCTGACTTGGTACAAACCGACGAACGATCTAGAGTCTGCAATATATGCGGCGAAGTCTTCCAACATTTCTACTACTTAGAAGAGCATTTGAAGAGTCACGGATCAAAAATTGCCATCGAAGACTTGAACAAGACCGAGGAGAAGAAACACCAATGTCAAGTATGTAAGAAAAGTTTTAAATTACATTACTATTTGAAGTTACACAGCTTTACACATACAAAGGAAAAGCCATACATTTGTCAGCAATGTGGCAAAGGTTTTATAACTAAAGGCAAGTTGAAAAGGCATCTAGAGACTCATACGGGTTTGAAAAAGTACCAATGTCATATTTGTTACAAATTTTTCACTCGAACAAGTTATTTAAGAATACATGTTAGGACTATACATGGAACGCAAGATTATAATTTTAGCTTGCAAAAAGGTCGACAAAAAGGAGATACCCCACCGCAAACCCAAAGACTACCCCTGCAAACCAAGAAAAAGGTCATGTTGTCGATCCTGCAAGTCACCTACCCTAATCGAACTCAGCAAAGCAGCAACAGGCAGCTGCTGCCACTGCTGCTGCCTCCTCTTTCAGCACCTAAAGGAAATGAGCAAATTGCTGACCTGGGTAGTATGCCACAACGCGCCTAA
- Protein Sequence
- MSAMPSDMDPLSYEFPQYEGYNGPPALLPNCNFNLKPDQRTVNTEFYNIFNALQLEMQNQQDKALSITNLSNKKIQPNTSNKPIQNEDSKPLLKLKQEKQEKQKKRLKGRTSKYWSEKIKDDNFKFYGCAVCNISFTALPDLDQHVTVHKDRLTSYDLKIKNLLKRKKMKKEKKKKKKVDKIKNEDIDVEIKPEDGYIGNEKTSEFLNQNNENQPAFEEQIDIKNEVQSNDNGDNVSDTETQSLVNLQKIYKCFGCHKQFTLSYYLKLHVRSHTDEKPYTCPVCGQSFITASKLGRHNKRIHLAIRHQCRICYRYFTKFENLTTHFDKKHPEDKLEGEPYDYNAILPYLKELEEELRDKAEKAEKEKASADPWNTWGVTDGDLVPKEESKELPEPVPESVLIEDVKLDPPDVEIKEEPDDPPDNQDALKSEDGDSVKDERYSDDDYFPSNTWAVSPKQEDPPSPKVKGPLQCSVCEKTLSTASYLRIHMRTHTGEKPFKCYICDRGFITSSKMHRHVLTHEESWKGDEAPLKLGEIKADPDEDDGGGDKKVKKTKKLMKKVKGKLNKKAKGEKVKKYTYKSRPHACEFCGKKFLHLETMQVHKKCHEGEELVHKCSFCLEVQPDAERLKEHEASHSGPRPYLCTICMKTYKKKETMVYHRKHHEPDKEFQCNVCSKTFNAACKLQRHLVSHRTDKFVLRYECPVCAHMFHTKYHVQMHLTTHQKEGLIVEENRNQILAMVLQNARKIPKNSNGPTTAPDLVQTDERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDLNKTEEKKHQCQVCKKSFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRTSYLRIHVRTIHGTQDYNFSLQKGRQKGDTPPQTQRLPLQTKKKVMLSILQVTYPNRTQQSSNRQLLPLLLPPLSAPKGNEQIADLGSMPQRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00284780;
- 90% Identity
- -
- 80% Identity
- -