Clat025641.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- dl
- Assembly
- GCA_949710035.1
- Location
- OX453306.1:30343881-30368871[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-29 3.6e-25 90.7 0.1 2 64 81 143 80 145 0.96 2 2 2.8e-10 4.5e-06 28.5 0.1 33 64 145 176 143 176 0.93
Sequence Information
- Coding Sequence
- ATGTTGTATTCAATATCAACGCCAGATGTAGGTGTGGATGAAAATGCGCACGTAATCCACAATGTCGGAGAACAGGGCGCCAACTTGAGTGATGTTGTGGAGCTGATCCTCTCCGAGGAACCGACGCTCGGGTCGGGTCTGCCCGCGGGCGCGCCCGGCTCGGCGCTGCAAGCGGCGCCCGAGCCTGCCGCGGCGCTCCAACCGCCGCCCGGCGCCATGCAGGCGTCCCCGCCCTACGTCTACATAGTCGAGCAGCCCTCGCCCAAGTCACTCAGGTTCCGCTATGAGTGCGAGGGGCGATCGGCGGGCTCGATCCCCGGGGTGAACAGCACGCCCGACAACAAAACCTTCCCCACCATCAAGGTGTGCGGCTACAAGGGCTGCATGGTCATCGTCGTCTCCTGCGTCACCAAGGACGAGCCGTACAACACGCCCGACAACAAGACCTTCCCCACCATCAAGGTGTGCGGTTACAAGGGCTGCATGGTTATCGTCGTCTCCTGCGTCACCAAGGACGAGCCGTACAAGTAA
- Protein Sequence
- MLYSISTPDVGVDENAHVIHNVGEQGANLSDVVELILSEEPTLGSGLPAGAPGSALQAAPEPAAALQPPPGAMQASPPYVYIVEQPSPKSLRFRYECEGRSAGSIPGVNSTPDNKTFPTIKVCGYKGCMVIVVSCVTKDEPYNTPDNKTFPTIKVCGYKGCMVIVVSCVTKDEPYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -