Crub021041.1
Basic Information
- Insect
- Cotesia rubecula
- Gene Symbol
- tfip11
- Assembly
- None
- Location
- scaffold:8660-11311[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 1.3e+04 -4.2 0.1 215 240 218 242 215 245 0.80 2 3 1e-89 7.9e-86 288.4 10.9 1 275 300 567 300 567 0.97 3 3 0.025 1.9e+02 1.8 0.0 157 190 579 611 572 625 0.53
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAAATGAATTTCACTCCAATCGGCCCAGGAGAAAATTCACAAAGGAGCAACAGATGCTTGGAATGTGGGCAGATGACAGCGAAGAAGAGGAAGTCCCATCAAGAGCTCCTCCAAGAGGATTTAATAAAGGACCTAAGAATTACACAGCCCCGGTTAGTTTCGTAGCTGGAGGGATCCAGCAAGCGGGAAAGTCCAAAGATAAAGACAAAAAAAAGGAAAAAGACAAGAATGATGAAGAAGATGACGAGGACCAGGATGTGTCAAACACGTCCAGTGATTCCGAGAAAGAAGAAGCACCCTCGAGGCCATCATTTTCTATGAATGCTGACGCAGTAGGTGGAATCGCTGGGCTCAGAAAGAAACACGAGGATGTTGAGAAGACCAAGGAGTTCAAAGCCAAGCTGTCGCAGTGGCGCAAGACTGATGGAGTCACGAAGAAGAAGACCAAGTACTCGTACAAAAGCGTCGATCAAGTTCTCGAGGATGGGAAGCTCAGGCCAAATGTCAAGACTTCCACCAGTGACATGAGTCGTGTAAAAGTCATCGACATGACGGGTCCAGAACAGAGGGTACTCAGCGGGTACCACGCCATAGCCGGTCAACACCGGCCTGATGATTCTGCTGCTGAATTTGACAAAAAGTCTCTAACTAATTTTGCACTTCCAGAACTCCAGCATAATTTGAACTTGATCGTCGACATGTGTGAGCAAAATATAATCCAAAATGACAGAAAAACTCGGCATCTAAGCGACAGAGTGGTGGCTCTCGAAGCCGAGCAGAAGAATATGGAAAAAGTTATTGAGCAACATGACCAGCTGATCAACGCTCTTGACACCGTTGTGAAAATTATTGACAATCTGATAATCAATAACAATGACATGAGTCTCGATGAGACTGCTGAAGCTTTCAGAAAACTGCAGGACCAGTATTACAACGACTACAAGACGTACGAGCTCGGGGAGCTGGCCAGCAGTCTCGTAACTCCGAAACTAGCAAGCTCGATGGCGAAGTGGAATCCTCTGGCGGAACCAATGCATCACCTCGACTCGGTAAGGCAGTGGAAAGACATCCTGAGCATCGGAAACAACCTGATAGAAGCCAGAACATCAACCACGCCGTATGATCAGCTAATTTGGAACGCCTGGATGCCTCCAGTTCGCAGAGCTATTGAGCAGTGGGCTTGTCGACAGCCAGACCCGTTGATTGAGCTCTTCGAGAACTGGATGCCTTTCATCCCCAAGTTCATCATGGACGGCTTGGCGATGACAGTCCTGCAGAAACTTACTGCTGAGGTGACTGAGTGGGATCCGAGGACTGATACAGTCCCCATTCACATGTGGATCCACCCGTGGCTGCCCTTGTTGGGAGATAACATGAATACTGAGATTTACCCGACAATCAGACGGAAACTCGGCTCTGCGCTGGGAAGCTGGCATCCGTCAGACAGAACCGCGAGACTCATGTTGGAGCCTTGGTCCCAGGTATTTCCCAAAGGTGATATGGAGGCTTTCCTCATCAAAAACATCATGCCAAAACTGGAAATCACAATGTCTGAGTTTATTATTAATCCACTCTCCCAGCATCTGGACAACTGGAACTGGGTCTACGACTGGGTGGGCTTGCTGCCAGTTCATACAATGGCTGGACTACTGAACAAGTGTTTCTTCCCCAAATGGCTTCACGTTTTGGCAGCTTGGCTCAATCATTCGCCTAATTATGACCAGATCACCCAGTGGTACCTCGGCTGGAAGAAGATGCTCAATGACAAGCTTCTGGCCGAGCCTGTCATCAAGGACAACTTCAAAAAAGCCCTGGATATGATGAATCGTGCTGTTTCTAATACTCAGGGACTACAGCCAGGCTCTGCTGAGTATGTTTCGTACCTAATGAGTCTTGAAAGAACCCAGCCAGCTCCTCAAATTCCGGCTTCAGCTCAACCCCGAATTGATAGACTCGCAGAAGCTGTACGGACTGCCTCGCAAATTCCTCAAGGCTTCAAGGATCTTGTGCAGAAAAGATGCGCTGAACGAGATATTGTCTTTATGCCTTTGGCGAATCGATATCGCGAGGCTAAGCAAGTATATAAAGTTGGAAACGTCCAGGCTTACATTGACGGTAATGTCCTTTTCGTTAACCAGAAAGCGTCTAATTGGGTACCAACTTCCCTCAACGCCTTGCTGGACATGGCTGAGCTGTGA
- Protein Sequence
- MSDDENEFHSNRPRRKFTKEQQMLGMWADDSEEEEVPSRAPPRGFNKGPKNYTAPVSFVAGGIQQAGKSKDKDKKKEKDKNDEEDDEDQDVSNTSSDSEKEEAPSRPSFSMNADAVGGIAGLRKKHEDVEKTKEFKAKLSQWRKTDGVTKKKTKYSYKSVDQVLEDGKLRPNVKTSTSDMSRVKVIDMTGPEQRVLSGYHAIAGQHRPDDSAAEFDKKSLTNFALPELQHNLNLIVDMCEQNIIQNDRKTRHLSDRVVALEAEQKNMEKVIEQHDQLINALDTVVKIIDNLIINNNDMSLDETAEAFRKLQDQYYNDYKTYELGELASSLVTPKLASSMAKWNPLAEPMHHLDSVRQWKDILSIGNNLIEARTSTTPYDQLIWNAWMPPVRRAIEQWACRQPDPLIELFENWMPFIPKFIMDGLAMTVLQKLTAEVTEWDPRTDTVPIHMWIHPWLPLLGDNMNTEIYPTIRRKLGSALGSWHPSDRTARLMLEPWSQVFPKGDMEAFLIKNIMPKLEITMSEFIINPLSQHLDNWNWVYDWVGLLPVHTMAGLLNKCFFPKWLHVLAAWLNHSPNYDQITQWYLGWKKMLNDKLLAEPVIKDNFKKALDMMNRAVSNTQGLQPGSAEYVSYLMSLERTQPAPQIPASAQPRIDRLAEAVRTASQIPQGFKDLVQKRCAERDIVFMPLANRYREAKQVYKVGNVQAYIDGNVLFVNQKASNWVPTSLNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006060;
- 90% Identity
- -
- 80% Identity
- -