Basic Information

Insect: Cotesia flavipes
Gene Symbol: lola_1
Assembly: None
Location: scaffold:24127-39051[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8.6 8.8e+03 -3.5 0.1 4 21 102 119 101 121 0.75

2 2 6.7e-09 6.9e-06 25.6 0.0 9 41 408 441 405 443 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8.6	8.8e+03	-3.5	0.1	4	21	102	119	101	121	0.75
2	2	6.7e-09	6.9e-06	25.6	0.0	9	41	408	441	405	443	0.88

Sequence Information

Coding Sequence: ATGGAGGACGATCAGCAGTTCTGCCTTAGGTGGAACAATCACCAAACGACGTTAATTCAAAATTTTGATACATTGCTGGAAAGCGGTACCTTGGTCGACTGCACCTTGGCAGCGGAGGGGAAATACCTTAAGGCCCACAAAGTAGTCCTCTCCGCGTGTAGTCCATACTTTGAGGGTCTTCTTAGTGAGCACTACGACAAACATCCTGTCTTCATCCTCAAAGATGTTAAGTTTAAAGAACTTAAAGCCATGATGGACTACATGTACAGAGGAGAGGTTAACATCTCTCAGGACCAATTGGCAGCTCTTCTAAAAGCCGCCGAGTCGTTACAAATCAAAGGGCTCTCGGAAAGTAAAACCGGCAGCAGTGGTAGTACAAGTAGCAGTAAGGCAGAAACAAGATCACAAAAGACTGTACAACCCTCAGCCCCCTCGTTGGACATTCCTCACTCGTCTTCCGGCCTCACAATTGAGAAAAACAACAAAGTTCCTCGTCAAAGTCTCGCCCAGGCCTCTGTTGGCGATTTACCCGAAGATTCCGCAAGTCCCTCTTTATCAAAAGGCATTTCCTCCAGGGAAGGCTCAGTAAGTCCAAACGGACGAAAACGTAAAAGATACAGGCGAAGAAGTCTAAACGATGACAACCCAATTGACAACCACGAAACCTCAAACTCGAGCGACATGTCTCATCAGCCCATGAATGTGCCTGCTCTTGGTGTTGCCCCGGTAGCCGATGAGAAATCAATGTCTGACCCATCTGACTCTCTTGGCAGATCCGCACTTATGCAACAACTGACTAAACCCGCTGACGATATGCTACCGATGCCTGTTGAAAAACCTGAGCCTAATGACACACTGATTGAGCCAAAGTCTGAGTACCTGGATGAAGCTGAGGACAGTGTTGAAGACTTGACACTTGATGATGAAGGAATGGATGATACTATGGATGACGGAAACAGAGCCGGACCCTCTCACGACCCCTCCCACCCTGGTAGGGGGGGAGCGCGGTCTTGTACGAGAGGTAATTTGGTCGCTGGTGGTGAGACGGACACCACCAGCTGGACATCTCATTTCCTCGATTGTAAAAAGGTATCGATTGTCAGCAATTGCTATATTAATCAGCGACGAGAATCGCGTCCGGATGTTGACGTGTCCGCGTTGCTCAAGTCACTCGCCAACAAGCAGGGTAGAAAATATAGTTTAGACTGCGTTAAAAAATCCCTGGAGGCAATATTACAGCAAGGTGTTAGTACTACTCAGGCATCTGAAATGTACGGGATTAATCGATCTACTCTGCAATTTTATTTGAAAAAATTAAATGTCACGCCGTTGGAGACAACCCGCCTCTGCTTTAGCCTTGGATCGTGGCACGTAACTGGTGATCGAAGTAACGCGGGAGGCGTTGTCGGATCTGTAGTTGCTGGAGCACCTGGTTCTAACGATGAAGTTTTCATGCAGGCCCAGGAAGCTGCACAGGCTCATCGCGACTCTCAAGTTGTACACCGAATATCAGGAGCAGCTTCCTCGGCGGGTCAGCTTCACCCGATGACAGATTATCGCAGACTCGCTTGTCCTAGCTGTGGCAAAAGTTACAAGTATAGAGGCGGGTTAATGAGACACATAGCCGAGATTTCCTCCCTGTGTATGCTTACAGCGAGTCCCGGGACTACGGAGGCCGGCTCCCCAGGGGAACTGCGCTTTCGGTGCGTGATGTGCGGCCGCGGGTACCGCTCGCGGTCCTCCCTCACCAGACACTCGAGGTACGAGTGCGGGGGACTCGGATCCAGGTACACCTTCACCTGTACGCTCTGCGGGAAATACTTTTGCAGACCGGATCATCTCAAGCAGCACATTCTCAACATTCACGGCGGCACTGCTTTCACCAAATAA
Protein Sequence: MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGSSGSTSSSKAETRSQKTVQPSAPSLDIPHSSSGLTIEKNNKVPRQSLAQASVGDLPEDSASPSLSKGISSREGSVSPNGRKRKRYRRRSLNDDNPIDNHETSNSSDMSHQPMNVPALGVAPVADEKSMSDPSDSLGRSALMQQLTKPADDMLPMPVEKPEPNDTLIEPKSEYLDEAEDSVEDLTLDDEGMDDTMDDGNRAGPSHDPSHPGRGGARSCTRGNLVAGGETDTTSWTSHFLDCKKVSIVSNCYINQRRESRPDVDVSALLKSLANKQGRKYSLDCVKKSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVTPLETTRLCFSLGSWHVTGDRSNAGGVVGSVVAGAPGSNDEVFMQAQEAAQAHRDSQVVHRISGAASSAGQLHPMTDYRRLACPSCGKSYKYRGGLMRHIAEISSLCMLTASPGTTEAGSPGELRFRCVMCGRGYRSRSSLTRHSRYECGGLGSRYTFTCTLCGKYFCRPDHLKQHILNIHGGTAFTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01006285;
90% Identity: iTF_00381762;
80% Identity: iTF_00379910;