Cses011970.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- lola
- Assembly
- None
- Location
- scaffold:9077-24023[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5 9e+03 -3.5 0.1 4 21 102 119 101 121 0.75 2 2 8.2e-09 8.6e-06 25.4 0.1 9 40 408 440 405 445 0.87
Sequence Information
- Coding Sequence
- ATGGAGGACGATCAGCAGTTCTGCCTTAGGTGGAACAATCACCAAACGACGTTAATTCAAAATTTTGATACATTGCTGGAAAGCGGTACCTTGGTCGACTGCACCTTGGCAGCGGAGGGGAAATATCTTAAGGCCCACAAAGTAGTCCTCTCCGCGTGTAGTCCATACTTTGAGGGTCTTCTTAGTGAGCACTATGACAAACATCCTGTCTTCATCCTCAAAGATGTTAAGTTTAAAGAACTTAAAGCCATGATGGACTACATGTACAGAGGAGAGGTTAACATCTCTCAGGACCAATTGGCAGCTCTTTTAAAAGCCGCCGAGTCGTTACAAATCAAAGGGCTCTCGGAAAGTAAAACCGGCAGCAGTGGTAGTACAAGTAGCAGTAAGGCAGAAACAAGATCACAAAAGACTGTACAACCCTCAGCCCCCTCGTTGGACATTCCTCACTCGTCTTCCGGCCTCACAATTGAGAAAAACAACAAAGTTCCTCGTCAAAGTCTCGCCCAGGCCTCTGTTGGCGATTTACCCGAAGATTCCGCAAGTCCCTCTTTATCAAAAGGCATTTCCTCCAGGGAAGGCTCAGTAAGTCCAAACGGACGAAAACGTAAAAGATACAGGCGAAGAAGTCTAAACGATGACAACCCAATTGACAACCACGAAACCTCAAACTCGAGCGACATGTCTCATCAGCCCATGAACGTGCCTGCTCTTGGTGTTGCCCCGGTAGCCGATGAGAAATCAATGTCTGACCCATCTGACTCTCTTGGCAGATCCGCACTTATGCAACAACTGACTAAACCCGCTGACGATATGCTACCGATGCCTGTTGAAAAACCTGAGCCTAATGACACACTGATTGAGCCAAAGTCTGAGTACCTGGATGAAGCTGAGGACAGTGTTGAAGACTTGACACTTGATGATGAAGGAATGGATGATACTATGGATGACGGAAACAGAGCCGGACCCTCTCACGACCCCTCCCACCCTGGTAGGGGGGGAGCGCGGTCTTGTACGAGAGGTAATTTGGTCGCTGGTGGTGAGACGGACACCACCAGCTGGGCATCTCATTTCCTCGATTGTAAAAAGGTATCGATTGTCAGCAATTGCTATATTAATCAGCGACGAGAATCGCGTCCGGATGTTGACGTGTCCGCGTTGCTCAAGTCACTCGCCAACAAGCAGGGTAGAAAATATAGTTTAGACTGCGTTAAAAAATCCCTGGAGGCAATATTACAGCAAGGTGTTAGTACTACTCAGGCATCTGAAATGTACGGGATTAATCGATCTACTCTGCAATTTTATCTGAAAAAATTAAATGTCGTAAGACGCCGCCTTGGATCGTGGCACGTAACTGGTGACCGAAGTAACGCGGGAGGCGTTGTCGGATCTGTAGTTGCTGGAGCACCTGGTTCTAACGATGAAGTTTTCATGCAGGCCCAGGAAGCTGCACAGGCTCATCGCGACTCTCAAGTTGTACACCGAATATCAGGAGCAGCTTCCTCGGCGGGTCAGCTTCACCCGATGACAGATTATCGCAGACTCGCTTGTCCTAGCTGTGGCAAAAGTTACAAGTATAGAGGCGGTTTAATGAGACACATAGCCGAGATTTCCTCCCTGTGTATGCTTACAGCGAGTCCCGGGACTACGGAGGCCGGCTCCCCAGGGGAACTGCGCTTTCGGTGCGTGATGTGCGGCCGCGGGTACCGCTCGCGGTCCTCCCTCACCAGACACTCGAGGTACGAGTGCGGGGGACTCGGATCCAGGTACACCTTCACCTGTACGCTCTGCGGGAAATACTTCTGCAGACCGGATCATCTCAAGCAGCACATTCTCAACATTCACGGCGGCACTGCTTTCACCAAATAA
- Protein Sequence
- MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGSSGSTSSSKAETRSQKTVQPSAPSLDIPHSSSGLTIEKNNKVPRQSLAQASVGDLPEDSASPSLSKGISSREGSVSPNGRKRKRYRRRSLNDDNPIDNHETSNSSDMSHQPMNVPALGVAPVADEKSMSDPSDSLGRSALMQQLTKPADDMLPMPVEKPEPNDTLIEPKSEYLDEAEDSVEDLTLDDEGMDDTMDDGNRAGPSHDPSHPGRGGARSCTRGNLVAGGETDTTSWASHFLDCKKVSIVSNCYINQRRESRPDVDVSALLKSLANKQGRKYSLDCVKKSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRLGSWHVTGDRSNAGGVVGSVVAGAPGSNDEVFMQAQEAAQAHRDSQVVHRISGAASSAGQLHPMTDYRRLACPSCGKSYKYRGGLMRHIAEISSLCMLTASPGTTEAGSPGELRFRCVMCGRGYRSRSSLTRHSRYECGGLGSRYTFTCTLCGKYFCRPDHLKQHILNIHGGTAFTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006285;
- 90% Identity
- iTF_00382155; iTF_00381966; iTF_00379910; iTF_00379728; iTF_00379543;
- 80% Identity
- iTF_00382155; iTF_00381966;