Cses005023.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- scaffold:14370-18433[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.5e-108 9.8e-104 346.8 37.5 3 300 34 330 31 330 0.95 2 3 0.0062 1.1e+02 1.9 2.7 122 171 330 379 329 383 0.89 3 3 0.024 4.2e+02 -0.0 5.9 193 238 360 404 348 405 0.60
Sequence Information
- Coding Sequence
- ATGAATACAATGGAGTCAGCAATAACTGGTCGAAGGCGTGCTGCTAGTCGGCATTCTGCTGAGGATCAAGCTCTCGATCAAATAGCAAAAGAGGCTGGAGAAAGATTAGCAGCACGAAGACAAGCCAGGGCCGAAGCGCGAGAAATCCGAATGAGAGAATTAGAAAAACAGCAAAAAGAAGCTGAACAAACCGCTGATCGTGTTTACGATATGTGTAATGCTGACGGAACAAGAACTTTGAGGGTAACACCAGATCCTATAAGGGCTTCACGCTTATTAACAAATTCAAATAATTTTCAGTCAAGTCGTAGGTCTTCCGAAGATTCCTTAGAGGATACTGGTCAAAGTAGAGATTTAAGATTAGAGCTTAAAGAGCTTGAAGAAAAATTTAGAAAAGCAATGATTGCTAATGCTCAACTGGATAATGAAAAATCGTCTTACGTTTATCAAGTGGATTTACTTAAAGATCAATTAGAAGAATCGGAAGAATCGGCCGCTACATTGCGACGAGAGCTCAGGGAAAAAACTAGTGAGGCTAAATTATTGCAACGTGATTGCCAACGGTTGAAAGAGGATTTTGAAATGTGTAAAACATTATTGGAGGAACGAGATAGGCTTATAGAAGAAAATGGATTGGTAATTATTGAAGATGAGGTCAGTGATGACGAAGAAGCAGAAACAACTAATGGATTTGTGAATCGTAAAAAAAAAGTACTAGTCAGTACAGAAGCTGCTGAATTGTTACAAAATGCTGGTGAAGGATCTCTAGATGTTCGGTTGAAAAAGTTTGGAGCAGAGAAAAAAGAATTACAAGATGAAATCCGACATCTAAGACTAGAATTGGAAGAAGCCAAGAGTCGATTAAGATCTGAAAGATCGTCTGGATCAGTATTAGAATTATTAGACTCAGAAGACGTCCAAAGGGAAGCAAATAAATTATTGGCAGATTACAAATTCAAGTTACAAAAAGCCGAACAAGATATGTCGACGTTACAAGCAACTGTTGCGAGATTAGAGAGTCAAGTTATTCGTTACAAGTCAGCGGCCGAAACTTCTGAGAAAGCCGAAGACGACTTGAAGGTTGAGAAGCGGAAATTACAGAGAGAAGTAAGAGAATCGCAGAGTCGTGTTGAAGAGTTAGAAACAACAAATTCGCATTTACAAAGACGATTAGATAAATTGATAAAAGCAAAATCGGCTCTTTTGAAAGAGCTCTGA
- Protein Sequence
- MNTMESAITGRRRAASRHSAEDQALDQIAKEAGERLAARRQARAEAREIRMRELEKQQKEAEQTADRVYDMCNADGTRTLRVTPDPIRASRLLTNSNNFQSSRRSSEDSLEDTGQSRDLRLELKELEEKFRKAMIANAQLDNEKSSYVYQVDLLKDQLEESEESAATLRRELREKTSEAKLLQRDCQRLKEDFEMCKTLLEERDRLIEENGLVIIEDEVSDDEEAETTNGFVNRKKKVLVSTEAAELLQNAGEGSLDVRLKKFGAEKKELQDEIRHLRLELEEAKSRLRSERSSGSVLELLDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAETSEKAEDDLKVEKRKLQREVRESQSRVEELETTNSHLQRRLDKLIKAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01003522;
- 80% Identity
- -