Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776273.1:493735-501682[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.013 0.92 10.8 1.3 1 20 174 193 174 195 0.94

2 23 6.7e-05 0.0046 18.0 0.8 1 23 201 223 201 223 0.98

3 23 2.3e-05 0.0016 19.5 2.2 1 23 246 269 246 269 0.94

4 23 3.3e-09 2.3e-07 31.6 0.4 1 23 275 298 275 298 0.98

5 23 0.0023 0.16 13.2 2.7 1 23 304 326 304 326 0.98

6 23 0.00041 0.029 15.5 0.6 3 23 347 368 345 368 0.93

7 23 2.2e-05 0.0015 19.5 3.0 1 23 374 397 374 397 0.95

8 23 0.0032 0.22 12.7 0.6 1 23 403 425 403 425 0.96

9 23 0.0026 0.18 13.0 0.4 1 23 431 453 431 453 0.97

10 23 0.0068 0.47 11.7 0.7 1 23 475 498 475 498 0.95

11 23 1.4e-06 0.0001 23.3 0.4 1 23 504 527 504 527 0.97

12 23 7.8e-07 5.4e-05 24.1 1.4 2 23 534 555 533 555 0.97

13 23 0.0069 0.48 11.7 0.9 1 23 575 598 575 598 0.95

14 23 1.4e-05 0.001 20.1 2.4 1 23 604 627 604 627 0.98

15 23 0.00014 0.0097 17.0 2.4 1 23 645 667 645 667 0.98

16 23 0.017 1.2 10.4 1.2 1 23 673 696 673 696 0.91

17 23 0.00042 0.029 15.5 1.8 1 23 702 724 702 724 0.98

18 23 0.0045 0.31 12.3 0.4 2 23 731 752 730 752 0.95

19 23 2e-05 0.0014 19.7 2.5 1 23 758 780 758 780 0.98

20 23 4.3e-06 0.00029 21.8 0.4 3 23 788 808 786 808 0.98

21 23 0.0001 0.0071 17.4 2.4 1 23 814 837 814 837 0.92

22 23 0.00019 0.013 16.6 4.3 1 23 843 865 843 865 0.98

23 23 0.00043 0.03 15.5 1.2 1 23 871 894 871 894 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.013	0.92	10.8	1.3	1	20	174	193	174	195	0.94
2	23	6.7e-05	0.0046	18.0	0.8	1	23	201	223	201	223	0.98
3	23	2.3e-05	0.0016	19.5	2.2	1	23	246	269	246	269	0.94
4	23	3.3e-09	2.3e-07	31.6	0.4	1	23	275	298	275	298	0.98
5	23	0.0023	0.16	13.2	2.7	1	23	304	326	304	326	0.98
6	23	0.00041	0.029	15.5	0.6	3	23	347	368	345	368	0.93
7	23	2.2e-05	0.0015	19.5	3.0	1	23	374	397	374	397	0.95
8	23	0.0032	0.22	12.7	0.6	1	23	403	425	403	425	0.96
9	23	0.0026	0.18	13.0	0.4	1	23	431	453	431	453	0.97
10	23	0.0068	0.47	11.7	0.7	1	23	475	498	475	498	0.95
11	23	1.4e-06	0.0001	23.3	0.4	1	23	504	527	504	527	0.97
12	23	7.8e-07	5.4e-05	24.1	1.4	2	23	534	555	533	555	0.97
13	23	0.0069	0.48	11.7	0.9	1	23	575	598	575	598	0.95
14	23	1.4e-05	0.001	20.1	2.4	1	23	604	627	604	627	0.98
15	23	0.00014	0.0097	17.0	2.4	1	23	645	667	645	667	0.98
16	23	0.017	1.2	10.4	1.2	1	23	673	696	673	696	0.91
17	23	0.00042	0.029	15.5	1.8	1	23	702	724	702	724	0.98
18	23	0.0045	0.31	12.3	0.4	2	23	731	752	730	752	0.95
19	23	2e-05	0.0014	19.7	2.5	1	23	758	780	758	780	0.98
20	23	4.3e-06	0.00029	21.8	0.4	3	23	788	808	786	808	0.98
21	23	0.0001	0.0071	17.4	2.4	1	23	814	837	814	837	0.92
22	23	0.00019	0.013	16.6	4.3	1	23	843	865	843	865	0.98
23	23	0.00043	0.03	15.5	1.2	1	23	871	894	871	894	0.96

Sequence Information

Coding Sequence: ATGTCCGATGAAGAGTTGTGCAGAGTGTGCCTCGCGGAGAACAGAAGGATGTATCCGATCAGCAGCTCCCGGTATCAGGAGATGTATGAGAAACTAACGGGCGGACCGcTGTTGTCCGGAGATGGTAGACCTGACTGCCTGTGCAGCCTGTGCCTCACCATGGTGCAGAGGTGCTGGAGATTCTTCCACATGTCACAGAAGTCGGAGGAGAACCTCAACAAACTACTAGCATATGGAGTCAAGtttaCTCGTCTGTCGGTGGCTCTGGTTGATAAAGTGAATGTCCACAACCTGTCAGTCACGTCAGTCACGCACACGTCAGTATTTGACAATGTGAAGGAGGAAGCGGAAGTGGCGGTCAAACTGGAGATGTTTTCTGAAGAAGAGAAGAATATTGATGAGATTGATGATGTCCCTGCGCAAGAGTCGAACGACGAAGACTCCGAGTCAGATCCGTTGGAAGCGGTTGAAATTGTCGACGTGAAAATAGAATCCATCACAGAAACGAATGCCTCAACTTACTCCTGCGCAGTATGCCCGCGCCGCTTCAACTCTTCAAGAGAATTGGACCAACACAAAAATTGTGTTCATAAAACAAGATACCAATGTAAAAAGTGTAGTGAAGTGTTTGCAAACTCAGCTGTCCTGAAATTACATATGAAATTTCACGCTGAACAAAAATCTGTAGATAGTGATAATGTCAATGACAGTTTTATAGATTTCACCGGTGAGAAATTTGCATGTGTGCTTTGTAAGAAGACTTTCACACAGAAAGGACATTTAAAAACACATATAATGGCATTTCACACCGGGGAAAGGCCATATGCCTGCCCCATATGCGACAAGAGATTCGTGCAGAATAGTAATCTCAGAACTCATATGCGTACAGCTCATGTTAAGGAGAAACCGTTCACTTGTACCACTTGTAAGGGTGTGTGTGTTGACGAGAGCCATCTTAAGGAACATATGAGTATCCATAGCGGTGACAATCAGACCATCAATGATGGGAATGATGATAGAGTCGAAAAGCCATTTGGTTGTGGCCGGTGTGGGAAAACATTCACAGCGAAAGCCCATTTGAAATCACATGTCATGGCCATTCATACGGGAGAGCGCCCATTCGCGTGTACCATGTGTGATAAAAAGTACACGCAAAAAAGTCACCTAAGGTTACACGCGAGGTTGTCACACGTTGTGGAAAAACCATTCGCATGTCTCGATTGTGAAATGAGATTTGACAGTGAAAACGATTTGAAAAAACACTCCACAACCCATACGGATATTAAGTCATTCTCTTGTGCTATCTGCAATAAGTTATTCCTATCAGAAAACAACTTAAAGAAACATATGGTTGTACATAGTGGGACGTTGTTGCCGAGCGATGTTGAGGAGATTGAAAGAGATGAGGTGAAAGTCAAGCCGTTCCCCTGTGTGTTATGCAGCAAGAGATTCGGATGGAAATCGCATTTAAAGTCTCATATAATGGCAATCCACACAGGAGAAAGGCCATATTCCTGCTCTGTATGCGACAAGAGATTTGTACAAAGAAGTAATTTAAGATTACACGCTAAAGTAGCGCATGGGATTATTAAACCTTTGACATGCGAATTGTGTAATAAAGCGTTTAGGAAAGAAAGCAATTTGCAGAAGCATATGACTACGCATAGCGGAGAAGTGTCAATAGATACTGAAGTAGAAGATGATATGTCCAAGTCAAAGCCATTCCCTTGTGTGTTATGCAGCAAGAGATTCGGTTGGAAATCGCATTTGAAAACTCATATAATGGCGCTTCATACTGGGGAACGCCCTTTTTCATGTTCCATATGCGATAAAAAATTTGTACAAAAAAGCTATTTGAGATTTCACATGAAAACTATACACCCCGGAGACCGAGCTACCCAGATCATGCTCAACAGTGATGAGGGGAAACCATTCACTTGCAAACTTTGTTCtgttaaatttattaacaaaaccAGCTTAGAAAAGCATCGGAGACTACACACCGACGCGCCGCCATTTAAATGTATCAGATGCGATAAAAAATTCAGCACAAAAGTCGATCTAGACTCCCACAACTTAAGTCTACACGCTACTGAACTACCATATAATTGTGAGACTTGTAAATCGAGATTTGAAGATCAGAACGCGTTGAAAAAACATCAGTCAACACACACCGACGCCAAACCGTTGTCTTGTGAGACTTGCAACAGAACTTTCCTAGCTCGCAGTGCTTTAAGAAGACATATGGTCATTCATAGCGATGAAAAACCATTCTCGTGCAAGATATgcaaaaaatctttcaaacAGGACAGAGTTTTGAGAAAACATATGCAAATACACACCGAGGAGAAGAAATTTGGATGTGATGTGTGCGATAGGAAATTTTATCAACGTGGGAACTTAATCAGTCATATGAGGATTCATTCTGGAGAGAAACCCTTTGTGTGTGACCGATGCGGGAACAGTTTTAATCAGAAGAGTCATTTAAGAACGCATGTGCTGTTTATGCATACCACAGACAAGCCATTCTCTTGCGGGTTGTGTAATAAGAAATTCAGGTTGAAGAGTTGTCTTCGGAACCACCAGATGGTACATACTGGTGAACGACCATACCCGTGCAATAGTTGTGATAAAAAGTACTATAAGAAAGGTGAATTGAAATCTCATGTCTTGAAAATGCATTCTTGA
Protein Sequence: MSDEELCRVCLAENRRMYPISSSRYQEMYEKLTGGPLLSGDGRPDCLCSLCLTMVQRCWRFFHMSQKSEENLNKLLAYGVKFTRLSVALVDKVNVHNLSVTSVTHTSVFDNVKEEAEVAVKLEMFSEEEKNIDEIDDVPAQESNDEDSESDPLEAVEIVDVKIESITETNASTYSCAVCPRRFNSSRELDQHKNCVHKTRYQCKKCSEVFANSAVLKLHMKFHAEQKSVDSDNVNDSFIDFTGEKFACVLCKKTFTQKGHLKTHIMAFHTGERPYACPICDKRFVQNSNLRTHMRTAHVKEKPFTCTTCKGVCVDESHLKEHMSIHSGDNQTINDGNDDRVEKPFGCGRCGKTFTAKAHLKSHVMAIHTGERPFACTMCDKKYTQKSHLRLHARLSHVVEKPFACLDCEMRFDSENDLKKHSTTHTDIKSFSCAICNKLFLSENNLKKHMVVHSGTLLPSDVEEIERDEVKVKPFPCVLCSKRFGWKSHLKSHIMAIHTGERPYSCSVCDKRFVQRSNLRLHAKVAHGIIKPLTCELCNKAFRKESNLQKHMTTHSGEVSIDTEVEDDMSKSKPFPCVLCSKRFGWKSHLKTHIMALHTGERPFSCSICDKKFVQKSYLRFHMKTIHPGDRATQIMLNSDEGKPFTCKLCSVKFINKTSLEKHRRLHTDAPPFKCIRCDKKFSTKVDLDSHNLSLHATELPYNCETCKSRFEDQNALKKHQSTHTDAKPLSCETCNRTFLARSALRRHMVIHSDEKPFSCKICKKSFKQDRVLRKHMQIHTEEKKFGCDVCDRKFYQRGNLISHMRIHSGEKPFVCDRCGNSFNQKSHLRTHVLFMHTTDKPFSCGLCNKKFRLKSCLRNHQMVHTGERPYPCNSCDKKYYKKGELKSHVLKMHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00377675;
90% Identity: iTF_00377675;
80% Identity: iTF_00377675;