Basic Information

Insect: Cotesia glomerata
Gene Symbol: -
Assembly: None
Location: Contig54551:8241-15163[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2 1.3e+02 3.6 0.1 2 13 10 21 9 23 0.89

2 14 3.2 3.4e+02 2.4 0.2 3 17 64 78 62 79 0.84

3 14 7.7e-05 0.0083 16.9 0.2 1 23 241 263 241 263 0.97

4 14 1.6e-05 0.0017 19.0 2.0 1 23 271 293 271 293 0.99

5 14 6.7e-06 0.00073 20.2 0.9 2 23 301 322 300 322 0.97

6 14 9.9e-06 0.0011 19.7 1.7 1 23 328 350 328 350 0.98

7 14 1e-05 0.0011 19.6 2.2 1 23 357 379 357 379 0.98

8 14 5.7e-06 0.00062 20.4 1.2 1 23 385 407 385 407 0.96

9 14 2.6e-06 0.00028 21.5 0.1 1 23 413 435 413 435 0.99

10 14 5.5e-07 6e-05 23.6 1.2 1 23 441 464 441 464 0.96

11 14 3.8e-06 0.00041 21.0 0.9 1 23 470 493 470 493 0.96

12 14 6.1e-06 0.00066 20.3 2.8 1 23 499 521 499 521 0.99

13 14 0.00012 0.013 16.2 0.7 1 23 527 549 527 549 0.94

14 14 0.00088 0.094 13.6 0.1 1 22 555 576 555 579 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2	1.3e+02	3.6	0.1	2	13	10	21	9	23	0.89
2	14	3.2	3.4e+02	2.4	0.2	3	17	64	78	62	79	0.84
3	14	7.7e-05	0.0083	16.9	0.2	1	23	241	263	241	263	0.97
4	14	1.6e-05	0.0017	19.0	2.0	1	23	271	293	271	293	0.99
5	14	6.7e-06	0.00073	20.2	0.9	2	23	301	322	300	322	0.97
6	14	9.9e-06	0.0011	19.7	1.7	1	23	328	350	328	350	0.98
7	14	1e-05	0.0011	19.6	2.2	1	23	357	379	357	379	0.98
8	14	5.7e-06	0.00062	20.4	1.2	1	23	385	407	385	407	0.96
9	14	2.6e-06	0.00028	21.5	0.1	1	23	413	435	413	435	0.99
10	14	5.5e-07	6e-05	23.6	1.2	1	23	441	464	441	464	0.96
11	14	3.8e-06	0.00041	21.0	0.9	1	23	470	493	470	493	0.96
12	14	6.1e-06	0.00066	20.3	2.8	1	23	499	521	499	521	0.99
13	14	0.00012	0.013	16.2	0.7	1	23	527	549	527	549	0.94
14	14	0.00088	0.094	13.6	0.1	1	22	555	576	555	579	0.91

Sequence Information

Coding Sequence: ATGACAGAATCCGTCAAGGAAATGCTGTACTGTTTGATATGTAACATCAAATTTAGCACATCCACGAGGAATAGCATTAAAATATTTGACAAAAATTCACTATGTGATTCGCAAAAAACTCTTTTATCAGCACTAAATCTCGTATTGGAGACCGAAGTTAATGAAGACAATGTGCACTCAGATGTCATCTGTAAAAAATGTTATAAATTATTTAATGAGTACGACGAATTAACCAATAGATTAGCCGAAATCAAGCACGATATTTTTGAAAACTACCGAAAGACAGTCAAAAAGCTGACTGATATTGTTGAAGAGGAATATAATGATCACGATTATGTAGAGCAGGAAAACCACGTCTTAGAAGAATTTTCCCCACATGCTATTGATGAAGAGTCAAACAAAACCAAGGACCTTTTGCTGGCAAAAGAAGAGCATGTTGACATCGAATATCTACAAGAAGATGACTCGGAGAATATAATTAATGAAGAGTACATCGACGATCCAGGTCCTGCAAAAATTATATTGGTAAAAGCAGAAAAGACTAAAAATAAGGACGTTTCTAGAAGAGTTAGGAGTGCTCGAGACGAAAATGAACCTCTATTACATCGTGATAAAAATACTAATACCTACACATGTTTACTTTGCCCGGACGATGATCAAATTGCGGGAGATACTCGTGAGATAGTTGCGCATTTAAAAGCTTCTCATGATATCCGGCTTTACGTTTGCGATATGTGTGGTGCAGAGTTTAAAAAGCGGAATGAATTGTCTTCGCACATGGACGAGCATATCGCCAAAGAGGACGGAGACTTCCAGTGTGAGTACTGCAATAGAATTTTCTCAAATTTAAGATTGTTTAGAATTCACAAGCGTGTTCATTATCCTCAAGCTAAATCGTGGACATGTGATCAATGTGGAAAGAAATACAGCTCTAAAAACTTGTTAGAAGAGCATCGTAACACTCACACTGGAAACAGGCCTTACGTTTGTCAAATTTGTAAAAAAGATTTTGCTTCTAAGTACACGTTCAAAGCTCATGAAAAAACTCACGAGGTTCGACCGCGGCCATTCGAATGCAAGGAGTGTAATAAGACCTTTTTGAGTCAGCAAAATCTTACTCAACATGAACGGACCCACTTGGGCATCAAAGAATTTGTCTGCCAACACTGCGGTAAAGCTTTTGGCTCCCAACACAACCTAGAAGTTCACAATATTGTGCACACTGGTCACAAACCCTACGTCTGCGACCAGTGTGGTAAAGCGTTTGCCAGGAAAGCCGAGATAAGAGACCACGAAAGAACACACACTGGAGAAAAACCTTATCAGTGTGAGTTTTGCGGTGCAACTTTTAGTCAACGCTCCAACTTGCAGTCCCACAAACGCGCCACTCACTATAATGATAAGCGTTACAAGTGCGATGATTGTGGAAAAGGTTTCAAGCGAAGAAGACTACTGGACTATCACATTAAAGCTCAGCATACCGGTGAAAGACCGTTCAAGTGTGAAACTTGTTCAGCGACATTTGTTTACCCAGAACACTTTAAGAAACACATGCGCATCCATACCGGAGAGAAGCCATATCTTTGCGAAGTATGCGGAAAAGCTTTTAACAGTAGGGATAATCGTAACTCGCATCGTTTCATTCACAGCGATAAAAAACCTTACGAGTGTTTGGTTTGCGGAATGGGATTCATGAGAAAACCACTTCTGTATACTCATATGCAGAACTTGGGACATCTAAATGATACTATTGTCGTTAATCAACCGAGATTAACTACTACTGAAGAACGAGTTATAACTATTCCTGAAGGAACTCAGTTATTGATTGACGGCGAGCAAGAAGATATGGAAGATACTGAATTATATGTAACAGATTTGAAAGATCATGTTATTATTCAGGAAGATGAAAATATTTATCAACATGAAGATGGTCTTGACATTCCTTCAGATGAAAATATTGCTGCAGATCAAATTGAACATATTGTAGTTAATAATCAGATTGCATTTGCTGACAGCAGTATGATTGAATGTAAAACAGAAGATACTGAAGAAGATGCAGAGATGTATAGTTACACTGATGACGGCGAAACAATGGTTGTACCTGCTAGTGAATACAAAAACCTTATTGGCAACAGCAAAGGCCCGGTACGATTAGTGCAGATGAGAATTTTGAACCCCGGAAGTGATGGCAAAAGCTATGTCAGCCTTGTCCAGCAGGACTCATAA
Protein Sequence: MTESVKEMLYCLICNIKFSTSTRNSIKIFDKNSLCDSQKTLLSALNLVLETEVNEDNVHSDVICKKCYKLFNEYDELTNRLAEIKHDIFENYRKTVKKLTDIVEEEYNDHDYVEQENHVLEEFSPHAIDEESNKTKDLLLAKEEHVDIEYLQEDDSENIINEEYIDDPGPAKIILVKAEKTKNKDVSRRVRSARDENEPLLHRDKNTNTYTCLLCPDDDQIAGDTREIVAHLKASHDIRLYVCDMCGAEFKKRNELSSHMDEHIAKEDGDFQCEYCNRIFSNLRLFRIHKRVHYPQAKSWTCDQCGKKYSSKNLLEEHRNTHTGNRPYVCQICKKDFASKYTFKAHEKTHEVRPRPFECKECNKTFLSQQNLTQHERTHLGIKEFVCQHCGKAFGSQHNLEVHNIVHTGHKPYVCDQCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAQHTGERPFKCETCSATFVYPEHFKKHMRIHTGEKPYLCEVCGKAFNSRDNRNSHRFIHSDKKPYECLVCGMGFMRKPLLYTHMQNLGHLNDTIVVNQPRLTTTEERVITIPEGTQLLIDGEQEDMEDTELYVTDLKDHVIIQEDENIYQHEDGLDIPSDENIAADQIEHIVVNNQIAFADSSMIECKTEDTEEDAEMYSYTDDGETMVVPASEYKNLIGNSKGPVRLVQMRILNPGSDGKSYVSLVQQDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382089;
90% Identity: iTF_00378209;
80% Identity: -