Cses001989.1
Basic Information
- Insect
- Cotesia sesamiae
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:16423-21407[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00041 0.43 10.3 0.0 24 39 323 339 312 343 0.79 2 3 3.5e-12 3.7e-09 36.1 0.1 2 39 355 392 354 395 0.94 3 3 2.7e-17 2.9e-14 52.5 0.0 2 42 410 451 409 452 0.96
Sequence Information
- Coding Sequence
- CTGCACGAAAATGACACCCCGAGATCAGAGTATAGTAAAATAGTCAGAGAGGGAGATTTCGGGGAGGAAATTGAGAGAGACGGTGGTCGATACGGCCCTGGTGTCGCGACAGCCGCGTCGAGCCTCTCTACACCCGGAACCCAACACTTTACTCTCCATTCTTCGTATCCTGAGGGCTCTTTGCTGAAAACGGCGGATCAATTGAAAATAAAAGGGCTGTGCGAAGTGCCAGAGAGTAAGGAAGCGCCAGCGACAGTGAGTTTGAGCTCGTCACCGCGAGAACCAGGAGGTGCGTCGAGGTTCAATTACACGAAGCTGAAGAGGCATCACCCGAAGTACAAGCGCCAGCGAACGAGTCTAGGAGCCGGAGGAGGATCTGCTGGAGATTCCGCTGCTGGGAGGCCCACGAGCACCGACAGGTACAAAGAGGAGGAGAACGAGAACAGCAGCAAGGCCGGATTCGGCTGCGAAAACGACAAAGAGAATCACCGGGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGGAGACGCAGCAGTAATCCTGGAATCCTGCCAGCGAGACACCAACAACGGTAACGGCACAAACAACAATAACGGCTTAGGACACTACGGGCACCATCCGGACCCAGGCGAGGTCGACTTGCCTCCGGAGACCCAGCCCACGCCGCCGAGCGCCACGCTCGTTGGCACCACCATCACACATCTCAGGGACACCGACAATCATTCTACAGATATACAAAATTGTGATAACGTAAAAATAAAATTCGAAACCCTTCACACGATGGACTCATCGGACACCATAGACATAGACAGCCACATGTCGGATTGCGCGAGTGTGAGCTCAAAGCACGCAGCCGAGGGTGACAATATGATGATGATAACGCCCGAACTGCTGGGCCTGATGCCCTCGGGCAGTTCAGTCCACTCCAACTCGGGGGAGAACAATTCTAGGAGTCACTCCGGGGCAACATTCGGAATTCCCTCGACAACTCTCTGGCAGCGCGCTCACAGATTAGGGATCGACACTCCAAAGAAAGACGGGCCGACCAAGTCCTGGAGCGACGAGAGTCTCAATAGCGCCCTGGAGGCGCTAAGGACGGGAACAATTTCGGCGAACAAAGCGTCGAAGGCTTTTGGAATTCCCTCGAGCACTCTCTATAAAATAGCCAGGCGGGAAGGGATAAGATTGGCTGCGCCATTCAACGCCAGTCCCACCACCTGGTCGCCCGCGGACCTGGACAGGGCTCTGGAAGCTATCAGATTGGGACACATGAGTATTAACCAAGCAGCGATTCACTATAATCTGCCATACTCATCTCTATACGGGCGATTCAAGCGCGGAAAATACGAAGAGCCAGTTGTGACGGAGCTTTCTCAGGACGGGACGAACCCTCACTTCCACCAGAGCCCGCACCACAACCACTCTTCCTCGCTCCCGGATCAGTTGCCCTACCAGGGCAGCTGA
- Protein Sequence
- LHENDTPRSEYSKIVREGDFGEEIERDGGRYGPGVATAASSLSTPGTQHFTLHSSYPEGSLLKTADQLKIKGLCEVPESKEAPATVSLSSSPREPGGASRFNYTKLKRHHPKYKRQRTSLGAGGGSAGDSAAGRPTSTDRYKEEENENSSKAGFGCENDKENHRGDWQTEDEECGGDAAVILESCQRDTNNGNGTNNNNGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDNHSTDIQNCDNVKIKFETLHTMDSSDTIDIDSHMSDCASVSSKHAAEGDNMMMITPELLGLMPSGSSVHSNSGENNSRSHSGATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVTELSQDGTNPHFHQSPHHNHSSSLPDQLPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377912;
- 90% Identity
- iTF_00377912;
- 80% Identity
- -