Basic Information

Insect: Cotesia rubecula
Gene Symbol: -
Assembly: None
Location: scaffold:170-13794[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00058 0.06 14.2 1.4 1 23 275 298 275 298 0.96

2 23 3.9 4e+02 2.1 1.5 1 19 304 322 304 326 0.74

3 23 0.024 2.5 9.1 2.9 1 23 332 355 332 355 0.98

4 23 5.6 5.8e+02 1.6 0.4 2 23 362 386 361 386 0.78

5 23 4.9 5.1e+02 1.8 4.2 1 23 435 457 435 457 0.95

6 23 0.00025 0.026 15.3 4.1 1 23 715 737 715 737 0.98

7 23 0.4 42 5.2 7.3 1 23 779 802 779 802 0.98

8 23 0.0011 0.11 13.3 1.6 1 23 808 830 808 830 0.98

9 23 0.076 7.9 7.5 1.3 1 23 836 858 836 858 0.98

10 23 0.024 2.4 9.1 2.2 1 23 863 886 863 886 0.92

11 23 9.2e-05 0.0096 16.7 1.0 1 23 1174 1196 1174 1196 0.96

12 23 0.016 1.7 9.6 8.1 1 23 1203 1225 1203 1225 0.97

13 23 1 1.1e+02 3.9 0.2 1 21 1231 1251 1231 1252 0.86

14 23 0.0001 0.011 16.5 3.2 1 23 1261 1283 1261 1283 0.98

15 23 8.5e-05 0.0088 16.8 0.7 1 23 1289 1311 1289 1311 0.98

16 23 0.0062 0.65 10.9 4.2 1 23 1317 1339 1317 1339 0.98

17 23 5.6e-05 0.0058 17.3 0.9 1 23 1345 1367 1345 1367 0.98

18 23 2.1e-05 0.0022 18.7 0.5 2 23 1373 1394 1373 1394 0.97

19 23 4e-05 0.0042 17.8 2.9 1 23 1400 1422 1400 1422 0.98

20 23 0.00014 0.014 16.1 3.7 1 23 1428 1450 1428 1450 0.99

21 23 0.063 6.5 7.8 7.3 1 23 1456 1478 1456 1478 0.97

22 23 0.018 1.9 9.5 3.0 1 23 1484 1506 1484 1506 0.97

23 23 0.073 7.6 7.5 2.0 1 23 1512 1534 1512 1535 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00058	0.06	14.2	1.4	1	23	275	298	275	298	0.96
2	23	3.9	4e+02	2.1	1.5	1	19	304	322	304	326	0.74
3	23	0.024	2.5	9.1	2.9	1	23	332	355	332	355	0.98
4	23	5.6	5.8e+02	1.6	0.4	2	23	362	386	361	386	0.78
5	23	4.9	5.1e+02	1.8	4.2	1	23	435	457	435	457	0.95
6	23	0.00025	0.026	15.3	4.1	1	23	715	737	715	737	0.98
7	23	0.4	42	5.2	7.3	1	23	779	802	779	802	0.98
8	23	0.0011	0.11	13.3	1.6	1	23	808	830	808	830	0.98
9	23	0.076	7.9	7.5	1.3	1	23	836	858	836	858	0.98
10	23	0.024	2.4	9.1	2.2	1	23	863	886	863	886	0.92
11	23	9.2e-05	0.0096	16.7	1.0	1	23	1174	1196	1174	1196	0.96
12	23	0.016	1.7	9.6	8.1	1	23	1203	1225	1203	1225	0.97
13	23	1	1.1e+02	3.9	0.2	1	21	1231	1251	1231	1252	0.86
14	23	0.0001	0.011	16.5	3.2	1	23	1261	1283	1261	1283	0.98
15	23	8.5e-05	0.0088	16.8	0.7	1	23	1289	1311	1289	1311	0.98
16	23	0.0062	0.65	10.9	4.2	1	23	1317	1339	1317	1339	0.98
17	23	5.6e-05	0.0058	17.3	0.9	1	23	1345	1367	1345	1367	0.98
18	23	2.1e-05	0.0022	18.7	0.5	2	23	1373	1394	1373	1394	0.97
19	23	4e-05	0.0042	17.8	2.9	1	23	1400	1422	1400	1422	0.98
20	23	0.00014	0.014	16.1	3.7	1	23	1428	1450	1428	1450	0.99
21	23	0.063	6.5	7.8	7.3	1	23	1456	1478	1456	1478	0.97
22	23	0.018	1.9	9.5	3.0	1	23	1484	1506	1484	1506	0.97
23	23	0.073	7.6	7.5	2.0	1	23	1512	1534	1512	1535	0.95

Sequence Information

Coding Sequence: ATGTATCCCAGTGAAATCATCGTGATTAGTGATGATGACGATGAGTCGGTGGTAGAAATGATTCAAAACACATCAGCATCTGATTCAAAATGCAATTCTAGTAAAACAAACACAAGTATTGTAACCCCAGTAATTACTAATGGCTTTAAGAATGTCAAGAATGAATTAAATGAGCTTGTGGATGATGATAGGATTGATAATAATGATGATGAGAATTATAATTTTTTGATGCAAGAGCTGTCAGATCTTATAAATTCATATAAATCCAATTCAGTTAATCAAGATTCTTTGATCATTCCTGAGATAGCTGAAGAAAATGTTGACGAGAGGACTCAGAATAATAATATGGGTAAAGAAAAGCATATACAGATAGTGAGCGTAGAGTCATTAAACCAACGAATAAACCAATGGATGGATACAAGTATGGAAGAAGAATTTGTTCCGCCCGTTGATTATCAAGAAAAAAAAGTATTTGAGGGAGATTTTAATAATGTATCAAACAATCATCAGCATGAATTGTTAGAACTGAATTATGATAATTCAGAGAGTTTATTACAAAGTCCAAATGATCCGTGGATGAAAACTCCGATGAACAAGCTAGAACTTAGAGTTTTAAACAAATATCTTCCTATGGTCCAGTTAACTAAGATTTCTTTATCGAAAAATAGTATTAATTTAAAGAATTTTATCAAAGAACAGTTGCAATGTGATGCTAATGTTAATGGTCCTGATTTAAAACCATTAATTCATCAAAATTTGGTGAATGTAAAACAGGAAGTTGGCTCAGAATTAAATTCAGTAAATGATGTTAATCAAGGATTATTTATCTGCAAGATTTGTATTAAAACATTCAATTCAAGAGATGCATTCGAAAAACATATTAAATATTATCACCCTGGCAATAAAGTTTACAAGTGTGATGATTGTCATTATGCCACTGACATACATTTGTCAATGCAAACTCATCGATGGACACATATCAAGGAACGTCCGTTTCGATGTCGTCTTTGTAATTATGGATCTAAGATACAACAACATCTTAAAATGCATATCCGGAGAATTCATACAAAAGAGCGGCCTTTCGTGTGTCCACACTTACCATGTACGTTTGCCGGAGCATATTCTCAAGATTTAAAAAACCATATAAAAAATAGACATTCCAAGAATGATAAAACTGTTTCGCTAAATAGTCTCAGTAATAACCGATCTCGCTCCCATAGACACTTAGAAAGCGATTCCTCAAGTGTTAATTTGAAAGAAATAAAAACTAAAATTAATTCTATTAATCCTACTGAAAAAATGTACCCATGTACGCATTGCACATTTTCAACATCGTGTACAAATGAATTGAAAGTTCATTTAAGTGAACACGAAACTGAAAGTTCAGAAAGTTTTAAGTGTGATGCTTGTGTCAAGATTTTCTATCAAGAGAAAATGTATTCCGGAGATGTCATACTTGTTAGTGATGAGGATTCCGAGGTAGAAGTTTTAAATAACACATCGTCAGCTAATAAAAATTTAAACACCAATATAACTACAAAGTCGCAGATTATTTTTAATAGCTCCAAAAGCATCAACAAAGAATTATATAAACTTAAGACTAATGATGATGATAAGTTCGTGAGTGATGATGATTATCATAATCGTTTGATGCAAGAATTATCAAATGTTTTGGCTGTAAGTAATTTCAACTTTGACCATCAAAGTTCTTGTCCCAGCACTCCGGACACTGACGTCCCTGAACCGAGTTATAAAAACATTTTTGTCTCTGAGGATAATCAGAGTAATGATTTGAGGGATGGAAATCGTATACAGATATTAAAAGTGGAATCATTAAACGTATGGGAAGGACAATGTACAGACAATCAATCAGAACATTTCTTTCCACCGGTTGATGATGAAAGTAGTGGAAAAAAATTAGAAGAAAAAAGTCAAACAACTAGGCATGAACTGGATATTCTAAATAAATATCTTCCTGTTGTTCAGCTTACAAAAGTTTCGCTGCCTAATAACAATATTCATTCAGAAAATTTTAATAAAAAGCAGTTACAAGTTGACAATACTAATGCAAATAACGTAATTAATGAAAAAGTTGCTGTAGAAATGTTCCACGCTAATAATGATGGTCAAGAAGTTTTTGAATTTGAGTGCAAAACTTGTAAAAAAACATTCCATTCGAACGATTTACTCAGTGAACATATTAAGTACCATATAAAGAGAATTCATACAAAGAAGACGCCCTTCGTGTTTTCAAATCCTCCGTATACTTTCGCTGGAACAACTTCTCGAGATCTAAAAAGACTCTCTAAAAAGGAACGTATCAAAAATAAGTACTATAAATGCACTTTTTGTAATTTTAAGACTGTTACTTTACGTTGTTTTAATAATCATTTACGTCGCTTTCATAATGATAAAGCTCCATACACCTGTACGGAATGTAGTTACAGTAGTACTAATTTAAGAGCGTTGAATGTTCATATAAATCATCACTTTCCCAAAGAAACTTATCGTTGCTCTCAATGTACGTACTCTACTGCATGTAGTAGTGAACTTCTATCTCACATTGAAATTCATAAAAGTAAAGAATATAGATGTAATCTTTGTAGAACGCTATTTTCAAAACAAGAAAGTTTTATTAAGCATAAACTCGACAATCATACAGTATTTCCGTTCAATCAAACAGCTAAGTGTGAATTTTGCGAAGATCAATTTAAAAATAAATATAATAAAAGAATCAAAATGTTCACATTAGTTGATGATATAATGAAATATCCTTGTGATGGAATAGAAAACGTTATTAAAATATCAAATTTCAATAATAATGGAATCAATATGAACTACGATTACACGGAGCATATAAACAGTGCAACAGATAGTCAGTTCCAACCACTATCAAATACCGAACCGACATTAACAGAAAATATTAATTATATCTCAACATCATATGAGCTTTTGGGTTCACAAAATGACGCTTATCTCAACTCATATCAAACTCAACCGGTCCAAAATTTAATATCTATAGAACAAAATGAACAAAATATCATACCTATTGTTCCCGAGTTTTCTTATCCAAATGTAAATCTTATGCCGACTATTCCGATCAACGATTATGCACTGGTTCCTTGTTATTATTTGGTGGTACCTGAAGATGGTCTTGTTGCGCCACCCATTATCCCAGTGAACACTATTCCAGAACAAGTTCCAGTAAGATTTGAAGACCGCAGTAACTTTGTGATGGTAAACGTAGACAATGAGTTGGAAAAAACCAATGGTAATTTTATTTATCTTAATAATGTAGTCGCTCCAAGTACCCAGAATTTGTTAAATCAAGAAAATGAAGTAATTGATACTTGCCAGACTTCTGTCGCTGATTTTCCAAGTTGTGAATTGCCAACAGGCTCAGTAGACAAATCAGTATCTTTAGAATCTTCATTAAATATAGAAGACCAGGAGACACCCGATGCTTCTATTTTTTCTCATCCTGAATCTGAACCTCAATCCCAGGCAACAGAAAAATCCCATCCATGTAAAATTTGTAAAAGAAAATTTAACAGTTTAAATCAATTAGAAATTCACATGGGAATTCACGACGTGGGGGATAAATTATTTAATTGCTCTGTATGCCATGTCAATTTCCATCAATTTCATCTTCTAAAACGACACATGCGGCTTCATAAAAGCACCAAAACATTTACATGTGAAATTTGTTCAACAGAGTTTGAGTGGGCTGAGTTTTTAGAACAGCACAAAAAGCGTTGTAATGATGCTAAAAAGCCATATCATGTGTGCAATGTTTGCCAAATGAAATTCAGCAGTCTTTTGAAACTAAAACAGCATATGCGTACTCATAAGGAGAAACAGACACATGAATGCAGCGTTTGTAAGAAGAAATTCATCTGGCCATCACTACTAAACGTTCATATGCGCATCCACACCGGTGATAAAAGATATGAGTGCGATATTTGCCATGTAAAGTTTACTGCGGCTTGTAACATGAAGAAGCACAAGCTTACGCATACGGGCGAGAAACCCTTTCAGTGTGACATTTGCCAGGCAAAATTTACTCGATCAATTAGTCTCACTCAGCATAAAGCAACCCATACCAGCAGAACTGAAGAGTGTGAAATTTGTAAGTCAAAATTCAGGGGACCCTGGAATCTAAAGCGACACATGCGGATCCATACTGACGAAAAACCTTTCAAGTGCGATGAATGCCAATCTACATTCTCTCAAAAATTCTACTTGTCAAAACACATCCGTCTCCACTACAACAAAAAATCTTACGAGTGTGATTATTGTAAGATGAAATTATCTCAAAAATATTGCTTGATTCGTCACATGAAGATTCACGCCGGTAGTAGCGCGTATAAATGCGATGAGTGCCACAAAAAATTCCATTCCATACGAGGTTTAAGTCATCACAAAAGCATCCATACCGGAGAAGTCCCATTTGAATGTGATGTCTGTAAGAAAAAGTTTTTGAAGTTAAAGCACTTGCTCAAACATGAAAATATTCATAAAACGAAGAAAATGTATCACTGTGATATTTGTAACGCCGGATTTAACCAAGTCGGTCATGTTGCGGTCCACAAAATAAGGCATCATGAATCTCAACCGTCTCAAGATTTTAAATGA
Protein Sequence: MYPSEIIVISDDDDESVVEMIQNTSASDSKCNSSKTNTSIVTPVITNGFKNVKNELNELVDDDRIDNNDDENYNFLMQELSDLINSYKSNSVNQDSLIIPEIAEENVDERTQNNNMGKEKHIQIVSVESLNQRINQWMDTSMEEEFVPPVDYQEKKVFEGDFNNVSNNHQHELLELNYDNSESLLQSPNDPWMKTPMNKLELRVLNKYLPMVQLTKISLSKNSINLKNFIKEQLQCDANVNGPDLKPLIHQNLVNVKQEVGSELNSVNDVNQGLFICKICIKTFNSRDAFEKHIKYYHPGNKVYKCDDCHYATDIHLSMQTHRWTHIKERPFRCRLCNYGSKIQQHLKMHIRRIHTKERPFVCPHLPCTFAGAYSQDLKNHIKNRHSKNDKTVSLNSLSNNRSRSHRHLESDSSSVNLKEIKTKINSINPTEKMYPCTHCTFSTSCTNELKVHLSEHETESSESFKCDACVKIFYQEKMYSGDVILVSDEDSEVEVLNNTSSANKNLNTNITTKSQIIFNSSKSINKELYKLKTNDDDKFVSDDDYHNRLMQELSNVLAVSNFNFDHQSSCPSTPDTDVPEPSYKNIFVSEDNQSNDLRDGNRIQILKVESLNVWEGQCTDNQSEHFFPPVDDESSGKKLEEKSQTTRHELDILNKYLPVVQLTKVSLPNNNIHSENFNKKQLQVDNTNANNVINEKVAVEMFHANNDGQEVFEFECKTCKKTFHSNDLLSEHIKYHIKRIHTKKTPFVFSNPPYTFAGTTSRDLKRLSKKERIKNKYYKCTFCNFKTVTLRCFNNHLRRFHNDKAPYTCTECSYSSTNLRALNVHINHHFPKETYRCSQCTYSTACSSELLSHIEIHKSKEYRCNLCRTLFSKQESFIKHKLDNHTVFPFNQTAKCEFCEDQFKNKYNKRIKMFTLVDDIMKYPCDGIENVIKISNFNNNGINMNYDYTEHINSATDSQFQPLSNTEPTLTENINYISTSYELLGSQNDAYLNSYQTQPVQNLISIEQNEQNIIPIVPEFSYPNVNLMPTIPINDYALVPCYYLVVPEDGLVAPPIIPVNTIPEQVPVRFEDRSNFVMVNVDNELEKTNGNFIYLNNVVAPSTQNLLNQENEVIDTCQTSVADFPSCELPTGSVDKSVSLESSLNIEDQETPDASIFSHPESEPQSQATEKSHPCKICKRKFNSLNQLEIHMGIHDVGDKLFNCSVCHVNFHQFHLLKRHMRLHKSTKTFTCEICSTEFEWAEFLEQHKKRCNDAKKPYHVCNVCQMKFSSLLKLKQHMRTHKEKQTHECSVCKKKFIWPSLLNVHMRIHTGDKRYECDICHVKFTAACNMKKHKLTHTGEKPFQCDICQAKFTRSISLTQHKATHTSRTEECEICKSKFRGPWNLKRHMRIHTDEKPFKCDECQSTFSQKFYLSKHIRLHYNKKSYECDYCKMKLSQKYCLIRHMKIHAGSSAYKCDECHKKFHSIRGLSHHKSIHTGEVPFECDVCKKKFLKLKHLLKHENIHKTKKMYHCDICNAGFNQVGHVAVHKIRHHESQPSQDFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00380556;
90% Identity: iTF_00380556;
80% Identity: -