Basic Information

Gene Symbol
Bgb
Assembly
None
Location
Contig96384:179-1696[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.6e-49 1.3e-44 152.1 0.1 1 97 40 133 40 143 0.95

Sequence Information

Coding Sequence
ATGATGATGCACGCGATGAGTGAACATGCTGGAGGTGTTGGAGGCCTTGGTGTAGGTGTGTTACCTTTTGACGGAATGGGTTTATATGAACAACCGCGTCCAAAATTCGTTTTTAAGATGCCAAGAGTTGTACCTGACCAAAAGGCTAAATTTGAAAGCGATGAGTTGTTCAGACGACTGAGCCGTGAATGCGAGATAAGATATACAGGATTTAGAGACAGACCTCTCGAGGAACGTCAAGGCCGCTTTCAAAATGGGTGTCGAGAGGGTCATACAGAAATTGCGTTTGCTGCGATGGGAACAAATCTTCAACTGACTTTCGGCCCTTCCACAGGAAATTATTCTAACGAACCGAGTACATGTGATTTCGACAAGGAACACGGAAAGGTATTTTTGGCTTTAATCAGCTTTAAATTTTTCTTGGAAAATAATTATAATTTATTTACATACATACTGTGA
Protein Sequence
MMMHAMSEHAGGVGGLGVGVLPFDGMGLYEQPRPKFVFKMPRVVPDQKAKFESDELFRRLSRECEIRYTGFRDRPLEERQGRFQNGCREGHTEIAFAAMGTNLQLTFGPSTGNYSNEPSTCDFDKEHGKVFLALISFKFFLENNYNLFTYIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01272858;
80% Identity
iTF_00380841;