Basic Information

Gene Symbol
Cadm1
Assembly
GCA_949710035.1
Location
OX453304.1:4242357-4307870[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.064 8.3e+02 1.8 0.0 7 21 3 17 2 19 0.94
2 8 0.062 8e+02 1.8 0.0 7 21 66 80 64 82 0.94
3 8 0.062 8e+02 1.8 0.0 7 21 129 143 127 145 0.94
4 8 0.062 8e+02 1.8 0.0 7 21 165 179 163 181 0.94
5 8 0.062 8e+02 1.8 0.0 7 21 228 242 226 244 0.94
6 8 0.062 8e+02 1.8 0.0 7 21 291 305 289 307 0.94
7 8 0.062 8e+02 1.8 0.0 7 21 354 368 352 370 0.94
8 8 0.062 8e+02 1.8 0.0 7 21 390 404 388 406 0.94

Sequence Information

Coding Sequence
ATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATTCTACTTGATGTCATAGGTGAGTTTTCTCTCACTTGTAATGATCAGCTCACAACGTGTATTGCCGGATGGGGCAAGTGGCATATATTTCAGCCATCAGCACTGCGGATACAAGACGTTGTGGCCACCGACCGGGCGATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATCCTACTTGATGTCATAGGTGAGTTTTCTCTCACTTGTAATGATCAGCTCACAACGTGTATTGCCGGATGGGGCAAGTGGCATAAATTTCTGCCATTAGCACTGCGGATACAAGACGTTGTGGCCACCGACCGGGCGATGTATCGCTGCCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATCCTACTCGATGTCATAGCACTGCGGATACAAGAAGTTGTGGCCACCGACCGGGCGATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATTCTACTTGATGTCATAGGTGAGTTTTCTCTCACTTGTAATGATCAGCTCACAACGTGTATTGCCGGATGGGGCAAGTGGCATATATTTCAGCCATCAGCACTGCGGATACAAGACGTTGTGGCCACCGACCGGGCGATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATTCTACTTGATGTCATAGGTGAGTTTTCTCTCACTTGTAATGATCAGCTCACAACGTGTATTGCCGGATGGGGCAAGTGGCATATATTTCAGCCATCAGCACTGCGGATACAAGACGTTGTGGCCACCGACCGGGCGATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATCCTACTTGATGTCATAGGTGAGTTTTCTCTCACTTGTAATGATCAGCTCACAACGTGTATTGCCGGATGGGGCAAGTGGCATAAATTTCTGCCATTAGCACTGCGGATACAAGACGTTGTGGCCACCGACCGGGCGATGTATCGCTGCCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATCCTACTCGATGTCATAGCACTGCGGATACAAGAAGTTGTGGCCACCGACCGGGCGATGTATCGCTGTCGAGTGGACTTCAAGATATCACCGACGAGGAACCACAAGATCCTACTTGATGTCATAGAATTACCAGAAAAGCCGAAGATATTCGACGACGATAAAGAAGTAATAGGAGTAGCTGGGCCCTACATCGAAGATAGCAGTTTGAAGCTTACCTGTGTTGTAAGTGGAGGTAACCCTCTACCAAGACTACGATGGTGGCGCGACGACAAAGTGATCGCCACCCTGATGCCCATAGACGATGGCTCGGGACTCAGTTCACTAGAACTCAGAGTACCCAAGCTGACCAGAGAGTACTTCGAAGCGGTGTACACGTGCACAGCGGACAATACACTCCTAGTGCCTCCTTTGAGGGTCAACGTGCAAATACAACtttattTACGACCTCTGCTAGTGGAGATACTCGCTAGAGAGCAACCGTTGTCAGTTGGACAACAAGCTGAGCTGGCCTGCAGGGCAATCGGCTCCAGACCTCCAGCCGTCATCTCATGGTGGTTGGATGACAAGCCACTCATCGCTCATTCACAAAAGAACTCAGACGACAGAAACGAGACGATATCTTTTCTCCGGTGGACGCCCCAAATGGAGCATGATGGTCGAATGCTGACCTGCAAAGCCAATCATATCAAACTAGAACATTCTACATTGGAGACCACCATGTCACTTAACTTGCACTATGTGCCAATAGTGGTCCTTGAACTGGGCTCCAAGCTGAATCCGAACGACATAGAAGAAGGAGATGACGTGTACTTTGAATGCGTGGTGCGTGCCAACCCGCCCGCCTACAAAGTAGTTTGGGAGCATAACGGTCAAATAATGACGCATAATCAGCGCGCTGGAGTCATCGCTGGGTCAGCGCATCTAGCCCTGCAAGGGGTATCGAGGGAGCAGGCAGGAAGATACGTCTGCACTGCTTCCAATGTGGAAGGCGACGGAAAGTCGCAGCCGGTCAACCTGCAGGTTATATACAAACCGGTATGTTCGACTGCCATAACGGCGGTAGTGGGGGCTGCCTTCAACGAACCGGCAAAAGTGACGTGCGAAGTCGACGCATTTCCAACGCCCAAGAATTTCCAGTGGACGCTGAATAATTCCATGGGAACTATGGAGTTAGAACCGGGCAAGTTCACAGTGGACAGTGGCGGTCGCTCCATACTAACCTACACCCCCACAACGGAAGCAGACTACGGGACGCTGTCCTGCCGGGCTACCAACCTAGCGGGGCAGCAGATAGAGCCGTGCCGGTACAGTCTGCTGCCGGCAGTCAGGCCTGACCCGCCGTTCAACTGCTCAACTGTCAACCTGACAGATGACTCGGCCGAGCTAAGATGTGTTCCTGGATACGACGGGGGCCTGCTGACCATATACTTCGTAGAAGCTTGGGAAGCAGGAACTCTCATTGCCAACGCGTCCACGCCAACCCCAGTGTGGAAACTCCGAGGTCTTGGGTCCGGGAAGGCGTTGAAACTCGTTTTCTACGCACACAACGCCAGAGGGCGTTCCGAGTCCACCACGCTCAGAGTACATACCCTGTCAAGACTGGCGTTGCATACAGAAGCAAAGACAACAAGCAATGGAGCCGTGGACGCGAGTTGGATGCTCGGCATCATAGCGGGTACCATTGGCACCTTAGCAGCTGTGGTGCTCATAGCTTTGCTGGCTAGGCGGAGGCATCATAGACCTATGCAGTATGAAGCCCCGATGCAAACCGTGAAAGGATACAAAACTTCGCTGCATAACAACAGCCATTCACCTATTCAGCCAGACGACAAGAACCCTGACGTAGTACCGCTTGGCAAAGATTACAATTGCTCGCGTGACATCGAGCGGCCTCCTGAGCCGCCGCCCTACGGTGCCGTCGTCTCTCCTCCCGTGGGTGCTTCCAGGAGTGTCCACAGTCTACACCAGCACGAAGCCCGGTCTACCACGCCGCATACACCTAATACTCCGGCTTCGGATGCACAGAGCATCGGTACGCTCGCTGACGACCGTCGCAGCGTCACGAGCGGCACTCTGTCGAGGCGGAGAGAGGTCGTCACCACGAGGACGCCACTTCTAGCCAATGCGAGGGAAAGCtgcgtttag
Protein Sequence
MYRCRVDFKISPTRNHKILLDVIGEFSLTCNDQLTTCIAGWGKWHIFQPSALRIQDVVATDRAMYRCRVDFKISPTRNHKILLDVIGEFSLTCNDQLTTCIAGWGKWHKFLPLALRIQDVVATDRAMYRCRVDFKISPTRNHKILLDVIALRIQEVVATDRAMYRCRVDFKISPTRNHKILLDVIGEFSLTCNDQLTTCIAGWGKWHIFQPSALRIQDVVATDRAMYRCRVDFKISPTRNHKILLDVIGEFSLTCNDQLTTCIAGWGKWHIFQPSALRIQDVVATDRAMYRCRVDFKISPTRNHKILLDVIGEFSLTCNDQLTTCIAGWGKWHKFLPLALRIQDVVATDRAMYRCRVDFKISPTRNHKILLDVIALRIQEVVATDRAMYRCRVDFKISPTRNHKILLDVIELPEKPKIFDDDKEVIGVAGPYIEDSSLKLTCVVSGGNPLPRLRWWRDDKVIATLMPIDDGSGLSSLELRVPKLTREYFEAVYTCTADNTLLVPPLRVNVQIQLYLRPLLVEILAREQPLSVGQQAELACRAIGSRPPAVISWWLDDKPLIAHSQKNSDDRNETISFLRWTPQMEHDGRMLTCKANHIKLEHSTLETTMSLNLHYVPIVVLELGSKLNPNDIEEGDDVYFECVVRANPPAYKVVWEHNGQIMTHNQRAGVIAGSAHLALQGVSREQAGRYVCTASNVEGDGKSQPVNLQVIYKPVCSTAITAVVGAAFNEPAKVTCEVDAFPTPKNFQWTLNNSMGTMELEPGKFTVDSGGRSILTYTPTTEADYGTLSCRATNLAGQQIEPCRYSLLPAVRPDPPFNCSTVNLTDDSAELRCVPGYDGGLLTIYFVEAWEAGTLIANASTPTPVWKLRGLGSGKALKLVFYAHNARGRSESTTLRVHTLSRLALHTEAKTTSNGAVDASWMLGIIAGTIGTLAAVVLIALLARRRHHRPMQYEAPMQTVKGYKTSLHNNSHSPIQPDDKNPDVVPLGKDYNCSRDIERPPEPPPYGAVVSPPVGASRSVHSLHQHEARSTTPHTPNTPASDAQSIGTLADDRRSVTSGTLSRRREVVTTRTPLLANARESCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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