Ccon024480.1
Basic Information
- Insect
- Cotesia congregata
- Gene Symbol
- -
- Assembly
- None
- Location
- contig:22704082-22713724[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 0.0048 16.9 3.3 16 90 72 147 35 217 0.80 2 2 3.4e-07 0.01 15.9 0.1 341 381 314 354 294 364 0.80
Sequence Information
- Coding Sequence
- ATGTTGGTGGTAATATGCACGAGTGACGTTACAACTGTGTCAGTATGTCAGTGTCGAACCCGACCTGAGTCTATGCTTGTCGATCTCATGATCACTCGATCGTACAGCGTGGACCGGGACCGGCTTCGAGAGCGTGAGCGGCAGGCACGCGCGGCGATGTCGGTCCAGGCGGAACAGGCAGCGGCAGTTGGAGGTCCAGAGACCCGGCACCCTCACAATCAGGGCCATCATTCCGTTAATTCCCACGTGACTTCATCAGCCGCGCTCTTTCGAGCCCCTGTCAAGGTGAGTCCAGACGCGCAAGACCGAACAACACAGCAGATTCAATCCAAGCTCGGCAACTACTCCCTGGTGAAGCATCTGCTGGACGAGCCAAAGAGACTGATAGGAATTGAAGGGGTACCAGCTAGTCCAGCGCCGGCGTTGAGCGCATCCACACGGCTGTCTTCGAGTAACAATTGCAGGAGTTCGCCGTCTTCCCAAGAATTTAAAAAACCCGGTGGTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCATCCTCTAACTCGGCAAATTTGAGCCATACCTCCCAACGCGGTGGTTTTATAAAACCCGCGGATGGGAAACCACCTTACGGCGGTCGGGGTGGCTACCCAGGACAACCGGTTAAACACGGTGGTAGTAGCAACGATCACAGGAGCCACGGTATCCTTCCCGCAAAGGGTCCACCTTCGTCAATCGCAAATGCCAATTCGAGCGGAAACAGCGGTGGTCTAACCTCTTCCGGAAGTAATTGTCCTCCTGCCCCCGGTAATTCCGGTAATTTGGGCAGAATTCACACAGCTGCTTCCAGACTCCCAAGGTTACCTCTTGACAACGGAGTAAGACATGGATCCGATCCAGCGGATTTGGAAAACATCCTCAAGGAAATGACGATGCCGCCCATACCACTTTCAGCAATTGCACAGACACCAAGAAAAGAACCGGAATCCAAGTTCGAATTCAACCCTGTACTGGCCAAGTTAACGGAGAAACCATCTGAACCTGTCAAGCCACCACGTAAGTTATAA
- Protein Sequence
- MLVVICTSDVTTVSVCQCRTRPESMLVDLMITRSYSVDRDRLRERERQARAAMSVQAEQAAAVGGPETRHPHNQGHHSVNSHVTSSAALFRAPVKVSPDAQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPALSASTRLSSSNNCRSSPSSQEFKKPGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASSNSANLSHTSQRGGFIKPADGKPPYGGRGGYPGQPVKHGGSSNDHRSHGILPAKGPPSSIANANSSGNSGGLTSSGSNCPPAPGNSGNLGRIHTAASRLPRLPLDNGVRHGSDPADLENILKEMTMPPIPLSAIAQTPRKEPESKFEFNPVLAKLTEKPSEPVKPPRKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -