Cglo011490.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- tfip11_1
- Assembly
- None
- Location
- Contig5745:25014-27964[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-89 1.2e-85 287.8 10.5 1 275 377 644 377 644 0.97 2 2 0.019 2.2e+02 1.6 0.0 157 190 656 688 649 702 0.53
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAAATGAATTTCACTCCAATCGGCCCAGGAGAAAATTTACAAAGGAGCAACAAATGCTTGGAATGTGGGCAGATGACAGTGAAGAAGAGGAAGCCCCATCAAGAGATCCTCCAAGAGGATTTAATAAAGGACCTAAGAATTACACAGCCCCGGTTAGTTTCGTAGCTGGAGGAATCCAACAAGCGGGAAAGTCCAAAGATAAAGACAAAAAAAAGGAGAAAGACAAGAATGATGACGAAGATGACGAGGATCAGGATGTGTCAAACACGTCCAGTGATTCCGAGAAAGAAGAAGCACCCTCGAGGCCATCATTTTCTATGAATGCCGAAGCAGTAGGTGGAATCGCCGGGCTCAGGAAGAAACGTGCTCCAGTTAATCCCTCACTGATGAGAATTGGAGTTGGAAACTGGGAAGTGCACACCAAGGGGATTGGAGCGAAGCTGCTGCTCCAAATGGGCTTCGAGCCCGGTAAAGGTTTGGGAAAATCCCTCCAGGGTATAAGCGCTCCCGTGGAAGCTCAAGTAAGACGTGGACGTGGTGCGATTGGTGCCTACGGTCCTGAGAAGCTCGCCAAGGTTCCGCAGGAAAAAAAAGACGAGGATGTTGAGAAGACCAAGGAGTTCAAAGCCAAGCTGTCGCAGTGGCGCAAGACTGATGGAGTCACGAAGAAGAAGACCAAGTACTCGTACAAAAGCGTCGATCAAGTTCTCGAGGATGGGAAGCTCAGGCCGAATGTCAAGAATTCCACCAGTGACATGAGTCGTGTCAAAGTCATCGACATGACGGGTCCAGAACAGAGGGTACTCAGCGGGTACCATGCCATAGCCGGTCAACACCGGCCTGATGATTCTGCTGCTGAATTTGACAAAAAATCTCTGACTAATTTCGCACTTCCAGAACTCCAGCATAATTTGAACTTGATCGTCGACATGTGTGAGCAAAATATAATCCAAAATGACAGAAAAACTCGGTATCTAAGCGACAGAGTGGTGGCTCTCGAAGCCGAGCAGAAGAACATGGAGAATGTTATCGAGCAACATGATCAGCTGATCAATACTCTTGACACCGTCGTGAAAATTATTGACAATTTGATGATCAATAACAATGATATGAGTCTCGATGAGACTGCTGAAGCTTTCAGAAAACTACAGGACCAGTATTATAATGACTACAAGACGTACGAGCTCGGGGAGCTGGCCAGCAGTCTCGTCACTCCGAAACTAGCAAGCTCGATGGCGAGGTGGAATCCTCTGGCGGAACCAATGCATCACCTCGACTCGGTAAGGCAGTGGAAAGACATCCTGAGCATCGGAAACAACCTGATAGAAGCCAGAACATCAACCACGCCGTATGATCAGCTGATTTGGAACGCCTGGATGCCTCCAGTTCGCAGAGCTATTGAGCAGTGGGCTTGTCGACAGCCAGACCCGTTGATTGAGCTCTTCGAGAACTGGATGCCCTTCATCCCCAAGTTCATCATGGACGGCTTGGCGATGACAGTCCTGCAGAAACTTACTGCTGAGGTGACTGAGTGGGATCCAAGGACTGACACAGTCCCCATTCACATGTGGATCCACCCATGGCTGCCCTTGTTGGGAGATAACATGAATACTGAGATTTACCCGACAATCAGACGAAAACTCGGCTCTGCGCTGGGAAGCTGGCATCCGTCAGACAGAACCGCGAGACTCATGTTGGAGCCTTGGTCTCAGGTCTTTCCCAAAGGTGATATGGAGGCTTTCCTCATCAAAAACATCATGCCAAAACTGGAAATCACAATGTCTGAGTTTATTATTAATCCACTCTCCCAGCATCTGGACAACTGGAACTGGGTCTACGACTGGGTGGGCTTGCTGCCAGTTCATACGATGGCTGGACTGCTGAACAAGTGTTTCTTTCCCAAATGGCTTCACGTTTTGGCAGCTTGGCTCAATCATTCGCCTAATTACGACCAGATCACCCAGTGGTACCTCGGCTGGAAGAAGATGCTCAATGACAAGCTTCTGGCCGAGCCTGTTATCAAGGACAACTTCAAGAAAGCCCTGGATATGATGAATCGTGCTGTTTCTAATACTCAGGGACTTCAGCCAGGCTCTGCTGAGTATGTTTCCTACCTGATGAGTCTTGAAAGGACCCAGCCAGCTCCTCAGATTCCGGCTTCAGCTCAACCCCGAATTGATAGACTCGCAGAAGCTGTACGGACTGCCTCGCAAATTCCTCAAGGCTTCAAGGATCTTGTGCAGAAAAGATGCGCTGAACGAGATATTGTCTTTATGCCTTTGGCGAATCGATATCGCGAGGCTAAGCAAGTATATAAAGTTGGAAATGTCCAGGCTTACATTGACGGTAATGTCCTTTTCGTTAACCAGAAGGCGTCTAATTGGGTACCAACTTCCCTCAATGCCTTGTTGGACATGGCCGAGTTGTGA
- Protein Sequence
- MSDDENEFHSNRPRRKFTKEQQMLGMWADDSEEEEAPSRDPPRGFNKGPKNYTAPVSFVAGGIQQAGKSKDKDKKKEKDKNDDEDDEDQDVSNTSSDSEKEEAPSRPSFSMNAEAVGGIAGLRKKRAPVNPSLMRIGVGNWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAQVRRGRGAIGAYGPEKLAKVPQEKKDEDVEKTKEFKAKLSQWRKTDGVTKKKTKYSYKSVDQVLEDGKLRPNVKNSTSDMSRVKVIDMTGPEQRVLSGYHAIAGQHRPDDSAAEFDKKSLTNFALPELQHNLNLIVDMCEQNIIQNDRKTRYLSDRVVALEAEQKNMENVIEQHDQLINTLDTVVKIIDNLMINNNDMSLDETAEAFRKLQDQYYNDYKTYELGELASSLVTPKLASSMARWNPLAEPMHHLDSVRQWKDILSIGNNLIEARTSTTPYDQLIWNAWMPPVRRAIEQWACRQPDPLIELFENWMPFIPKFIMDGLAMTVLQKLTAEVTEWDPRTDTVPIHMWIHPWLPLLGDNMNTEIYPTIRRKLGSALGSWHPSDRTARLMLEPWSQVFPKGDMEAFLIKNIMPKLEITMSEFIINPLSQHLDNWNWVYDWVGLLPVHTMAGLLNKCFFPKWLHVLAAWLNHSPNYDQITQWYLGWKKMLNDKLLAEPVIKDNFKKALDMMNRAVSNTQGLQPGSAEYVSYLMSLERTQPAPQIPASAQPRIDRLAEAVRTASQIPQGFKDLVQKRCAERDIVFMPLANRYREAKQVYKVGNVQAYIDGNVLFVNQKASNWVPTSLNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006060;
- 90% Identity
- iTF_00379613;
- 80% Identity
- -