Ccon001169.1
Basic Information
- Insect
- Cotesia congregata
- Gene Symbol
- -
- Assembly
- None
- Location
- contig:6783589-6787407[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-11 9.6e-08 32.3 0.0 2 35 40 74 39 81 0.91
Sequence Information
- Coding Sequence
- ATGACTAATTTTCAGGCCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGCGCCTCCACCTCCAATATATCAGCCGACTATTCGAGCCTGCTGAAGCTGAAGGCGCCGACGTGGACGCGACAAGACCTTCAGGACGCAATAGAAGCCGTGGTCACCCAGAAGATGAGATTCACCCAAGCTTCCACGAAATACGGAATACCCAAAGGTACTCTCTACGACAACATACTCGGCAAGTCGAAGAGAATGATGGTGCTCGAAGAAGCTGGACTTGATGCCAATGAAGAGAATGCGGTCCTTGAATTCTGTTGTGACATCACCGTTAGTCCTTACAATAGACGAACCAAAAAATCGTTGAACGCTATTTTAAATTTCGTTGAAAAATTACGCAGGCGTCGTGATCCAGGTTTTATTTTTACCGGATTGTCGGGGTTCAGGTGGTGGTGGGCGTTCTGTAAAAAACATTCCATTGTTTCGCTTTATTTCAATGATGAAAATGATAACGAGTGA
- Protein Sequence
- MTNFQAKLLESSHAWLGASTSNISADYSSLLKLKAPTWTRQDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDANEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRRRDPGFIFTGLSGFRWWWAFCKKHSIVSLYFNDENDNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969493;
- 90% Identity
- iTF_01213244;
- 80% Identity
- iTF_00379540;