Cfla012010.1
Basic Information
- Insect
- Cotesia flavipes
- Gene Symbol
- LRRFIP2
- Assembly
- None
- Location
- scaffold:22260-24783[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-90 6.2e-86 288.3 39.5 3 300 34 310 31 310 0.92 2 2 0.031 5.5e+02 -0.4 6.5 193 238 340 384 326 385 0.61
Sequence Information
- Coding Sequence
- ATGAATACAATGGAGTCAGCAATAACTGGTCGAAGGCGTGCTGCTAGTCGGCATTCTGCTGAGGATCAAGCTCTCGATCAAATAGCAAAAGAGGCTGGAGAAAGATTAGCAGCACGAAGACAAGCCAGGGCCGAAGCGCGAGAAATCCGAATGAGAGAATTAGAAAAACAGCAAAAAGAAGCTGAACAAACCGCTGATCGTGTTTACGATATGTGTAATGCTGACGGAACAAGAACTTTGAGGGTAACACCAGATCCTATAAGGGCTTCACGTTTATTAACAAATTCAAATAATTTTCAGTCAAAGCTTAAAGAGCTTGAAGAAAAATTTAGAAAAGCAATGATTGCTAATGCTCAACTGGATAATGAAAAATCGTCTTACGTTTATCAAGTGGATTTACTTAAAGATCAATTAGAAGAATCGGAAGAATCGGCCGCTACATTGCGACGAGAGCTCAGGGAAAAAACTAGTGAGGCTAAATTATTGCAACGTGATTGCCAACGGTTGAAAGAGGATTTTGAAATGTGTAAAACATTATTGGAGGAACGAGATAGGCTTATAGAAGAAAATGGATTGGTAATTATTGAAGATGAGGTCAGTGATGACGAAGAAGCAGAAACAACTAATGGATTTGTGAATCGTAAAAAAAAAGTACTAGTCAGTACAGAAGCTGCTGAATTGTTACAAAATGCTGGTGAAGGATCTCTAGATGTTCGGTTGAAAAAGTTTGGAGCAGAGAAAAAAGAATTACAAGATGAAATCCGACATCTAAGACTAGAATTGGAAGAAGCCAAGAGTCGATTAAGATCTGAAAGATCGTCTGGATCAGTATTAGGATTATTAGACTCAGAAGACGTCCAAAGGGAAGCAAATAAATTGTTGGCAGATTACAAATTCAAGTTACAAAAAGCCGAACAAGATATGTCGACGTTACAAGCAACTGTTGCGAGATTAGAGAGTCAAGTTATTCGTTACAAGTCAGCGGCCGAAACTTCTGAGAAAGCCGAAGACGACTTGAAGGTTGAGAAGCGGAAATTACAGAGAGAAGTAAGAGAATCACAGAGTCGTGTTGAAGAGTTAGAAACAACAAATTCGCATTTACAAAGACGATTAGATAAATTGATAAAAGCAAAATCGGCTCTTTTGAAAGAGCTCTGA
- Protein Sequence
- MNTMESAITGRRRAASRHSAEDQALDQIAKEAGERLAARRQARAEAREIRMRELEKQQKEAEQTADRVYDMCNADGTRTLRVTPDPIRASRLLTNSNNFQSKLKELEEKFRKAMIANAQLDNEKSSYVYQVDLLKDQLEESEESAATLRRELREKTSEAKLLQRDCQRLKEDFEMCKTLLEERDRLIEENGLVIIEDEVSDDEEAETTNGFVNRKKKVLVSTEAAELLQNAGEGSLDVRLKKFGAEKKELQDEIRHLRLELEEAKSRLRSERSSGSVLGLLDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAETSEKAEDDLKVEKRKLQREVRESQSRVEELETTNSHLQRRLDKLIKAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01003522;
- 80% Identity
- -