Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:1017-5132[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00024 0.024 15.1 3.8 2 23 223 244 222 244 0.96

2 18 0.00012 0.012 16.0 1.0 2 23 251 272 250 272 0.97

3 18 0.0012 0.12 12.9 1.6 2 23 286 307 285 307 0.97

4 18 0.00043 0.043 14.3 5.4 1 23 313 335 313 335 0.98

5 18 4.8e-06 0.00048 20.4 1.9 1 23 341 363 341 363 0.99

6 18 0.42 42 4.9 1.1 5 23 437 456 435 456 0.92

7 18 0.0058 0.58 10.7 4.1 1 23 513 535 513 535 0.99

8 18 0.00017 0.017 15.6 1.3 1 23 541 563 541 563 0.99

9 18 0.00052 0.052 14.0 2.6 1 23 569 591 569 591 0.99

10 18 6.5e-06 0.00065 20.0 1.0 1 23 597 620 597 620 0.98

11 18 0.0054 0.54 10.8 3.3 1 23 626 648 626 648 0.98

12 18 0.016 1.6 9.3 0.1 2 23 655 676 654 676 0.96

13 18 0.00057 0.057 13.9 5.2 1 23 682 704 682 704 0.98

14 18 0.0005 0.05 14.1 0.4 1 23 710 732 710 732 0.98

15 18 0.00059 0.059 13.8 2.7 1 23 738 760 738 760 0.97

16 18 0.00078 0.078 13.5 1.2 1 23 766 788 766 788 0.98

17 18 2.8e-05 0.0028 18.0 0.8 1 23 793 815 793 815 0.98

18 18 1.2 1.2e+02 3.4 0.2 1 12 821 832 821 833 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00024	0.024	15.1	3.8	2	23	223	244	222	244	0.96
2	18	0.00012	0.012	16.0	1.0	2	23	251	272	250	272	0.97
3	18	0.0012	0.12	12.9	1.6	2	23	286	307	285	307	0.97
4	18	0.00043	0.043	14.3	5.4	1	23	313	335	313	335	0.98
5	18	4.8e-06	0.00048	20.4	1.9	1	23	341	363	341	363	0.99
6	18	0.42	42	4.9	1.1	5	23	437	456	435	456	0.92
7	18	0.0058	0.58	10.7	4.1	1	23	513	535	513	535	0.99
8	18	0.00017	0.017	15.6	1.3	1	23	541	563	541	563	0.99
9	18	0.00052	0.052	14.0	2.6	1	23	569	591	569	591	0.99
10	18	6.5e-06	0.00065	20.0	1.0	1	23	597	620	597	620	0.98
11	18	0.0054	0.54	10.8	3.3	1	23	626	648	626	648	0.98
12	18	0.016	1.6	9.3	0.1	2	23	655	676	654	676	0.96
13	18	0.00057	0.057	13.9	5.2	1	23	682	704	682	704	0.98
14	18	0.0005	0.05	14.1	0.4	1	23	710	732	710	732	0.98
15	18	0.00059	0.059	13.8	2.7	1	23	738	760	738	760	0.97
16	18	0.00078	0.078	13.5	1.2	1	23	766	788	766	788	0.98
17	18	2.8e-05	0.0028	18.0	0.8	1	23	793	815	793	815	0.98
18	18	1.2	1.2e+02	3.4	0.2	1	12	821	832	821	833	0.87

Sequence Information

Coding Sequence: ATGAATACTGCCAATAATTTTGCATTCGAAAAATCAGCTGATGAAAATAATACTCAGGGCTGCGAAATTAACGATGAAATGGAAAATGATTTAACATACCATTATTCAAATTTAACACAAATTGATTCGAATGCTCCTAGTAATCTACTTAAGAAAGAAGATGAAAATTCTTCTGTAGATCCATTGGATCCTTTAGAAGTGGGAAATGATTATCATTATGAAGATGCAATGAACGTAGACCCTTTTTTTGATATAAAAGAAGCATACGATTCAAATTTATCGGCTAACAATTGCGTCAATATTGATGAAAGTTTATTTGTGATTAAAAACTTAAATGAAGATTCAGATGAATTTTATAATACACCTTCGGGCATTAATTCACTTAGCTTGAAAGAAGATCGTTGGTCAAATAAATATAAAAAGAGAACCATGAAACAAGTGTGTAGTTTAAAAAACAAAATTAACTGTCCGAAAAAAAGTAACAAGCTTAAGCAAGTATCCATAGTCAAGGATTGGGAGATTATTTTAAAAAAATACAATCCTGTTGTACTACTTGAAAGAATCACGATTCCGGGACAAGCTTTGAGTTCATTAACTGCAGCAGCTAATCATAATAAAATTACCATTAGAAAAAGGTCAAATAGAAAATGTAAAAAATCTTCTCTCAACTGCAAACATTGCGAAGCGACTTTTACTTCGAAGGCCTGTTTAAATTCACATGTACGAATTCACGTGGAGAACAAGCGATCTACATGTCAAATTTGCTCTGTTAAGTTCGATCGTAGAAGTGATTTTGACCGTCACCTGCGAATTCATGCGCGTGAAAAGGAAGATTACGCTAAAGATGAGAAACTTAAATGTGAATTTTGTTTCGCAGAATTTTCTAATAGAAATCTGTTTCAAAATCACATGCAAAATCACATGGGTGGAAGAGTATTCAAGTGTCACGAATGCTCAGCAAAATTTCATCAGAAAAAAGAGTTGACTGATCATTTGAAAATTCATACAGAAAATAGTTCATATGAATGTAAGAGTTGTTCAATGACATTTGATCAAAAAAAGCAGCTACAAATTCATATGCAGACTCATTTAAAAAAATTAAAAGTCGAACCTGGAATTGATTCCGTCTTACTCGATGAACAGAATCATTTGATAAATCATGTAGATATTACAGAAAATATACTCGAGTATGAAACTCTTATTGAATTTAATCAAGAAAGTAATTTTATCAATTGTGATCCCTTGGAAATTCCTACTGAAAATGAACAGTTGTTTATGCACGCAGATACGAATGAATTTAAATCTACAATTTGTTTAAAAACGTTTGATAAGAAAAATCAGTTGGATGATCATCATATGCTATTTCATACCGAAAAAGAAACATTACAATGTGAGGAAATTCTTTCAGTCGTATCAAATCAAAAAGAACATTTGAATGATAATATGGATAATCGAGCCGGTTCTGAAACTCCTTTGGAATTTAATCAAGAAAATGATTCAGTTGATCCTTTGGAAATGAATGATGAGAAAGAAGAATTTAAATGTGAGACTTGTTCAGAATTATTTCATCAAAAAGAACACTTGGATGATCACGCAAGAACCCACGTGGAAAAAAATCAATTTAAATGCGACAACTGCTCAGCAAAATTCAATGAAAAAAATGATTTGGACAAGCATATGCAATCGCATGCAAATGATAAAACATACAAATGTTACGTTTGCTTAGCGAAATTTACTCAGAAAAGTCATATTGACAGTCATATGCGTATTCACGCTGACAAAAAAATGTTCAAATGTGACATTTGTCAATTAGGGTTCAAACGCAAAAGTACTTTAGATGATCACCTTCGAAAAGTTCACGAAGGAGAACTGCCATTCAAATGCGATCTTTGTTCAGCGAAATTCAATAAAATACACAGTTTGAATGTGCACAAACGGAACCATTTTGAGGAAAATGTTTTGACATGTAATATTTGTGCGATGAAAGTAAAATCCATAGCTTCTCTCAGTCAACACATGCTGATTCATACAGATTCAAAGCCTTTTTCCTGCAATATCTGTCACATGAAATTCAAAAACAGAAAAGATGTAAAAACTCATAAGCTTACTCACCGAGAATTGAAGCCATTTAAGTGCGACAAGTGTCCAGCGAAGTTTGAATATGTAGGCACTTTGAATAAACATAGAGAGATTCACACGGGAAAATTAATTTTTGAATGCGATATGTGTCTGGAAAAATTCAAACGCGAAAATCATTTGCGCACGCATAAGCTTATTCATTCAATAAATCAATCATTTCAATGTGATATATGTTCGGCTAAGTTTTCTTTAATGAAACATTTAGAAGCTCATAAACAAATTCATATTCTGAGACCGTTCGTGTGTGACTTTTGCCCAGCAACCTACGCCAGGGAATCAACTTTTAAGATGCACATGCGACGTCATACTAATATAAGATCATTTGAATGTGATATTTGTGACGAAGACTATAATCATCCA
Protein Sequence: MNTANNFAFEKSADENNTQGCEINDEMENDLTYHYSNLTQIDSNAPSNLLKKEDENSSVDPLDPLEVGNDYHYEDAMNVDPFFDIKEAYDSNLSANNCVNIDESLFVIKNLNEDSDEFYNTPSGINSLSLKEDRWSNKYKKRTMKQVCSLKNKINCPKKSNKLKQVSIVKDWEIILKKYNPVVLLERITIPGQALSSLTAAANHNKITIRKRSNRKCKKSSLNCKHCEATFTSKACLNSHVRIHVENKRSTCQICSVKFDRRSDFDRHLRIHAREKEDYAKDEKLKCEFCFAEFSNRNLFQNHMQNHMGGRVFKCHECSAKFHQKKELTDHLKIHTENSSYECKSCSMTFDQKKQLQIHMQTHLKKLKVEPGIDSVLLDEQNHLINHVDITENILEYETLIEFNQESNFINCDPLEIPTENEQLFMHADTNEFKSTICLKTFDKKNQLDDHHMLFHTEKETLQCEEILSVVSNQKEHLNDNMDNRAGSETPLEFNQENDSVDPLEMNDEKEEFKCETCSELFHQKEHLDDHARTHVEKNQFKCDNCSAKFNEKNDLDKHMQSHANDKTYKCYVCLAKFTQKSHIDSHMRIHADKKMFKCDICQLGFKRKSTLDDHLRKVHEGELPFKCDLCSAKFNKIHSLNVHKRNHFEENVLTCNICAMKVKSIASLSQHMLIHTDSKPFSCNICHMKFKNRKDVKTHKLTHRELKPFKCDKCPAKFEYVGTLNKHREIHTGKLIFECDMCLEKFKRENHLRTHKLIHSINQSFQCDICSAKFSLMKHLEAHKQIHILRPFVCDFCPATYARESTFKMHMRRHTNIRSFECDICDEDYNHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00378215; iTF_00379818; iTF_00380547; iTF_00379083; iTF_00381303;
90% Identity: iTF_00378215;
80% Identity: -