Basic Information

Insect: Cotesia glomerata
Gene Symbol: -
Assembly: None
Location: Contig42619:21710-32732[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.06 6.5 7.8 3.7 1 21 276 296 276 299 0.95

2 25 3.1 3.4e+02 2.4 2.1 1 20 305 324 305 327 0.83

3 25 0.0063 0.68 10.9 1.2 1 23 333 356 333 356 0.98

4 25 5.7 6.2e+02 1.6 0.4 2 23 363 387 362 387 0.78

5 25 0.00027 0.029 15.2 6.9 1 23 693 715 693 715 0.98

6 25 0.43 47 5.1 7.1 1 23 757 780 757 780 0.98

7 25 0.00041 0.045 14.6 1.6 1 23 786 808 786 808 0.98

8 25 0.63 67 4.6 1.2 2 23 815 836 815 836 0.97

9 25 0.025 2.7 9.0 2.7 1 23 841 864 841 864 0.92

10 25 9.4e-05 0.01 16.6 1.0 1 23 1152 1174 1152 1174 0.96

11 25 0.0069 0.74 10.7 7.7 1 23 1181 1203 1181 1203 0.98

12 25 0.62 67 4.6 0.4 1 21 1209 1229 1209 1230 0.87

13 25 0.0078 0.84 10.6 2.3 1 23 1239 1261 1239 1261 0.98

14 25 2.9e-05 0.0031 18.2 0.2 1 23 1267 1289 1267 1289 0.99

15 25 0.0064 0.69 10.9 4.2 1 23 1295 1317 1295 1317 0.98

16 25 5.7e-05 0.0062 17.3 0.9 1 23 1323 1345 1323 1345 0.98

17 25 2.1e-05 0.0023 18.6 0.5 2 23 1351 1372 1351 1372 0.97

18 25 4.1e-05 0.0044 17.7 2.9 1 23 1378 1400 1378 1400 0.98

19 25 0.00014 0.015 16.1 3.7 1 23 1406 1428 1406 1428 0.99

20 25 0.29 31 5.6 10.1 1 23 1434 1456 1434 1456 0.98

21 25 0.019 2 9.4 3.0 1 23 1462 1484 1462 1484 0.97

22 25 0.075 8.1 7.5 2.0 1 23 1490 1512 1490 1513 0.95

23 25 7.4e-05 0.0079 17.0 4.1 1 23 1521 1543 1521 1543 0.98

24 25 6.6 7.1e+02 1.4 0.3 1 23 1549 1571 1549 1571 0.90

25 25 0.00057 0.061 14.2 1.8 1 23 1577 1600 1577 1600 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.06	6.5	7.8	3.7	1	21	276	296	276	299	0.95
2	25	3.1	3.4e+02	2.4	2.1	1	20	305	324	305	327	0.83
3	25	0.0063	0.68	10.9	1.2	1	23	333	356	333	356	0.98
4	25	5.7	6.2e+02	1.6	0.4	2	23	363	387	362	387	0.78
5	25	0.00027	0.029	15.2	6.9	1	23	693	715	693	715	0.98
6	25	0.43	47	5.1	7.1	1	23	757	780	757	780	0.98
7	25	0.00041	0.045	14.6	1.6	1	23	786	808	786	808	0.98
8	25	0.63	67	4.6	1.2	2	23	815	836	815	836	0.97
9	25	0.025	2.7	9.0	2.7	1	23	841	864	841	864	0.92
10	25	9.4e-05	0.01	16.6	1.0	1	23	1152	1174	1152	1174	0.96
11	25	0.0069	0.74	10.7	7.7	1	23	1181	1203	1181	1203	0.98
12	25	0.62	67	4.6	0.4	1	21	1209	1229	1209	1230	0.87
13	25	0.0078	0.84	10.6	2.3	1	23	1239	1261	1239	1261	0.98
14	25	2.9e-05	0.0031	18.2	0.2	1	23	1267	1289	1267	1289	0.99
15	25	0.0064	0.69	10.9	4.2	1	23	1295	1317	1295	1317	0.98
16	25	5.7e-05	0.0062	17.3	0.9	1	23	1323	1345	1323	1345	0.98
17	25	2.1e-05	0.0023	18.6	0.5	2	23	1351	1372	1351	1372	0.97
18	25	4.1e-05	0.0044	17.7	2.9	1	23	1378	1400	1378	1400	0.98
19	25	0.00014	0.015	16.1	3.7	1	23	1406	1428	1406	1428	0.99
20	25	0.29	31	5.6	10.1	1	23	1434	1456	1434	1456	0.98
21	25	0.019	2	9.4	3.0	1	23	1462	1484	1462	1484	0.97
22	25	0.075	8.1	7.5	2.0	1	23	1490	1512	1490	1513	0.95
23	25	7.4e-05	0.0079	17.0	4.1	1	23	1521	1543	1521	1543	0.98
24	25	6.6	7.1e+02	1.4	0.3	1	23	1549	1571	1549	1571	0.90
25	25	0.00057	0.061	14.2	1.8	1	23	1577	1600	1577	1600	0.97

Sequence Information

Coding Sequence: ATGTATCCTAGCGAAATCATCGTGATTAGTGATGATGACGATGAGTCTGTGGTAGAAATGATTCAAAACACATCAGCATCTGATTCAAAATGCAGCACTAGTAAAACAAACACAAACATTGTAACCCCAGTAATTACTAATGGCTTTAAGAATGTCAAGAATGAATTAAATGAGCTTGTGGATGATGATGGGTTTGGTAATAACGATGATGAGAATTATAATTTTTTGATGCAAGAGTTGTCAGATCTTATAAATTCATATAAATCTAATTCAGTTAATCAAGATTCTTTGATAGTCCCTGAGATAGCTGAAGAAAATGTTGACGAGAGTACTCAGAATAATAATATGGGTGAAGGAAAGCATATACAGATAGTGAGCGTAGAGTCATTAAACCATCGAATAAACCAATGGATGGATACCAGTATGGAAGAAGAATTTGTTCCCCCCGTTGATTATCAAGATCAAAAAGTATTTGAGGGAAATTTTAATAATGTTGTGGCTAACAATCATCAACATGAATTGTTAAAATTGAATTATGATAATTCAGAAAGTTTATTACAAAGTCCAAATGATCCGTGGATGAAAACTCCGATGAACAAGCTAGAACTTAAAGTTTTAAACAAATATCTTCCTATGGTCCAGTTAACTAAGATTTCTTTATCGAAAAATAGTATTAATTTAAAGAATTTTATCAAAGAACAGTTGCAAATTGATGCTAATGTTAATGTCCCTGATTTAAAACCATTAATTCATCAAAATTTGGTGAATGTAAAACAGGAAGTTGGCTCAGAATTAAATTCAGTAAATGATGTTAATCAAGGATTATTTATCTGCAAGACTTGTATTAAAACATTCAATTCAAGAGATGCATTCGAAAAACATATTAAATGTTATCACCCTGGCAATAAAGTTTACAAGTGTGATGATTGTCATTATGCCACTGACATACATATGTCAATGCAAACTCATCGATGGACACATATCAAGGAACGTCCGTTTCGATGTCGTCTTTGTAATTATGGATCTAAGATACAACAAAATCTTAAAATGCATATCCGGAGAATTCATACAAATGAGCGGCCTTTCGTGTGTCCACACTTACCATGTACGTTTGCGGGAGCATATTCTCAAGATTTAAAAAACCATATAAAAAATAGACATTCCAAGAATGATAAAACTGTCTCGCTAGATCATCTCAGTAATAACCGATCTCGCTCCCATAGACACTTAGAAAGCGATTCCTCGAGTGTTAATTTGAAAGAAATAAAAACTGAAATTAATTCTATTAATCCTACTGAAAAAATGTACCCGTGTACGACTAGAAATCAAATTCTTAATCTAATAGTCAAGATTTTTTATCCAGAGAAAATGTATTCCGGGGAAGTCATTCTTGTTAGTGATGAGGATTCCGAGGTAGAAGTTTTAAACAACACATCGTCAGCTGATAAAAATTTAAACGTCAATATAACTACAAGATCGCAGATTATTTTTAATAGCTCTAAAAGCATCAACAAAGAATTATATAAACTTAAGACTAATGATGATGATGAGTTCGTGAGTGATGATGATTATCATAATCGTTTGATGCAAGAATTATCAAATGTTTTGGCTGTGAGTAATTTCAATTTTGACCATCAAAATTTTTGTCCCATCACTCCGGACACTGATGTCCCTGAACCGAGTTATAAAAACATTTTTGTCTCTGAGGATAATCAGAGTAATGATTTAAAGGATGGGAATCGTATACAGATATTGAAAGTGGAATCATTAAGCGTATGGGAAGGACAATATACAGACAATCAATCAGAACATTACTTTCTACCGGTTGATGATGAAAGTAGTGGAAAAAAATTGGAAGAAAAAAGTCAAACAACTAGGCATGAACTGGATATTTTAAATAAATATCTTCCTGTTGTTCAGCTTACAAAAGTTTTGCTGCCTGATAACAATATTCATTCAGAAAATTTTAATAAAAAGCACTTACAAGTTGACAATACTAATGCAAATAACGTAAAGAATGCAAAAGTTGCTGTAGAAATGTCCCACGCTAATAATGATGATCAAAAAGTTTTTGAATTTGAATGCAAAACTTGTCATAAAACATTCCATTCGAACGATTTACTCAGTAAACATATTAAATACCATATAAAGAGAATTCATACAAAGAAGATGCCCTTTGTGTTCTCACATCCTCCGTATACTTTCGCTGGAGCAACTTCTCGAGATCTAAAAAGACTCTCTAAAAAGGAACGTATCAAAAATAAGTACTATAAATGCTCTTTTTGTAATTTTAAGACTGTTACTTTACGTTGTTTTAATAATCATTTACGTCGCTTTCATAATGATAAAGCACCATACACCTGTACGGAATGTAATTACAGTAGTACTAATTTAAGAGCGTTGAATGTTCACATAAATCATCACTTTGCCAAAGAAACTAATCGTTGCTCTCAATGTACGTACTCTACTGCATGTAGTAGTGAACTTCTATCTCACATTGAAATTCACAAAAGTAAAGAATATAGATGTAATCTTTGTAGATCGGTATTTTCAAAAAAAGAAAGTTTTAGTAAGCATAAACTTGACAATCATACAGTATTTCCGTTCAATCAAACAGCTAAGTGTGAATTTTGCGAAGATCAATTTACAAATAAATATAATAAAAGAATCAAAATGTTCACATTAGTTGATGATATGATAAAATATCCTTGTGATGGAATAGATAACGTTATTAAAATATCCAATTTCAATAATAATGGAATCAATATGAACTACGATTACACGGAGCATATAAACAGTGCAACAGATACTCAATTCCAACCACCACCAAATACCGAACCGACATTAACAGAAAATATTAATTATATCTCAACATCATATGAACTTTTGGGTTCACAGAATGACGCTTATCTCAACTCATATCAAAATCAACCGGTTCAAAATTTAATATCCATAGATCAAAATGAACAAAATATCATACCTATTGTTCCTGAGTTTTCTTATCCAAATGTAAATCTTATGCCGACTATTCCGATCAACGATTATGCACTGGTTCCTTGTTATTATTTGGTGGTACCTGAAGATGGTCTTGTTGCGCCACCCATTATCCCAGTGAACACTATTTCAGAACAAGTTCCAGTGAGATTTGAAGACCGCAGTAACTTTGTGATGGTAAACGTAGACAATGAGTTGGAAAAAACCAATGGTAATTTTATTTATCTTAATAATGTAGTCGCTCCAAATACTCAGGATTTGTTAAGTCAAGAAAATGAAGTAATTGATACTTGCCAGACTTCTGTCGCTGATTTTCCAAGTTGTGAATTGCCAACAGACTCAGTAGACAAATCAGTATCTTTAGAATCTTCATTAAACATAGAAGACCAGGAGACACCCGATGCTTCTATTTCTTCTCATCCTGAATCTGGAACTAAATCCCAGGCAACAGAAAAATCCCATCCATGTAAAATTTGTAAAAGAAAATTCAACAGTTTAAATCAATTAGAAATTCACATGGGAATTCACGACGTTGGAGATAAATTATTTAATTGCTCTGTATGCCATGTCAATTTCCATCAGTTTCATCTTCTAAAACGGCACATGCGGATTCATAAAAGCACCGAAACATTTACATGTGAAATTTGTTCAACAAAGTTTGAGTGGGCTGAGTTTTTGGAACAGCACAAAAAGCGTTGTAACGATGCTAAAAAGCCGTATCATGTGTGCAATGTTTGCCAAATGAAACTCAGCAGTCTTTTGAAACTAAAACAGCACCTGCGTACTCATAAGGAGAAGCAGACATATGAATGCAGCGTTTGTAAGAAGAAATTCATCTGGCCGTCACTGTTAAACGTTCATATGCGCATCCACACCGGTGATAAAAGATATGAGTGCGATATTTGCCATGTGAAATTTACTGCGGCTTGTAATATGAAGAAGCACAAGCTCACGCATACAGGCGAGAAACCCTTTCAGTGTGACATTTGTCAGGCAAAATTTACTCGATCAATTAGTCTCACTCAGCATAAAGCAACCCATACCAGCAGAACTGAAGAGTGTGAGATTTGTAAGTCGAAATTCAGGGGACCCTGGAATCTAAAGCGACACATGCGGATCCATACTGACGAAAAACCTTTCAAGTGCGACGAATGCCAATCGACATTCTCTCAAAAATTCTACTTGTCAAAACACATCCGTCTTCACTACAACAAAAAATCTTACGAGTGTGATTATTGTAAGATGAAATTGTCTCAAAAATATTGCTTGATTCGCCACATGAAGATTCACGCCGGCAGTAGCGCGTACAAATGCGATGAATGCCACAAAAAATTCCATTCCATACGAGGCTTGAGTCATCACAAGTGCGTCCATACCGGAGAAGTCCCATTTGAATGTGATGTTTGTAAGAAAAAGTTTTTGAAGTTAAAGCACTTGCTCAAACATGAAAATATTCATAAAACGAAGAAAATGTACCACTGTGATATTTGTAACGCCGGATTTAACCAAGTCGGTCATGTTGCGGTCCACAAAATAAGGCATCATGAATCCCAACCGTCTCAAGATTTTAAATGTAAATTTTGTGATGAATCTTTCAAGAGTAGTTATTTCTTGAAGCTTCACCTTAAGAATCATAAGAATGAAAAATATTTTTACTGTAACATTTGCTTATATAAGACAAGATGGCCTATTTCAATTAAAGTTCATATTCAAAATCACTCAAAACCAGGGTTGTATATTTGTTACGACTGTGGAAGATCATCGAAAAGAAAAATTTTGTTACTACAGCATAGGAAGAAATTTCATAGTTCTTAA
Protein Sequence: MYPSEIIVISDDDDESVVEMIQNTSASDSKCSTSKTNTNIVTPVITNGFKNVKNELNELVDDDGFGNNDDENYNFLMQELSDLINSYKSNSVNQDSLIVPEIAEENVDESTQNNNMGEGKHIQIVSVESLNHRINQWMDTSMEEEFVPPVDYQDQKVFEGNFNNVVANNHQHELLKLNYDNSESLLQSPNDPWMKTPMNKLELKVLNKYLPMVQLTKISLSKNSINLKNFIKEQLQIDANVNVPDLKPLIHQNLVNVKQEVGSELNSVNDVNQGLFICKTCIKTFNSRDAFEKHIKCYHPGNKVYKCDDCHYATDIHMSMQTHRWTHIKERPFRCRLCNYGSKIQQNLKMHIRRIHTNERPFVCPHLPCTFAGAYSQDLKNHIKNRHSKNDKTVSLDHLSNNRSRSHRHLESDSSSVNLKEIKTEINSINPTEKMYPCTTRNQILNLIVKIFYPEKMYSGEVILVSDEDSEVEVLNNTSSADKNLNVNITTRSQIIFNSSKSINKELYKLKTNDDDEFVSDDDYHNRLMQELSNVLAVSNFNFDHQNFCPITPDTDVPEPSYKNIFVSEDNQSNDLKDGNRIQILKVESLSVWEGQYTDNQSEHYFLPVDDESSGKKLEEKSQTTRHELDILNKYLPVVQLTKVLLPDNNIHSENFNKKHLQVDNTNANNVKNAKVAVEMSHANNDDQKVFEFECKTCHKTFHSNDLLSKHIKYHIKRIHTKKMPFVFSHPPYTFAGATSRDLKRLSKKERIKNKYYKCSFCNFKTVTLRCFNNHLRRFHNDKAPYTCTECNYSSTNLRALNVHINHHFAKETNRCSQCTYSTACSSELLSHIEIHKSKEYRCNLCRSVFSKKESFSKHKLDNHTVFPFNQTAKCEFCEDQFTNKYNKRIKMFTLVDDMIKYPCDGIDNVIKISNFNNNGINMNYDYTEHINSATDTQFQPPPNTEPTLTENINYISTSYELLGSQNDAYLNSYQNQPVQNLISIDQNEQNIIPIVPEFSYPNVNLMPTIPINDYALVPCYYLVVPEDGLVAPPIIPVNTISEQVPVRFEDRSNFVMVNVDNELEKTNGNFIYLNNVVAPNTQDLLSQENEVIDTCQTSVADFPSCELPTDSVDKSVSLESSLNIEDQETPDASISSHPESGTKSQATEKSHPCKICKRKFNSLNQLEIHMGIHDVGDKLFNCSVCHVNFHQFHLLKRHMRIHKSTETFTCEICSTKFEWAEFLEQHKKRCNDAKKPYHVCNVCQMKLSSLLKLKQHLRTHKEKQTYECSVCKKKFIWPSLLNVHMRIHTGDKRYECDICHVKFTAACNMKKHKLTHTGEKPFQCDICQAKFTRSISLTQHKATHTSRTEECEICKSKFRGPWNLKRHMRIHTDEKPFKCDECQSTFSQKFYLSKHIRLHYNKKSYECDYCKMKLSQKYCLIRHMKIHAGSSAYKCDECHKKFHSIRGLSHHKCVHTGEVPFECDVCKKKFLKLKHLLKHENIHKTKKMYHCDICNAGFNQVGHVAVHKIRHHESQPSQDFKCKFCDESFKSSYFLKLHLKNHKNEKYFYCNICLYKTRWPISIKVHIQNHSKPGLYICYDCGRSSKRKILLLQHRKKFHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00381331;
90% Identity: iTF_00381331;
80% Identity: -