Basic Information

Insect: Cotesia glomerata
Gene Symbol: -
Assembly: None
Location: Contig14936:1-5166[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00062 0.067 14.0 0.0 3 23 762 782 760 782 0.96

2 17 0.42 45 5.1 0.3 1 19 788 806 788 809 0.90

3 17 0.82 88 4.2 1.2 2 23 815 836 814 836 0.95

4 17 4.3e-05 0.0047 17.7 1.2 3 23 845 866 844 866 0.98

5 17 0.0036 0.39 11.6 2.1 1 23 873 896 873 896 0.95

6 17 8.8e-05 0.0095 16.7 0.7 1 23 902 925 902 925 0.94

7 17 0.16 17 6.5 1.3 2 23 933 953 933 953 0.96

8 17 9.6e-08 1e-05 26.0 2.8 2 23 959 980 958 980 0.97

9 17 8.6e-07 9.3e-05 23.0 0.8 1 23 986 1008 986 1008 0.99

10 17 0.004 0.43 11.5 2.8 2 23 1020 1042 1019 1042 0.95

11 17 0.11 12 7.0 2.6 1 23 1048 1071 1048 1071 0.95

12 17 0.0029 0.31 11.9 3.1 2 23 1093 1115 1092 1115 0.95

13 17 0.00034 0.037 14.8 0.6 2 23 1122 1144 1121 1144 0.96

14 17 4.9e-05 0.0053 17.5 1.1 2 23 1152 1173 1151 1173 0.96

15 17 0.0044 0.47 11.4 2.7 1 23 1179 1202 1179 1202 0.96

16 17 3 3.3e+02 2.4 3.2 2 23 1209 1230 1208 1230 0.96

17 17 0.051 5.5 8.0 2.5 1 23 1236 1258 1236 1258 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00062	0.067	14.0	0.0	3	23	762	782	760	782	0.96
2	17	0.42	45	5.1	0.3	1	19	788	806	788	809	0.90
3	17	0.82	88	4.2	1.2	2	23	815	836	814	836	0.95
4	17	4.3e-05	0.0047	17.7	1.2	3	23	845	866	844	866	0.98
5	17	0.0036	0.39	11.6	2.1	1	23	873	896	873	896	0.95
6	17	8.8e-05	0.0095	16.7	0.7	1	23	902	925	902	925	0.94
7	17	0.16	17	6.5	1.3	2	23	933	953	933	953	0.96
8	17	9.6e-08	1e-05	26.0	2.8	2	23	959	980	958	980	0.97
9	17	8.6e-07	9.3e-05	23.0	0.8	1	23	986	1008	986	1008	0.99
10	17	0.004	0.43	11.5	2.8	2	23	1020	1042	1019	1042	0.95
11	17	0.11	12	7.0	2.6	1	23	1048	1071	1048	1071	0.95
12	17	0.0029	0.31	11.9	3.1	2	23	1093	1115	1092	1115	0.95
13	17	0.00034	0.037	14.8	0.6	2	23	1122	1144	1121	1144	0.96
14	17	4.9e-05	0.0053	17.5	1.1	2	23	1152	1173	1151	1173	0.96
15	17	0.0044	0.47	11.4	2.7	1	23	1179	1202	1179	1202	0.96
16	17	3	3.3e+02	2.4	3.2	2	23	1209	1230	1208	1230	0.96
17	17	0.051	5.5	8.0	2.5	1	23	1236	1258	1236	1258	0.95

Sequence Information

Coding Sequence: ATGTCAGTGCAGTCAATAAAGGACGATAAAACCAAATGGAAAATGAAGGACTCAGCGTACGTATCAGATTCCCATGTTGACTCAAAACATTTTTCAAATCGTAATCATAATGAAAGAATTATTAACTCTGATCAAAATCACAGAGTTACTGGAACTAACCCAGAATCTAGCTCGAGTTTTCTGCTATCGTCACATGACAAAAATTCTATAAGTAGAAATAATTGTTTTGTAAAATCAAATACAACAGGAGATCGGAAAAACGTTGATAGTAGTAATATGTTAAGAAATGTCAAAGTGAATACAGTATACAATGAAAAAGAATTAAAAAATATTTCTTCATTAGGTAGCTTAGGGATTCTAACATCGAAAAATATGGCAACAGTAAAAAACGATAAATGTGTTAAAAATATAAATGATTTGAAAAAAGTGATCCCCAAAGTTAAAGTTGTCGAAAGTGAAATGAATAATTCCAACCAAGTAAACAAAAGTTATAATTTTTTAGATGTAGATTCAAATAACGATAATATATCACATGCAGAAAATAATAAAATTCAACTAAATAATTATTGTCGTACCTGTGCTGGACTAAAAATTCCATTAGTAGATATTTTTGGTGAAAGAGGAATTCAAATGAGGTTGAATCAGCAAATGAAACATCTAGAGCATATTGATGAAAATGATAGCTTGCCGACACAAATATGTATGGACTGTATTTGTGATTTAAAAATGAGTTATAAGTTTTTTATGCAAATAAAAAAGGCTGAAGTTAAATTAAGATCAATTTTTATGTCTTTAAATTCAGTAAATACGCGTCAAAAAGAAATGAAGCCCGATAAGTCGGCAACAAAAATGTATCATAAACTAGACGAAATAATTGAGCATCCATCGATAGAAAATAAATCAGAATTTTCGCAATTAATCATTAGTTCAAGCGTTAAACCCCCAGATAGTTCGTATGAATACTCAATGAGTGATTCGGTAGAACCTAAAACAAAAAAACAGTGCAGTGAATATAGTATTAATAAAGAATTTATTTCTGACGATTCTACGCTCTCAGTAGGTAAATGTGATGATTTACAATTTGATGTGGGAACAGATTCTAGTTCAAATATTTCACAAGGAAATGCTGACGTTACCAATGAAAAAGTAATTTTTTCTGAAAAAGTTGAACCATGTGAAAGAAGGGAAGAAAAATACGAAATCTCAACATCTGAATCAAACTATCAATATGATTCAGAACTTGATAATTATAGTAAAGTAGAGGCTAAAAGTATAAATCAATTGAACCTAGATGTCCATGAGCCTGAGTCTAATTTATTTATAAAAGAAAATTTAAAAGAAACAAACATTAGAAAAACAAAAATTTCATTAGATGCAGTTGACAATATAGAATCCCTGGTAAAAGAATCAAAACTTGATAAATTAGATACTATGGTTGGTAAAAAATTAGACGATCAAGGTATAATGTACGTTACTGTAAAAGGTTCTAAACCGAGTGAGATGCTTTTGGTTAAAGTTAAAAAAATGGATAAAGCTGACGACAAAAAAGGAGGGAATTGTTTTAATAAGAACAACACTGAAGCCAGAATTGCCGAAAAATTTTGTAGAACTTTATCATACAAAGATATATATAATAATCGTACGAAAGAAATAGAAAACCGCGGAGCAATAATTGAAGAACAAATTGAAGAATACAAGAAAAAACGTGAAAAATTACTTGGTGTTGTCAATTGCAGTAATAGTACATTTGATACTGATGATTCAATCAATTCTATTAATATAAAGAACTCAGCCGGAGAAAACAATTCTTTTATGAAGATTCAACGACTCACTCAAATAGAATATATCAGTGAAAATAAAAATAGTAACTTGATAGATATTACAAAAAATAAAAGCTCACATTTCCGTTATGTTGATCCAAACAATAAACAAAATAATGAATTGACAGAAAAAATCTCTAAATATTCGATGTCTATGGCAACTACTCAACAAAAATCCGAAAAAAATAATTTTTCAAAAGGATTGTCAAAAAATGAAGTAATTATTTCAGTGGGAAAAGGAAACGTAGATAAACTTTCTCAGATTTTAGGTAGAAATAAAAAAAATCTACTAGAATTTCAAGAATATCTTAATCAAAGGAAAATTATAATTGAACGATTGAAAGATAAAGACGTAATAGCTTTATATGAAAACCTTAATGATGTAATAAACCAAAAAAAATTACCAGGTTCAACCATCGAAAATCTGTCTGTGAATCCTACTATCAAAATTAATCTATTAGATTGTGATTACTGTTTAGAAATATTTTATTCTCAAGAAGATTTGGAAGCACATCTTAAAGTTCATGATTTCAAAATTTTATTTTTTTGCGAGGATTGTGAATCTGAATTTTCAACTAATAAAGCTAAGCGGGCACATAGTATAACATGTGTAAAAAAATTGATTTGTAAATATTGTAATTTTGTGCTAGAATCAAGAGGAAAAAAACGCCAACATGAACAAAAGCACTGTGATGCTATTTATGGTCAATTATGTGACATATGTGGTGAAAAATTTAAACACCAAGGTACATTAGACCAACACATTAAAACCCAACACATGAACTGGGAAAAAATTTTTCAATGTCCTAAATGTCCTAAAAAATTTGCCTTCAAACAGAAATTAAGCTTTCATTTAAAATCAGTTCATACTTCTTTACGAGCTTATCTGTGTGAAGACTGTGGAGCTGACTTTAAAAATCCAGCATCTCTTAGGCATCATCGTATTCGAAAACATCAGCCGTCAAGTAATAAACGTGAATGTCAAGTTTGTCATAAAGTCGTTCCATTTTATAGCTTATCAAAGCATATGTACACTCATAAAGCATACACAATCAAATGTCCGCATTGTGATAAAATGTTTAAAAATTCATCTACACTAAAGCAACATCTACGTATTCATGAAGATCGGCGACCATACCGCTGTGAACATTGTGGTGCCGGATTTAATCGACGAGATGGTTTAAGATTGCACATGAGGGTTCATTTAAAATCTAATAGCCGAGCTCTTAGGGAATGTTCTTGCCAGATATGTTCAGAGAAATTTCCTAATCATTCAATGCTCGTTATCCATCGGAATCGTGTTCATAAAGATGGCAAACAATATACTTGCCATATATGTAACCGCTCTATGCTTTCTTCCAGATCATTAGAATGGCATATGTCTCATATTCATAATCAAATACCTCCGGGTATTTCTAGAGATCAAGCGGATCCGAATCTTGAAAAAAAAAGAGTATCATGCAATCATTGTAATAAAACATTCAAAACTGAAATGATTTTAAGAACTCATATCAAAAATACACATATGGAAAAGAATCCAGTCAAATGTTTAGACTGTGATTTAATGTTTACGTCAGAAGTAAGGCTGAAACACCATATGATGATTGCTCACAATCGATTTGAAGGTACACTCATTTGTCCTCATTGTCCTAAACGTTTTGTCAATCAGTTAAGACTCAAAACTCATATGATATCACATTCAGAAGATAGACCATATACATGTGAACTTTGCGGTTTTAATTTAAAAACCAAAATTCAATTAATAAAACATCACCAAAATAAACATAGTGATGAGAGGCCGCTTCAATGCCGATACTGTGCTTGGAGATGCAAGCAAGTTAGTGCATTGGTTTGTCATGAAAGAACACATACGAATGAGCGACCATACTCTTGTATTGTTTGTAAACAACGCTTCAAATATCTTGGAGATAAAAATAAACACCAAAGAAGGCATGAGAGCCTTGGTGGTTCAGGATTTAAACGAATTGTAGCCGGAAGAAATCTTAAACAATCCAAAAATCATGAAGCCGAAAATTCATCTTCAGATCAAGAACAGTTGGAACTAGAAGGCGAATATGAAACAATCATAGAAGGCGAGCAACAATTCGAGGAGCAAGTTGAACATGAAACGATGTATGAAGATGATCATGAAACTATCAAATTTGAAACTGTAGAAGTTAATGGAAACTATGAACAGGAATATGATGAAACTTCCGGAGAAGTTTCTGACTCGGCTGAAGTCATCATGAGCATTGAAGATACGCCAGTCTATACTGAAGAGGTTACTGCTGATAATATTGAGCATATGGGCATAATAGCTGATGATATTACTAATCACATATTACAACCTGGAGCAATAGTGCAGATACGACAACAAGATGAAAATGGTAAAATTCAAGTTATTCCTGTTATGCTAGCTTTACCTGAGCTGAATGAATCAGGTACTGAAGTGAGTTTAACAACTGCATCAATTATTTATGATGATGAAAACAATTGA
Protein Sequence: MSVQSIKDDKTKWKMKDSAYVSDSHVDSKHFSNRNHNERIINSDQNHRVTGTNPESSSSFLLSSHDKNSISRNNCFVKSNTTGDRKNVDSSNMLRNVKVNTVYNEKELKNISSLGSLGILTSKNMATVKNDKCVKNINDLKKVIPKVKVVESEMNNSNQVNKSYNFLDVDSNNDNISHAENNKIQLNNYCRTCAGLKIPLVDIFGERGIQMRLNQQMKHLEHIDENDSLPTQICMDCICDLKMSYKFFMQIKKAEVKLRSIFMSLNSVNTRQKEMKPDKSATKMYHKLDEIIEHPSIENKSEFSQLIISSSVKPPDSSYEYSMSDSVEPKTKKQCSEYSINKEFISDDSTLSVGKCDDLQFDVGTDSSSNISQGNADVTNEKVIFSEKVEPCERREEKYEISTSESNYQYDSELDNYSKVEAKSINQLNLDVHEPESNLFIKENLKETNIRKTKISLDAVDNIESLVKESKLDKLDTMVGKKLDDQGIMYVTVKGSKPSEMLLVKVKKMDKADDKKGGNCFNKNNTEARIAEKFCRTLSYKDIYNNRTKEIENRGAIIEEQIEEYKKKREKLLGVVNCSNSTFDTDDSINSINIKNSAGENNSFMKIQRLTQIEYISENKNSNLIDITKNKSSHFRYVDPNNKQNNELTEKISKYSMSMATTQQKSEKNNFSKGLSKNEVIISVGKGNVDKLSQILGRNKKNLLEFQEYLNQRKIIIERLKDKDVIALYENLNDVINQKKLPGSTIENLSVNPTIKINLLDCDYCLEIFYSQEDLEAHLKVHDFKILFFCEDCESEFSTNKAKRAHSITCVKKLICKYCNFVLESRGKKRQHEQKHCDAIYGQLCDICGEKFKHQGTLDQHIKTQHMNWEKIFQCPKCPKKFAFKQKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHQPSSNKRECQVCHKVVPFYSLSKHMYTHKAYTIKCPHCDKMFKNSSTLKQHLRIHEDRRPYRCEHCGAGFNRRDGLRLHMRVHLKSNSRALRECSCQICSEKFPNHSMLVIHRNRVHKDGKQYTCHICNRSMLSSRSLEWHMSHIHNQIPPGISRDQADPNLEKKRVSCNHCNKTFKTEMILRTHIKNTHMEKNPVKCLDCDLMFTSEVRLKHHMMIAHNRFEGTLICPHCPKRFVNQLRLKTHMISHSEDRPYTCELCGFNLKTKIQLIKHHQNKHSDERPLQCRYCAWRCKQVSALVCHERTHTNERPYSCIVCKQRFKYLGDKNKHQRRHESLGGSGFKRIVAGRNLKQSKNHEAENSSSDQEQLELEGEYETIIEGEQQFEEQVEHETMYEDDHETIKFETVEVNGNYEQEYDETSGEVSDSAEVIMSIEDTPVYTEEVTADNIEHMGIIADDITNHILQPGAIVQIRQQDENGKIQVIPVMLALPELNESGTEVSLTTASIIYDDENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379826;
90% Identity: iTF_00379095;
80% Identity: -