Ccon012599.1
Basic Information
- Insect
- Cotesia congregata
- Gene Symbol
- SUB1
- Assembly
- None
- Location
- contig:7086870-7088673[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.7 2e+04 -4.2 0.6 30 37 64 71 63 71 0.80 2 3 0.64 1.9e+04 -4.0 1.6 28 37 81 91 79 91 0.75 3 3 1.8e-26 5.3e-22 77.8 0.2 1 52 104 157 104 157 0.97
Sequence Information
- Coding Sequence
- ATGTTAATTCATTTTTGCAACTCAGTAAAGTCTCTTTACTTATCGCGTTGCTTTTGTAGTACCACGATATTATTCAGTAATAAGTATAAAGATTTTTGGAAGGAGGAACTTTCTTTAAATATTTTCAACATGCCTAAAAAATCAAGAGAGTATGTTTCAAGCGACGAAAGTGAATCTGGAAGTCATTCCGAGGAAGAGAAACCAAAAAAGAAGCCAAAGCGCGAAGAAAAAAAGTCCAAAAAGGAAGAGAAAGAGGACAAGCCTGCTAAAAAAGCATCTTCCAGCAAGGTCGACGACGAGGAGCCAACCTGGAGCATTGGTAACAAGAGACAGGTCACTGTACGTACATTCAAGGGAAAATTGTACATTGACATTCGTGAGATGTATTTAGATGCCAACAGCGGTGATCTTAAGCCTGGTCGCAAAGGAATTTCTTTGACTCCTGAGAACTACAACAAGCTGAAAGATATATTAGAAGAGGTTGATGAAGCAGTTGCTCGCAAAGCATAA
- Protein Sequence
- MLIHFCNSVKSLYLSRCFCSTTILFSNKYKDFWKEELSLNIFNMPKKSREYVSSDESESGSHSEEEKPKKKPKREEKKSKKEEKEDKPAKKASSSKVDDEEPTWSIGNKRQVTVRTFKGKLYIDIREMYLDANSGDLKPGRKGISLTPENYNKLKDILEEVDEAVARKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380294;
- 90% Identity
- -
- 80% Identity
- -