Clat046174.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- Lztr1
- Assembly
- GCA_949710035.1
- Location
- OX453317.1:10700598-10715031[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-16 1.7e-13 52.5 0.0 4 109 18 154 15 155 0.84 2 4 3.5 2.2e+03 0.6 0.1 77 108 154 185 152 187 0.87 3 4 4.4e-17 2.7e-14 55.0 0.0 9 96 253 340 249 355 0.82 4 4 0.53 3.3e+02 3.3 0.0 72 105 350 383 343 387 0.80
Sequence Information
- Coding Sequence
- ATGTTACTGTCAAACTACCCCCGCTGCACTCTGCACGATGACTTCGGGCGCATCCTCAAGTCGCAGCAGTTCTGTGACGTCACACTGGTCGTGGGCCCCGACGAGATATCCTTCTTGGCGCACCAGGCTTTGCTCGCTGCCCGCTCCAAGTACCTGTTCGAGAAAATACTAGAAGCACGGGAAGAACTAGCCAAGCGTATAGCAGCAGGAGAAGAAGACGCCAAAGAGACGTACTCGTACATGGCCAAGCCAAAGCTCACCGTCAAACTGCCTGAGGCCACGCCAGAAGCTTTCAGTATGGTGCTCAACTATATCTACACGGATAGGATAGACCCCACAAAGAAAGATGAAGACCCAGCGGCTCCGGCGTCCATGCTTCTAGTGATGGAAGTACTGCGACTAGCGTTTCGCCTTCACATTCCTCGATTAAGAGGTTTATGCGCAAGATACCTGCGCGCCAATTTGTGCCTTGACAATATACTTGCTGCGCTTCATGCCGCGCATCACGCCGACTTGAAATGTATCAAGGAGTATTGTTTGAAGTTCGTGGTGAAAGACTACAACTTCACTCCGATAGTGATGTCCAAGGCGTTCGAGAACGTGGAACAGGTGTTGATGGTGGAGCTGATTCGGCGGAGGCAGACGCCGCCCAACAAgctgccgcccgcgcccgcgcacgAATGTGACGAACAGATTATTGGTACAACGTTAGAACAAGATATGGCGGTATTCGCGGGGGGCGGGTCCGGTGGGCTGGAATTAGCTGACGTCACGTTGAGAGTGGGCGACTCGCTAAGGCCCGCCCACCGGTCTATACTCGCCGCTCGCGCCGCCTACTTTGAGGCCATGTTCAGATCCTTCGCACCGGCTAACAACAGTGTCAATATTCAGATCTGCGACACGATACCGTCGGAAGAGGCGTTCGATTCGATGCTCCGGTATATCTACTACGGGGACACCAACATGCCGACCGAAGACTCGCTGTATCTGTTCCAAGCACCTATATACTATGGTTTCACGAACAACCGACTGCAAGTTTTCTGCAAATACAACCTGCAGTCAAACGTGTCTCCGGAGAATGTGCTCGCTATACTGCAAGCGGCCGACCGCATGAGGACCTCTGATATCAAGGAGTATGCGCTGAAAATGATCGTCCATCGCTTCGGCGTGGTCGCCCGCCAAGAAGCGATCAAGAACATAGCTCAACCTCTTCTAGTAGACATACTACTAGCGCTCGCCGAAGAGCCGCACTTCGATCCCAACAAGCAAAAACAGCAGAAACTGTCCACTTCTGCCTCCGCTGATGCTGTTTCCGAAGACCCAGAGACCAAACACAAGTCCGGCAAATCACATCAGTAA
- Protein Sequence
- MLLSNYPRCTLHDDFGRILKSQQFCDVTLVVGPDEISFLAHQALLAARSKYLFEKILEAREELAKRIAAGEEDAKETYSYMAKPKLTVKLPEATPEAFSMVLNYIYTDRIDPTKKDEDPAAPASMLLVMEVLRLAFRLHIPRLRGLCARYLRANLCLDNILAALHAAHHADLKCIKEYCLKFVVKDYNFTPIVMSKAFENVEQVLMVELIRRRQTPPNKLPPAPAHECDEQIIGTTLEQDMAVFAGGGSGGLELADVTLRVGDSLRPAHRSILAARAAYFEAMFRSFAPANNSVNIQICDTIPSEEAFDSMLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKYNLQSNVSPENVLAILQAADRMRTSDIKEYALKMIVHRFGVVARQEAIKNIAQPLLVDILLALAEEPHFDPNKQKQQKLSTSASADAVSEDPETKHKSGKSHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00034920;
- 90% Identity
- -
- 80% Identity
- -