Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:1516092-1521213[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.23 27 6.2 0.3 6 21 12 27 6 28 0.85

2 14 0.013 1.5 10.1 0.0 2 21 34 53 33 54 0.92

3 14 0.93 1.1e+02 4.2 0.3 1 12 220 231 220 240 0.87

4 14 0.066 7.9 7.8 2.4 1 19 341 359 341 361 0.95

5 14 2.1e-05 0.0026 18.8 0.6 2 23 367 388 366 388 0.98

6 14 0.00069 0.082 14.1 2.9 1 23 399 421 399 421 0.98

7 14 0.014 1.6 10.0 0.3 1 23 440 461 440 461 0.93

8 14 0.0023 0.27 12.4 0.0 2 23 467 488 466 488 0.95

9 14 5.8e-05 0.007 17.5 5.2 1 23 524 546 524 546 0.99

10 14 2.9e-06 0.00035 21.5 4.3 1 23 552 574 552 574 0.98

11 14 0.0032 0.38 12.0 7.8 1 23 580 602 580 602 0.98

12 14 8.6e-06 0.001 20.1 1.8 1 23 608 630 608 630 0.98

13 14 0.00068 0.081 14.1 0.3 1 23 634 656 634 656 0.98

14 14 3.5e-05 0.0042 18.2 0.9 1 23 664 686 664 686 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.23	27	6.2	0.3	6	21	12	27	6	28	0.85
2	14	0.013	1.5	10.1	0.0	2	21	34	53	33	54	0.92
3	14	0.93	1.1e+02	4.2	0.3	1	12	220	231	220	240	0.87
4	14	0.066	7.9	7.8	2.4	1	19	341	359	341	361	0.95
5	14	2.1e-05	0.0026	18.8	0.6	2	23	367	388	366	388	0.98
6	14	0.00069	0.082	14.1	2.9	1	23	399	421	399	421	0.98
7	14	0.014	1.6	10.0	0.3	1	23	440	461	440	461	0.93
8	14	0.0023	0.27	12.4	0.0	2	23	467	488	466	488	0.95
9	14	5.8e-05	0.007	17.5	5.2	1	23	524	546	524	546	0.99
10	14	2.9e-06	0.00035	21.5	4.3	1	23	552	574	552	574	0.98
11	14	0.0032	0.38	12.0	7.8	1	23	580	602	580	602	0.98
12	14	8.6e-06	0.001	20.1	1.8	1	23	608	630	608	630	0.98
13	14	0.00068	0.081	14.1	0.3	1	23	634	656	634	656	0.98
14	14	3.5e-05	0.0042	18.2	0.9	1	23	664	686	664	686	0.99

Sequence Information

Coding Sequence: ATGGGACCTCCGATGATTATGTGTCCGATGTGCTGCAACGAGACGTTTGATAATTTGCAGTCACTGAGAGAACATTTGCTGAGTATGACTAATAATTTATACTGCCCAGGATGCTCTCAGAGGTACGACACCATGGATGATCTTATTCAGCACCTGGAAAAGTGCACTGATGATGATAGTCATCAAAAAAGCGATGACAGTATGTCAATTCAAACGGACTGTCGCAATTTAAAAGAAGACAGGAATGAAATTCTTATGGACACCAATGTTGAAGAAATAAATTTTTTAAATCCAGTTAACAACCAACAGATGCTGATATCTGACGCGCGAACTTTAGAAGTTGATGAAAATGGAGACATAAAAGTTGTGGAGCCATTGGACGTAGCAAAAAAACAGCTCAAATTAGATAATGTCCAAGAAGCAGACAAAGATTCTCCTGTGATAAGTATTCCCGAGGATTTAAACACTCAAAATAATGATGAGAATGTTTTAACGATGTTGCCCGAGGACTCTGTTGAGTTTCTTGACTCGGATCAGAGTTTGTTAGAAATCCAGCATCAAGATGGTGAATTGAATGATGATGAATTTATGAAGGTCAAGCAAGAGTTGTGTGAGGTAAAAATCGAGAAGGAAGAAGAGATAGACTCATCAACTATCTACAACTGCAGCAGCTGTGGAATAAGCTTTAACTCCGTGATCGACCACATAAAAGAATACCACGAGGGCCAAGACGTGATCGTGGAGGTGAATGGTGACGGGACAACAGAAGAAGCGACTGAGAGCCCGCCAATAAAAGTCGAGGAAAAACCTCAGCGAGTACACCCGCGGCAGAAGATGAACATCTTGAGGTCCGAGCCTACAGTCGACTCTGAAGGCCGCGCATTTGTGCGGAACGTTGTCCAGATCGAGGACTTCTGGGACAAGAAGGTTAAACCTGTGAACGCTAAGATGATTGAAAAGTTTTTCGCGAATCCCGAAGCCCCGAAGCTTCCGAGGAAAAATGAAATTCCCCAGAGGATGTACAAGTGCAAGCAGTGCCTGGAACAATTTTCCAAGCTCGCGGATTTCCGGAACCATGCTTGCTGCAACGGATCCAATCAGTGCGACCACTGTGACCAGGCTTTCGCTACTGTTAAAGCACTCCAGTTGCATATGAAAGTCCACGGTGCCTGTCTGTCGCCTACTAAGAAGAACTTTGTCTGCAGGACATGTGGGACGCAGTTCGCGTCCCATAAAAGTCTCAGGCTTCACTCCAGGATGCACGCGCCTGTTAAGGCTAGACCTGTTGACGCTCCTGAAGGGAAACCTTCTACTCGCTTTACTTGTCAGGAGTGTGGTAAAACATTGTCAGAGTCATATCGAGCTGCTCACATGTCCCTTCACGCTGGAGACACTGTAACTTGCGCTGTTTGCAATCGGAAATTCGACTCGGCAGATAGTTTAGCTATGCATGCAGCAGTTCACCCTGAGCTGGGCGTCCAGGTGCCAGCGAATCAGTCAGAAGTTTCCGAGCAACAGTCGCCTCTTGGAGAAGCTGCGACGGAAGACGATCTTGATCAAACCAAGCCGTACAAATGTCAGCACTGCGGAAGGAGATTCACTAGGCCGCACGAGAAAGTAAAGCATGAGCGGATACATACTGGGGAAAAGCCGCATGTCTGTGAGGTCTGCGGAAAAAAATTCCGAGTATCATACTGTTTAACTCTGCACATGCGAACCCACACCGGAGTCCGTCCGTACGAGTGCCAGCACTGTCACAAGCGTTTCAAAGCCTCCTCGGTGTACAATCACCACCTGCTGACCCACGGCGAGGAGCGGGCGTACACTTGCCCTCACTGCCCCAAGAACTTCAAAACCCGCGTCCAATTAGCCGGTCACAAAAATAGTCACACGAAACCTTTCCATTGCACGGAGTGCACGCGACCTTTCGCTTCTCTTTACGCAGCCAGAGCCCACATTGCTACGCACAAAAAGGAGAATAATCTAAAATTCACCTGCCACTTGTGCGGAGCTTCTTACGGGCGTGCTTTTGCTCTTAAAGATCATCTTAAAACCCACAAGGAAGAGACCGATGAAGCTTTACCACCTGAGCCAGCTCACGAGGAAGAAATTAATCAAGATTTTTTACTTGAAGAAGATGAAATGATTGAAGAAATTTTAGATAGTTAA
Protein Sequence: MGPPMIMCPMCCNETFDNLQSLREHLLSMTNNLYCPGCSQRYDTMDDLIQHLEKCTDDDSHQKSDDSMSIQTDCRNLKEDRNEILMDTNVEEINFLNPVNNQQMLISDARTLEVDENGDIKVVEPLDVAKKQLKLDNVQEADKDSPVISIPEDLNTQNNDENVLTMLPEDSVEFLDSDQSLLEIQHQDGELNDDEFMKVKQELCEVKIEKEEEIDSSTIYNCSSCGISFNSVIDHIKEYHEGQDVIVEVNGDGTTEEATESPPIKVEEKPQRVHPRQKMNILRSEPTVDSEGRAFVRNVVQIEDFWDKKVKPVNAKMIEKFFANPEAPKLPRKNEIPQRMYKCKQCLEQFSKLADFRNHACCNGSNQCDHCDQAFATVKALQLHMKVHGACLSPTKKNFVCRTCGTQFASHKSLRLHSRMHAPVKARPVDAPEGKPSTRFTCQECGKTLSESYRAAHMSLHAGDTVTCAVCNRKFDSADSLAMHAAVHPELGVQVPANQSEVSEQQSPLGEAATEDDLDQTKPYKCQHCGRRFTRPHEKVKHERIHTGEKPHVCEVCGKKFRVSYCLTLHMRTHTGVRPYECQHCHKRFKASSVYNHHLLTHGEERAYTCPHCPKNFKTRVQLAGHKNSHTKPFHCTECTRPFASLYAARAHIATHKKENNLKFTCHLCGASYGRAFALKDHLKTHKEETDEALPPEPAHEEEINQDFLLEEDEMIEEILDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379856;
90% Identity: iTF_00379856;
80% Identity: -