Ccon013811.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cotesia congregata
Gene Symbol
Hr39
Assembly
None
Location
contig:2037899-2045884[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.7 2.5e+04 -5.1 7.8 82 163 198 276 135 303 0.62
2 4 2 2.9e+04 -9.0 12.2 76 159 302 386 283 418 0.39
3 4 3.5e-08 0.00052 20.2 0.0 1 21 485 505 485 509 0.92
4 4 1.7e-70 2.5e-66 225.5 0.0 197 408 660 869 643 869 0.93

Sequence Information

Coding Sequence
ATGTCAGAGCAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCACCTGCCCAGTCCTGGAAGTCCAGCTCGGGAACCACCGCCTCCTCGCGAACCATCGACGCGGGGAAAAATGTCTCTGTTACGACTATCAATGTTCCACCTGTTGAAGAGATGCATGATGGCAAAAGCGTAAAATACCTAACCGGGCAGAACGGCGTGACAGTGTCAGTAGTATCTTCCTGCAGCAGCTCGAGCCCCCTGGAGGCCCCGATCGACGACGGGGACAGTGACGGAGAAGTCAGCAAGATCGACTTCCGCGGTGTGAATCTTCGAACGAAAAAAAAGCGCGATGAGTCAGAGTGTCCGAGCGTGGAGTCCCACCAGCAGCCGGAACGACCGATGTCCTGGGAGGGCGAGCTCTCCGACCAAGAAATGTCTTCCAATACCCTGACGAACCCCGAGGAGACCTCCATGGAGGGAGTCCAGGTCTGTGGCGCTAGTCCAGGTCCTCAGGAGCAAAAGTTCCCCATAAAACCCGAACCAGACTTCAGGTCCAGTCCCGGCCTGATCGGGCACGTCGACGCAGCCATGCCTTTGCACGGCCAGCACCACCATCATCAGCAGCAGCATCCCCAGTTGGAGCAAGCTCAGCAAAGTGACTTACCTCTTCTAGTGGGGAAACTCCTCGGCGGGTACTCCTCCACGCCCAATCACAGTCCAGTTTTAAACCCGCGACACCACCTCACTAAGCACAGTCACACCAGGTCCCAAGTTCCGTCCCCAGACTCTGCTATTCATTCTGCCTACAGCGTCTTCAGCTCCCCGACCCAGAGTCCTCATGCGGCAAGACACTCGGCTCTTGGAGCAGGCAGTCCAGTTCCTTCTTCCTCGTTGTCGCTGTCCAGACACAGCTTCAACAATTCTACGTCTTCGCTGTCGTTGTCTTTGTCACACTCGCTATCCAGGAACAACTCCGACGCTTCCAGTAGCTGTTATAGTTATGGGTCCCTGAGTCCTCCCACGCATTCTCCTGTTCAGCAGCCAAGACACCACCACCACCACCAGCATCAACATCAACATCAACATCATCATCAGGTACCTCAAGGAAGTCCGCTGCACCTAGCCTCAAGCGCGCACCACTTAAACTACTCCAACATCTCAGAACTGGGTTCCGAAACCCATTCTGAAGTCGAGCAGGAAGACTGCAAAATCCCTTCAGCACCCGCCGGAATCTCTACAAGACAACAATTAATCAACAGCCCATGCCCAATCTGCGGGGACAAAATCAGCGGTTTTCACTACGGAATTTTTTCCTGCGAGTCTTGCAAAGGGTTCTTCAAGCGAACCGTGCAAAACAGGAAGAACTACGTCTGCCTCAGAGGCGCAGGTTGTCCTGTAACAGTAGCGACCAGGAAGAAGTGTCCAGCTTGCAGGTTCGACAAGTGTCTGAACATGGGGATGAAGTTGGAAGCGATTCGCGAGGACAGAACTCGCGGTGGCAGAAGCACTTACCAGTGTACGTACACTTTACCGGCAAATTTAATCGGCGCAGTTCCTGGTGACAAAATAACTGGAGGGAGTTGCGGGAGTCCGGCGCCTCCTGAGCACCATCATTCCACTCGGCACCACTGGAACCACTCCCACAAGATTCAGGTGGTGCCTCAGCTGCTTCAGGACATCATGGACGTCGAGCATCTCTGGCACTACAACGACAACGACAGAGTTAGTCAGGCTGCCAACGGAGCTAATCCTGACTCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAGCTCCGTAGGACCGACGAATCACGAGCAGCTGAGCTCGTCGAGCAACGAAAATTCATCACCGAATGGCGGTACAGGGAGCCAGCACCCGGACCCTCTGTCGAACCTGTGCAATATAGCGGACCATCGACTGTATAAAATAGTTAAATGGTGCAAAAGTCTTCCGTTGTTTAAGAATATTTCAATCGACGATCAGATTTGCCTGCTGATAAATTCCTGGTGCGAATTATTGCTCTTCTCATGCTGCTTTAGAAGCATGGGCACCCCGGGGGAGATCCGGGTGTCGCTCGGGAAGTCGATCACCCTGGAGCAAGCCCGGCAATTGGGGTTGGCGACCTGCATCGAGCGAATGCTGGCATTCACCAACAATCTCAGGAGATTGCGTGTCGATCAGTACGAGTACGTCGCGATGAAGGTGATTGTCCTGCTTACGTCAGACACCAGCGAGCTCAAGGAGCCGGAAAAGGTGAGAGCTTCCCAAGAAAAGGCGCTACAAGCCCTTCAGCAGTATACTATTGCAAGGTATCCCGAGATGCCGGCTAAGTTTGGGGAGTTGTTGCTGAGGATACCGGATCTCCAGAGGACCTGCCAGGTTGGCAAGGAACTGCTTAGTCAGAAACGCGCTGAGGGAGAGGGCAGCTCATTTAATTTACTTATGGAACTGCTGCGTGGCGATCATTGA
Protein Sequence
MSEQNGPTEGPGWWPPAQSWKSSSGTTASSRTIDAGKNVSVTTINVPPVEEMHDGKSVKYLTGQNGVTVSVVSSCSSSSPLEAPIDDGDSDGEVSKIDFRGVNLRTKKKRDESECPSVESHQQPERPMSWEGELSDQEMSSNTLTNPEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLIGHVDAAMPLHGQHHHHQQQHPQLEQAQQSDLPLLVGKLLGGYSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHHHHHQHQHQHQHHHQVPQGSPLHLASSAHHLNYSNISELGSETHSEVEQEDCKIPSAPAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGAVPGDKITGGSCGSPAPPEHHHSTRHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSQAANGANPDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSVGPTNHEQLSSSSNENSSPNGGTGSQHPDPLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMGTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSQKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00380386;
90% Identity
iTF_00380386;
80% Identity
iTF_00378866;