Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776271.1:2320358-2324416[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.27 19 6.7 0.2 2 23 76 98 75 98 0.95

2 25 2.9 2e+02 3.4 0.9 3 23 125 145 123 145 0.91

3 25 1.3 92 4.5 0.6 1 17 149 165 149 172 0.74

4 25 0.56 39 5.7 0.4 1 22 176 197 176 197 0.95

5 25 0.068 4.7 8.6 0.8 1 23 204 227 204 227 0.93

6 25 0.0025 0.17 13.1 2.7 1 23 234 257 234 257 0.97

7 25 0.00023 0.016 16.3 1.1 1 23 262 284 262 284 0.97

8 25 0.00045 0.031 15.4 0.9 1 23 290 312 290 312 0.93

9 25 0.0055 0.38 12.0 1.3 1 14 318 331 318 333 0.92

10 25 5.8 4e+02 2.5 1.0 3 23 346 367 344 367 0.83

11 25 0.91 63 5.0 0.0 2 23 394 416 393 416 0.93

12 25 0.011 0.78 11.0 0.7 1 23 442 464 442 464 0.97

13 25 0.0031 0.22 12.8 0.3 1 23 468 491 468 491 0.97

14 25 0.0096 0.67 11.2 1.4 1 21 495 515 495 516 0.94

15 25 0.0096 0.66 11.2 0.7 3 23 538 559 537 559 0.96

16 25 0.33 23 6.4 0.1 2 23 584 606 583 606 0.93

17 25 0.17 12 7.3 1.3 3 23 631 651 630 651 0.97

18 25 0.01 0.7 11.2 3.6 1 21 655 675 655 676 0.95

19 25 0.07 4.8 8.5 0.2 1 23 717 740 717 740 0.93

20 25 0.56 39 5.7 0.4 2 23 766 788 765 788 0.95

21 25 0.0082 0.57 11.4 0.5 2 23 812 833 811 833 0.94

22 25 0.0033 0.23 12.7 0.0 1 23 837 860 837 860 0.97

23 25 0.44 30 6.0 0.5 1 23 864 887 864 887 0.97

24 25 0.00037 0.026 15.7 3.8 1 23 926 949 926 949 0.97

25 25 0.028 2 9.8 0.5 1 23 959 982 959 982 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.27	19	6.7	0.2	2	23	76	98	75	98	0.95
2	25	2.9	2e+02	3.4	0.9	3	23	125	145	123	145	0.91
3	25	1.3	92	4.5	0.6	1	17	149	165	149	172	0.74
4	25	0.56	39	5.7	0.4	1	22	176	197	176	197	0.95
5	25	0.068	4.7	8.6	0.8	1	23	204	227	204	227	0.93
6	25	0.0025	0.17	13.1	2.7	1	23	234	257	234	257	0.97
7	25	0.00023	0.016	16.3	1.1	1	23	262	284	262	284	0.97
8	25	0.00045	0.031	15.4	0.9	1	23	290	312	290	312	0.93
9	25	0.0055	0.38	12.0	1.3	1	14	318	331	318	333	0.92
10	25	5.8	4e+02	2.5	1.0	3	23	346	367	344	367	0.83
11	25	0.91	63	5.0	0.0	2	23	394	416	393	416	0.93
12	25	0.011	0.78	11.0	0.7	1	23	442	464	442	464	0.97
13	25	0.0031	0.22	12.8	0.3	1	23	468	491	468	491	0.97
14	25	0.0096	0.67	11.2	1.4	1	21	495	515	495	516	0.94
15	25	0.0096	0.66	11.2	0.7	3	23	538	559	537	559	0.96
16	25	0.33	23	6.4	0.1	2	23	584	606	583	606	0.93
17	25	0.17	12	7.3	1.3	3	23	631	651	630	651	0.97
18	25	0.01	0.7	11.2	3.6	1	21	655	675	655	676	0.95
19	25	0.07	4.8	8.5	0.2	1	23	717	740	717	740	0.93
20	25	0.56	39	5.7	0.4	2	23	766	788	765	788	0.95
21	25	0.0082	0.57	11.4	0.5	2	23	812	833	811	833	0.94
22	25	0.0033	0.23	12.7	0.0	1	23	837	860	837	860	0.97
23	25	0.44	30	6.0	0.5	1	23	864	887	864	887	0.97
24	25	0.00037	0.026	15.7	3.8	1	23	926	949	926	949	0.97
25	25	0.028	2	9.8	0.5	1	23	959	982	959	982	0.90

Sequence Information

Coding Sequence: ATGGCGAAACGGAATGCCGAAGTTGTGTTACAGTATTCCACACTGTACCCGTTCAGGTTGCGCGGCAAAAACTTGATGTGCGTTTACTGCTGTGACGAAATTGAAGACCCGGACGAGTACAGATGTCATATGGATGAGACGCATAAAACGGTCGAGCTGTCGATAGCTTTCGCCCACACTAAATGTAGAGATAGGGATTACTTGAAAGTCGACTGCCTTAATTTGAAGTGCAGACTGTGTAGAGAACCTTTCGATACAATAGCTGAAATGGCTCAACATCTTTTAAAGCGACATGAGAGCAAAATTAAAGACATGGACTTAGACTATGAAATAGGTTTACACCCGTATCGTCTAGTTAAAGACAAATTGTTCTGCCTTGTATGCAACATGAAGCAGCCGACTTTAACTAGACTCACGAGGCACATGTCTTCGCATTATGCAGACTACTCGTGTGAAATTTGCGAGAAAAGCTATTTAAACGTGGAAAGCTTAAGATTTCACGTCAAGTTTAGCCATTctgataaatatatttgtaggAAATGCATGACGGAGTTCACCACGGCAGATGAAAGAAAGGAGCATTTGAAAACATCTTCAAAGTGTTGGGGGTTTGCTTGTGTTCTTTGTAAGGAAAGATTCTCTTCTTGGGAGCGTAAGCAGAGGCATTTGGTCAGCAAACATAACGTTCAGGCTTTGTCGTATCCGTGCTCGGACTGCGGGGTAGTTTTTAAATCGAGAGTCCGCTTCTatcatcattataataaaacacacTCTGACCTTGCGCACATTTGCTCGTTTTGCGGTAAAAAGTTTGGAAATAAAGGATTGCTAGACGATCATCAGATTACTCATACCCATGAAAAACAATTCCGGTGTAATGTTTGTTTAAAAGATTTCTCTAGAAACAAAGGTTTGCGAGATCATATGTGGACGCACAGCGACAAAAAGAGATATCCTTGCACGATTTGCGATAAGACATTTAGTCAGAAATATTCGACACTATATCCGTTCAGATTGCGAGGAAAAATCTTGATCTGCGTTTACTGCTGCGACGAATTTGAAGATCCTGACACGTATCGCCATCATATGGATTCAACGCACAAGAAAGCGATTCTGTACACTGCGTTTGCGCATACCGGCAGAAACAGAGACTATTTGAAAGTAGACTGCGTCAATCTTAAATGCAGGCTGTGCGATGCGCCCTTTGGAACAGTTGCTGAAGTAGCCAACCACCTAAAAGATACCCACTTAAATGAAGACATCCAGCAGATGAACTTGAGTTTTGAAGTTGGCTTGCATCCGTACCGTTTAACTAAAAACAAGTTCTTTTGTGTCATATGCAATGTGAAACTGCCGTCATTGACAAAGCTCCGTAGGCATATGTCGTCGCATTACGCAGATTATGTTTGTGATATATGCGGTCGAAGCTACTTGAAAGTTGACAATTTACAATATCACGTCAAGTCGACGCACTCGGGACAACACCCCTGTAGGAAATGCTGGAAAGTTTTTCCGACAAAGGAAGAGAAGAAACAACATAGGCGTAATGCCGAACTGATTCTCAAACACTCCACTGCTTATCCATTCAAAACTCGTTTCAGTCAAATTCTATGCGCTTTCTGTCACGAAGAATACAACACATTGTCCGAATTACGTTATCACATGTCAGTAGATCATGTAAATTCTGATTATAGCAATGTCTTCTATAGAAttaatgataatttaattaaagttgACATAACagatttaaaatgtaaaatatgcTCTCAAGAAATTCCTGATGTAGACACATTGATGAATCATTTGTCACAGTTACATCAAAAACCAGTGAAATTTAATGCGCGTTTCGGAGTGCTGCCGTACAAACAAAATTCTGAAAACCAGTGGCTATGTGTCTACTGTCAGAGACATTACGCCGAGTTTGTTTCATTTAAACGCCATATAGGCACACATTTTATGCACTTCTGCTGTGATAAATGCGGTACTACTTTCGTATCTGATCATGCGTTGCGCGATCACCATCGCCAAGTTAAATGCTTCCGAACTGCTTACCATCCACGCAATGGAAAAATCATGAGATCTCGTGGCAACGCAGAAATTATCCTGCAATGTTCTACCGCATGCCCGTTTAGGACGTGGAAGAATAATTTCAATTGCGTCTTTTGTCGGATTCAGACAAATGATCCCAGCAGCTTAAGAATGCATATGGCAGCTCGCCACGCTAACTATGATGTTCAAGCTGCATTCTATAAGAAACTAGGTAAAGACTTCCTCAGCGTAGATATAACAGATCTTCAATGTAAACTCTGCTTTGTGCCTATACCAACGATCGACTCTCTTACACACCATTTAAAAAATGATCACCAACAACCATTAAACTTAGAGGCTCAATTAGGTTTGCTACCCTTCATATTAAGCGACGGTTCTATATGGAAATGTACTATCTGTCCGAATCAATTCAAAGATTTCATATCGTTAAAAAAGCATACAGCAgaccattttcaaaattatgtttGTGATGCTTGCGGTGAAGGATTTATAACGGAATCTGCAATGATAGCGCACACAAAGATACcacatgaaaataaatatagctgTAGTCGGTGCATTGCAACGTTTTCATCTTTAGATGAAAGAAATATCCATGTAAAGACGCAACACACTTCAATGCCTTATATGTGCATCTACTGCACTGAGAAGCCTCGCTTTGCCAATTGGGAATTACGAAAGAAACATCTCATGGAAGTTCACAACTATAGAACAGGAGCTGATAAATACGAATGCACCACCTGCCAAAAAACCTTCAAGACAAGATCTGGGAAATTCAATCATATGTCGAGAactcataaaattaaaaaagatgCCGATCTCAACTATCCTTGTATTAGTTGTCCAAAAGCATTTACAACTAAACTGTTTTTAGACAAACACATGGCTAAGAAGCATTTCGATATTTGA
Protein Sequence: MAKRNAEVVLQYSTLYPFRLRGKNLMCVYCCDEIEDPDEYRCHMDETHKTVELSIAFAHTKCRDRDYLKVDCLNLKCRLCREPFDTIAEMAQHLLKRHESKIKDMDLDYEIGLHPYRLVKDKLFCLVCNMKQPTLTRLTRHMSSHYADYSCEICEKSYLNVESLRFHVKFSHSDKYICRKCMTEFTTADERKEHLKTSSKCWGFACVLCKERFSSWERKQRHLVSKHNVQALSYPCSDCGVVFKSRVRFYHHYNKTHSDLAHICSFCGKKFGNKGLLDDHQITHTHEKQFRCNVCLKDFSRNKGLRDHMWTHSDKKRYPCTICDKTFSQKYSTLYPFRLRGKILICVYCCDEFEDPDTYRHHMDSTHKKAILYTAFAHTGRNRDYLKVDCVNLKCRLCDAPFGTVAEVANHLKDTHLNEDIQQMNLSFEVGLHPYRLTKNKFFCVICNVKLPSLTKLRRHMSSHYADYVCDICGRSYLKVDNLQYHVKSTHSGQHPCRKCWKVFPTKEEKKQHRRNAELILKHSTAYPFKTRFSQILCAFCHEEYNTLSELRYHMSVDHVNSDYSNVFYRINDNLIKVDITDLKCKICSQEIPDVDTLMNHLSQLHQKPVKFNARFGVLPYKQNSENQWLCVYCQRHYAEFVSFKRHIGTHFMHFCCDKCGTTFVSDHALRDHHRQVKCFRTAYHPRNGKIMRSRGNAEIILQCSTACPFRTWKNNFNCVFCRIQTNDPSSLRMHMAARHANYDVQAAFYKKLGKDFLSVDITDLQCKLCFVPIPTIDSLTHHLKNDHQQPLNLEAQLGLLPFILSDGSIWKCTICPNQFKDFISLKKHTADHFQNYVCDACGEGFITESAMIAHTKIPHENKYSCSRCIATFSSLDERNIHVKTQHTSMPYMCIYCTEKPRFANWELRKKHLMEVHNYRTGADKYECTTCQKTFKTRSGKFNHMSRTHKIKKDADLNYPCISCPKAFTTKLFLDKHMAKKHFDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00856920;
90% Identity: iTF_00856920;
80% Identity: -