Cses015002.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia sesamiae
Gene Symbol
tfip11
Assembly
None
Location
scaffold:15271-18309[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-89 1.5e-85 287.1 8.7 1 275 377 644 377 644 0.97
2 2 0.019 1.7e+02 1.6 0.0 157 190 656 688 649 702 0.53

Sequence Information

Coding Sequence
ATGTCTGATGATGAAAATGAATTTCACACCAATCGACCCAGGAGAAAATTCACAAAAGAGCAACAAATGCTTGGAATGTGGGCAGATGACAGCGAAGAAGAGGAAGCCCCATCAAGAGTTCCTCCAAGAGGATTTAATAAAGGACCTAAAAATTACACAGCCCCGGTTAATTTCGTAGCTGGAGGGATCCAGCAAGCAGGAAAGTCCAAAGATAAAGACAAAAAAAAGGAGAAAGATAAGAATGATGACGAAGATGAGGAGGACCAGGATGTGTCAAACACGTCCAGTGATTCCGAAAAAGAACAAGTACCCTCGAGGCCATCATTTTCTATTAATGCCGACGCAGTAGGTGGAATCGCCGGGCTCAGAAAGAAACGTGCTCCAGTTAATCCCTCTTTGATGCGAACTGGAGTTGGAAACTGGGAAGTACACACCAAGGGAATCGGAGCGAAGCTGCTCCTCCAGATGGGTTTCGAGCCCGGCAAAGGTTTAGGAAAATCCCTTCAAGGTATAAGTGCTCCCGTGGAAGCTCAAGTGAGGCGCGGACGTGGTGCGATTGGTGCTTACGGTCCTGAGAAGCTCGCCAAGGTCCCGCAGGAAAAAAAAGACGAAGATGTTGAGAAGACCAAGGAGTTTAAAGCCAAGCTGTCGCAGTGGCGCAAGACTGATGGAGTCGCGAAGAAGAAGACCAAGTACTCGTACAAAAGCGTCGATCAAGTTCTTGAGGATGGCAAGCTCAGGCCGAATGTCAAGACTTCCACCAGCGACATAAGTCGTGTCAAAGTCATTGACATGACGGGTCCAGAACAGAGGGTACTCAGCGGATATCATGCTATAGCCGGTCAGCACCGGCCTGACGATTCAGCTGCTGAATTTGACAAAAAATCTCTGACTAACTTCGCACTTCCAGAACTCCAGCATAATTTAAATTTGATCGTCGACATGTGTGAGCAAGATATAATCCAAAATGAAAGAAAAACTCGGCATCTCGGTGACAGAGTGGTGGCTCTCGAAGCCGAGCAGAAGAACATGGATAAAGTTATCGAGCAACATGACCAGCTGATCAATACTCTTGACACCGTAGTTAAAATGATTGACAATCTTATGGTCAATAACAAAGACATGAGTCTTGATGAGACTGCTGAAGCTTTTAGAAGACTACAAGACCAGTATTACAACGACTATAAGACGTACGAGCTTGGTGAACTGGCCAGCAGTCTCGTCACTCCGAAACTAGCAAGCTCGATGGCGAGGTGGAATCCTCTGGCGGAACCAATGCATCACCTCGACTCGGTGAGGCAGTGGAAAGACATCCTGAGCATCGGAAACAACCTGATAGAAGCCAGAACATCAACCACGCCGTACGATCAGCTGATTTGGAACGCCTGGATGCCTCCAGTTCGCAGATCTATTGAGCAGTGGGCTTGTCGACAGCCGGACCCGTTGATTGAGCTCTTTGAGAACTGGATGCCCTTCATCCCCAAGTTCATCATGGACGGCCTGGCGATGACAGTCCTGCAGAAACTTACTGCTGAGGTGACTGAGTGGGATCCAAGGACTGACACAGTTCCCATTCACATGTGGATCCACCCGTGGCTGCCTTTGTTGGGAGATAATATGAATACAGAGATTTACCCGACAATCAGACGGAAACTCGGCTCTGCGCTGGGAAGCTGGCATCCGTCAGACAGAACCGCGAGACTAATGTTGGAGCCTTGGTCCCAAGTCTTTCCCAAAGGTGACATGGAGGCTTTCCTTATTAAGAATATCCTACCAAAACTGGAAATTACAATGTCCGAGTTTATTATAAATCCTCTCTCTCAGCATCTGGACAACTGGAACTCGGTCTACGACTGGGTGGGCTTGCTGCCAGTTCATACGATGGCTGGACTGCTAAACAAGTGTTTCTTTCCCAAATGGCTTCATGTTCTAGCAGCTTGGCTGAATCATTCGCCTAATTACGACCAGATCACCCAGTGGTATCTCGGCTGGAAGAAGATGCTCAATGACAAGCTTCTGGCCGAGCCTGTCATCAAAGATAACTTCAAGAAAGCCCTGGATATGATGAATCGTGCTGTTTCCAATACTCAGGGGCTTCAGCCAGGCTCTGCTGAGTATGTTTCGTATTTAATGAGTCTTGAAAGGACCCAGCCAGCTCCTCAGATTCCGGCTTCAGCTCAACCCCGAATTGATAGACTCGCAGAAGCTGTACGGACTGCCTCGCAAATACCTCAAGGCTTCAAGGATCTTGTGCAGAAAAGATGCGCTGAACGAGACATTGTCTTTATGCCTTTGCCGAATCGATATCGCGAGGCTAAGCAAGTGTATAAAGTTGGAAACGTCCAGGCTTACATTGACGGTAATGTCCTTTTTGTTAACCAGAAGGCGTCTAATTGGGTACCAACTTCGCTCAACGCCTTGTTAGACATGGCCGAGCTGTAA
Protein Sequence
MSDDENEFHTNRPRRKFTKEQQMLGMWADDSEEEEAPSRVPPRGFNKGPKNYTAPVNFVAGGIQQAGKSKDKDKKKEKDKNDDEDEEDQDVSNTSSDSEKEQVPSRPSFSINADAVGGIAGLRKKRAPVNPSLMRTGVGNWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAQVRRGRGAIGAYGPEKLAKVPQEKKDEDVEKTKEFKAKLSQWRKTDGVAKKKTKYSYKSVDQVLEDGKLRPNVKTSTSDISRVKVIDMTGPEQRVLSGYHAIAGQHRPDDSAAEFDKKSLTNFALPELQHNLNLIVDMCEQDIIQNERKTRHLGDRVVALEAEQKNMDKVIEQHDQLINTLDTVVKMIDNLMVNNKDMSLDETAEAFRRLQDQYYNDYKTYELGELASSLVTPKLASSMARWNPLAEPMHHLDSVRQWKDILSIGNNLIEARTSTTPYDQLIWNAWMPPVRRSIEQWACRQPDPLIELFENWMPFIPKFIMDGLAMTVLQKLTAEVTEWDPRTDTVPIHMWIHPWLPLLGDNMNTEIYPTIRRKLGSALGSWHPSDRTARLMLEPWSQVFPKGDMEAFLIKNILPKLEITMSEFIINPLSQHLDNWNSVYDWVGLLPVHTMAGLLNKCFFPKWLHVLAAWLNHSPNYDQITQWYLGWKKMLNDKLLAEPVIKDNFKKALDMMNRAVSNTQGLQPGSAEYVSYLMSLERTQPAPQIPASAQPRIDRLAEAVRTASQIPQGFKDLVQKRCAERDIVFMPLPNRYREAKQVYKVGNVQAYIDGNVLFVNQKASNWVPTSLNALLDMAEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01006060;
90% Identity
iTF_00379613;
80% Identity
-