Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold3:2955608-2958637[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1 81 3.6 0.1 2 13 10 21 9 23 0.89

2 14 9 7e+02 0.7 0.6 3 10 64 71 62 78 0.67

3 14 6.4e-05 0.005 16.9 0.2 1 23 238 260 238 260 0.97

4 14 1.3e-05 0.001 19.0 2.0 1 23 268 290 268 290 0.99

5 14 5.6e-06 0.00044 20.2 0.9 2 23 298 319 297 319 0.97

6 14 8.2e-06 0.00064 19.7 1.7 1 23 325 347 325 347 0.98

7 14 8.6e-06 0.00067 19.6 2.2 1 23 354 376 354 376 0.98

8 14 4.8e-06 0.00037 20.4 1.2 1 23 382 404 382 404 0.96

9 14 2.2e-06 0.00017 21.5 0.1 1 23 410 432 410 432 0.99

10 14 4.6e-07 3.6e-05 23.6 1.2 1 23 438 461 438 461 0.96

11 14 3.2e-06 0.00025 21.0 0.9 1 23 467 490 467 490 0.96

12 14 5.1e-06 0.0004 20.4 2.8 1 23 496 518 496 518 0.99

13 14 0.0001 0.008 16.2 0.7 1 23 524 546 524 546 0.94

14 14 0.00073 0.057 13.6 0.1 1 22 552 573 552 576 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1	81	3.6	0.1	2	13	10	21	9	23	0.89
2	14	9	7e+02	0.7	0.6	3	10	64	71	62	78	0.67
3	14	6.4e-05	0.005	16.9	0.2	1	23	238	260	238	260	0.97
4	14	1.3e-05	0.001	19.0	2.0	1	23	268	290	268	290	0.99
5	14	5.6e-06	0.00044	20.2	0.9	2	23	298	319	297	319	0.97
6	14	8.2e-06	0.00064	19.7	1.7	1	23	325	347	325	347	0.98
7	14	8.6e-06	0.00067	19.6	2.2	1	23	354	376	354	376	0.98
8	14	4.8e-06	0.00037	20.4	1.2	1	23	382	404	382	404	0.96
9	14	2.2e-06	0.00017	21.5	0.1	1	23	410	432	410	432	0.99
10	14	4.6e-07	3.6e-05	23.6	1.2	1	23	438	461	438	461	0.96
11	14	3.2e-06	0.00025	21.0	0.9	1	23	467	490	467	490	0.96
12	14	5.1e-06	0.0004	20.4	2.8	1	23	496	518	496	518	0.99
13	14	0.0001	0.008	16.2	0.7	1	23	524	546	524	546	0.94
14	14	0.00073	0.057	13.6	0.1	1	22	552	573	552	576	0.91

Sequence Information

Coding Sequence: ATGACAGAGTCCGTCAAGGAAATGCTGTACTGTTTGATATGTAATATCAAATTTAGCACGTCCACGAGGAATAGCATTAAAATATTTGATAAAAATTCACTATGTGATTCGCAAAAAACTCTTTTATCAGCACTAAATCTCGTATTGGAGACCGAAGTTACTGAAGACAATGTACACTCAGATGTCATCTGTAAAAAATGTTTCAAGTTATTTAATGAGAAGTTTGAGATTAAAGCCGAAATCAAGAACGATATTTTTGAAAACTACCGAAAGACAGTCAAAAAGCTGACTGATATTGTGGAAGAGGAATATAATGATCACGATTATGTAGATCATGAAAACCACGTCTTAGAAGAATTTTCCCCACATGCTATCGATGAAGAGTCAAACAAAACCAAGGACCTTTTGCTTGCCAAAGAAGAGCATGTTGACATCGAATATCTACAAGAAGATGACTCGGAGAATATAATTAATGAAGAGTACATCGACGATCCAGGTCCTGCAAAAATTATATTAGTAAAAGCAGAACAGACTAAAAATAAGGAAGTTTCTAAAAGAGGTAGAAGTGCTCGAGGCGAAGATGAACCTCTATTATATCGTGATAAAAATACTAATACCTACACATGCTTACTTTGCCCGGACGATGATCAAATTGCGGGAGACACTCGTGAGATAGTTGCGCATTTAAAAGCTTCTCATGATATCCGGCTTTACGTTTGCGATATGTGTGGTGCAGAGTTTAAAAAGCGGAATGAACTGTCTTCGCACATGGACGAGCATATCGCCAAAGAGGACGGAGACTTCCAGTGTGAGTACTGCAATAGAATTTTCTCAAATTTAAGATTGTTTAGAATTCACAAGCGTGTCCATTACCCCCAAGCTAAATCGTGGACATGTGATCAATGTGGAAAGAAATACAGCTCTAAAAATTTGTTGGAAGAGCATCGTAACACTCATACCGGAAACAGGCCTTACGTTTGTCAAATTTGTAAAAAAGATTTTGCTTCTAAGTACACGTTCAAAGCTCATGAAAAAACTCACGAGATTCGACCGCGGCCATTCGAATGCAAGGAGTGTAATAAAACTTTTTTGAGCCAGCAAAATCTTACTCAACATGAACGGACCCACTTGGGCATCAAAGAATTTGTCTGCCAACACTGTGGTAAAGCTTTTGGCTCCCAACACAACCTAGAAGTCCACAATATTGTGCACACTGGTCACAAGCCCTATGTCTGCGACCAGTGTGGTAAAGCGTTTGCCAGGAAAGCCGAGATAAGAGACCACGAAAGAACACACACTGGAGAAAAACCTTATCAGTGTGAGTTTTGCGGTGCGACTTTTAGTCAACGCTCCAATTTGCAGTCCCACAAGCGCGCCACTCACTACAATGATAAGCGTTACAAGTGCGATGATTGTGGAAAAGGTTTCAAGCGAAGAAGATTATTGGACTATCACATTAAAGCTCAGCATACCGGTGAAAGACCGTTCAAGTGTGAAACTTGTTCAGCGACATTTGTTTACCCAGAACACTTTAAAAAACACATGCGTATCCACACCGGAGAGAAGCCATATCTTTGCGAAGTATGCGGAAAAGCTTTTAACAGTCGCGATAATCGTAACTCGCATCGTTTCATTCACAGCGATAAAAAACCTTACGAGTGTTTGGTTTGCGGAATGGGATTCATGAGAAAACCACTTCTGTATACTCATATGCAGAACTTGGGACATCTAAATGATACTATTGTTGTTAATCAACCGAGATTAACTACTACTGAAGAACGAGTTATAACTATTCCTGAAGGGACTCAGTTATTGATTGACGGCGAACAAGAAGAACATATGGAAGATACTGAATTATATGTAACAGATTTAAAAGATCATGTTATTATTCAAGAAGATGAAAATATTTATCAACATGAAGATGGTCTTGACATTCCTTCAGATGAAAATATTGCTGCAGATCAAATTGAACATATTGTAGTTAATAATCAGATTGCATTTGCTGACGGCAGTATGATTGAATGTAAAACAGAAGACGCTGAAGAAGATGCAGAGATGTATAGTTACACTGACGACGGCGAAACAATGGTTGTACCTGCTAGTGAATACAAAAACCTTATCGGCAACAGCAAAGGTCCGGTGCGATTAGTCCAGATGAGAATTTTGAACCCCGGAAGTGATGGCAAAAGCTATGTCAGCCTTGTCCAGCAGGACTCATAA
Protein Sequence: MTESVKEMLYCLICNIKFSTSTRNSIKIFDKNSLCDSQKTLLSALNLVLETEVTEDNVHSDVICKKCFKLFNEKFEIKAEIKNDIFENYRKTVKKLTDIVEEEYNDHDYVDHENHVLEEFSPHAIDEESNKTKDLLLAKEEHVDIEYLQEDDSENIINEEYIDDPGPAKIILVKAEQTKNKEVSKRGRSARGEDEPLLYRDKNTNTYTCLLCPDDDQIAGDTREIVAHLKASHDIRLYVCDMCGAEFKKRNELSSHMDEHIAKEDGDFQCEYCNRIFSNLRLFRIHKRVHYPQAKSWTCDQCGKKYSSKNLLEEHRNTHTGNRPYVCQICKKDFASKYTFKAHEKTHEIRPRPFECKECNKTFLSQQNLTQHERTHLGIKEFVCQHCGKAFGSQHNLEVHNIVHTGHKPYVCDQCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAQHTGERPFKCETCSATFVYPEHFKKHMRIHTGEKPYLCEVCGKAFNSRDNRNSHRFIHSDKKPYECLVCGMGFMRKPLLYTHMQNLGHLNDTIVVNQPRLTTTEERVITIPEGTQLLIDGEQEEHMEDTELYVTDLKDHVIIQEDENIYQHEDGLDIPSDENIAADQIEHIVVNNQIAFADGSMIECKTEDAEEDAEMYSYTDDGETMVVPASEYKNLIGNSKGPVRLVQMRILNPGSDGKSYVSLVQQDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382089;
90% Identity: iTF_00379069; iTF_00380543;
80% Identity: -