Basic Information

Insect: Cotesia chilonis
Gene Symbol: -
Assembly: None
Location: scaffold12:2838628-2849149[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00013 0.01 15.9 1.4 1 23 108 130 108 130 0.98

2 19 6.2e-05 0.0048 16.9 2.8 3 23 138 158 136 158 0.97

3 19 2.3e-05 0.0018 18.3 1.7 1 23 164 186 164 186 0.98

4 19 3.3e-06 0.00026 21.0 3.5 1 23 192 214 192 214 0.97

5 19 0.00013 0.01 15.9 2.3 1 23 220 242 220 242 0.98

6 19 0.00017 0.013 15.5 0.1 1 23 248 270 248 270 0.96

7 19 0.0069 0.54 10.5 2.3 1 23 276 298 276 298 0.97

8 19 0.00075 0.058 13.5 5.1 1 23 304 326 304 326 0.98

9 19 0.00024 0.019 15.1 0.6 1 23 332 354 332 354 0.98

10 19 0.0044 0.34 11.1 0.3 1 21 378 398 378 399 0.94

11 19 0.00036 0.028 14.5 0.8 1 21 402 422 402 423 0.94

12 19 0.00037 0.028 14.5 1.7 1 23 424 446 424 446 0.98

13 19 7.3e-05 0.0057 16.7 1.4 1 23 452 474 452 474 0.97

14 19 2e-05 0.0015 18.5 0.4 1 23 480 502 480 502 0.98

15 19 0.00014 0.011 15.8 0.9 1 23 508 530 508 530 0.97

16 19 0.0024 0.19 11.9 0.0 2 23 578 599 577 599 0.93

17 19 0.0031 0.24 11.6 3.7 1 23 645 667 645 667 0.98

18 19 2.1e-05 0.0017 18.4 4.1 1 23 678 700 678 700 0.98

19 19 0.00018 0.014 15.5 0.8 1 23 706 728 706 728 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00013	0.01	15.9	1.4	1	23	108	130	108	130	0.98
2	19	6.2e-05	0.0048	16.9	2.8	3	23	138	158	136	158	0.97
3	19	2.3e-05	0.0018	18.3	1.7	1	23	164	186	164	186	0.98
4	19	3.3e-06	0.00026	21.0	3.5	1	23	192	214	192	214	0.97
5	19	0.00013	0.01	15.9	2.3	1	23	220	242	220	242	0.98
6	19	0.00017	0.013	15.5	0.1	1	23	248	270	248	270	0.96
7	19	0.0069	0.54	10.5	2.3	1	23	276	298	276	298	0.97
8	19	0.00075	0.058	13.5	5.1	1	23	304	326	304	326	0.98
9	19	0.00024	0.019	15.1	0.6	1	23	332	354	332	354	0.98
10	19	0.0044	0.34	11.1	0.3	1	21	378	398	378	399	0.94
11	19	0.00036	0.028	14.5	0.8	1	21	402	422	402	423	0.94
12	19	0.00037	0.028	14.5	1.7	1	23	424	446	424	446	0.98
13	19	7.3e-05	0.0057	16.7	1.4	1	23	452	474	452	474	0.97
14	19	2e-05	0.0015	18.5	0.4	1	23	480	502	480	502	0.98
15	19	0.00014	0.011	15.8	0.9	1	23	508	530	508	530	0.97
16	19	0.0024	0.19	11.9	0.0	2	23	578	599	577	599	0.93
17	19	0.0031	0.24	11.6	3.7	1	23	645	667	645	667	0.98
18	19	2.1e-05	0.0017	18.4	4.1	1	23	678	700	678	700	0.98
19	19	0.00018	0.014	15.5	0.8	1	23	706	728	706	728	0.95

Sequence Information

Coding Sequence: ATGTACTTGGAATTTCAAATTGATGAAAATGATTGTCATCCAGAATCTTATTTATTTCAATCCATAGATTTTGTAAAGCAAGAAGAAAATAATTCAATGAGTGAGGAAATTACTATTGTACCTGAGCCCGACGCCGTAAAAACCGACACTACCTTATCAGAAAATTCAATAGCAAAACGTACAAGATCCAAGCGAACTCCAAAATCTTCTCCAAAAACCACAAACCCAAAAAATAAGACTAAAAAAGTAAATCCAAAAAGTATCACCTTAAAATCAAAGAAATTTGCAAAAAGCACTTTGCAAATTGACCCGGCGGAAGTTTACACATGTGAAGTATGTTCCGCGAAATTCCAGCGAAAAGGTAATTTCAATAAACACAAATTAGTCCATACCGGCGAAAAGCCTTATGGATGCGACTTATGCTCGTTGCAATTCAATCAAAACAGTTCTCTGAAGCGACACATGCACACGCACTCGGAGGAGAAGCCTTACGCTTGCAGTATGTGTCCCTGGAAATTCCGACTGAACCATCAGTTGCAATCTCACTTGAACACCCACATGGAAGAGAAGCGCTACACGTGCGATGTCTGTTCCAAAAAATTCCGGCAGAAACACAGCTTGAGAAGACATCTTGGTATCCACTTCAACGAAAGACCTTTTTCTTGCGACATTTGTTTCAGGAGCTTTCGAGAAAAGACTCAAATGAAAATCCACAAGCGAATCCACTCCGGAGAGCAACCCTACGCTTGCGAAATTTGTCCTGCGAAGTTCCGCGTAAGGGGTCTGCTGAACAGACACAGACTAGCTCATGCTGAAGAAAAACCCTATGCTTGCAATTTTTGTCCCGCGACTTTTCACTTGAAGTCTCGGTACAAAACCCACATGCTTATTCATACAGGGGAAAAACCCTACCAATGTGACGTATGTTCCGTTCAGTTCCGGCATAAGTGTTCGTTGAATAAACACACTTTGATTCACACCGGAGAAAAACCTTACACTTGCCAGGTTTGCTTGAAGCAATTTCGCGAGAAAGGGACTCTGGATAAACATATGGTTGTTCATATGGAAGCAAATGATCTCCAAGAAGTTCCAACGGAAGAAACTCCAAAAAATGAATCTATGTGGAAAACATTCAAGTGCGATAAATGCGCAATGGAATTTGTCAATGAAAGTTCTCTAGCAACTCACTCAAAAAAATATAAATTTAACTGCGACGTCTGTCCAAAGTGTTTTATATCAAGACAAGGATTGTGGTACCACCTGAAATCGTTCTCTTGTACCCTGTGTGCCTACAAAACTCGGTACAAAAGTTCCTTGAACAGACACGCTCGTGTTCATACCAGAGAGAAGCCTTTTGCGTGTGACCTCTGTTCCGCGACCTTCCGGGAACAAGGTCACTTGAAGAGACACAGTCGGATTCATACTGGAGAAAAGCGCTACACCTGTGATGTCTGTTCCGCCAAGTTCAGGGAGAAGAGCACCTTGAGGCAGCACATTATTATTCACACTGGGGAAAAACCCTACACTTGTTCTGTTTGTGCGGCTAACTTTAGACAGCAGAATCATCTGGATAGACATATGGTCATCCACAATGGAGAAAAAAGTTATGCTTGTCAAATTTGTTCCTTGGAGTTCCATGGATTGATGACCGGCCAGAAGCACCTGGTAAAGAGAAGATGGAAGCGTCCGCGTAGCCAAAGAATAAAGAAGGATTATTATCCAAAAAATTGGGTTTGTGAAATTTGCTCTGCTAAATTCGCTTTCAAAAGTGGTCTAGCAAGACACGTGGTCTTGCACACGGACGAGCGTCCTTACAGCCACAAAAGGAGCCACCGTCAGCCGAAGCCTTTCATCTGCAAGATTTGTAAGTCCAGACATCATACAGATCTTGGTTTGAGACTACACATGCGGATCCACACTCACAAATTTCCTTTTACTTGCGTAACTTGTTTGATGACTTTTAACAAAAGGTTTCACTTAGTCAATCACATCAAGAGTCATATCGACGAAAAAAATTCTAAGAAAAAAATTTTTACTTGCGAAATTTGCTCCTGGAAATGCAATAGGAAGTTCCAGTTGACCAAACACATGGAAACTCATGCTGGAGAAATTCTTTTCACTTGTGATGTATGTTCTGCGAAATTTCGATACAAAACGTTGCTGACTGCTCACATGGGATTTCATAAAACTGAAAAATTTAAGTCGGCTCAAGAGTTGAATCAGCAAAATGAGTTAAAATTTTAA
Protein Sequence: MYLEFQIDENDCHPESYLFQSIDFVKQEENNSMSEEITIVPEPDAVKTDTTLSENSIAKRTRSKRTPKSSPKTTNPKNKTKKVNPKSITLKSKKFAKSTLQIDPAEVYTCEVCSAKFQRKGNFNKHKLVHTGEKPYGCDLCSLQFNQNSSLKRHMHTHSEEKPYACSMCPWKFRLNHQLQSHLNTHMEEKRYTCDVCSKKFRQKHSLRRHLGIHFNERPFSCDICFRSFREKTQMKIHKRIHSGEQPYACEICPAKFRVRGLLNRHRLAHAEEKPYACNFCPATFHLKSRYKTHMLIHTGEKPYQCDVCSVQFRHKCSLNKHTLIHTGEKPYTCQVCLKQFREKGTLDKHMVVHMEANDLQEVPTEETPKNESMWKTFKCDKCAMEFVNESSLATHSKKYKFNCDVCPKCFISRQGLWYHLKSFSCTLCAYKTRYKSSLNRHARVHTREKPFACDLCSATFREQGHLKRHSRIHTGEKRYTCDVCSAKFREKSTLRQHIIIHTGEKPYTCSVCAANFRQQNHLDRHMVIHNGEKSYACQICSLEFHGLMTGQKHLVKRRWKRPRSQRIKKDYYPKNWVCEICSAKFAFKSGLARHVVLHTDERPYSHKRSHRQPKPFICKICKSRHHTDLGLRLHMRIHTHKFPFTCVTCLMTFNKRFHLVNHIKSHIDEKNSKKKIFTCEICSWKCNRKFQLTKHMETHAGEILFTCDVCSAKFRYKTLLTAHMGFHKTEKFKSAQELNQQNELKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00378391;
90% Identity: iTF_00378391;
80% Identity: iTF_00378391;